Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0045F.1_g026530 Hydrangea macrophylla HOM05D000963 ORTHO05D005131 5.0e-54 214.2 105 100.0
DCAR_001146 Daucus carota HOM05D000963 ORTHO05D005131 4.1e-32 141.4 84 84.5
DCAR_032037 Daucus carota HOM05D000963 ORTHO05D005131 4.1e-32 141.4 84 84.5
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 4.1e-32 141.4 84 84.5
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 4.1e-32 141.4 84 84.5
ECA169G0003 Erigeron canadensis HOM05D000963 ORTHO05D005131 4.1e-32 141.4 84 84.5
SGA_v2.0_scaffold893G53701 Striga asiatica HOM05D000963 ORTHO05D005131 9.1e-32 140.2 84 83.3
unitig_87.g28036 Utricularia gibba HOM05D000963 ORTHO05D005131 2.6e-31 138.7 84 83.3
vmacro22396 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 4.5e-31 137.9 84 83.3
vmacro22416 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 4.5e-31 137.9 84 83.3
vmacro22421 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 4.5e-31 137.9 84 83.3
Oeu039801.1 Olea europaea HOM05D000963 ORTHO05D005131 7.7e-31 137.1 85 83.5
BcaNung01517 Brassica carinata HOM05D000963 ORTHO05D005131 1.0e-30 136.7 85 83.5
RhsimPtG0005500 Rhododendron simsii HOM05D000963 ORTHO05D005131 1.0e-30 136.7 84 82.1
unitig_8.g4106 Utricularia gibba HOM05D000963 ORTHO05D005131 1.3e-30 136.3 84 83.3
PGSC0003DMG400020295 Solanum tuberosum HOM05D000963 ORTHO05D005131 2.9e-30 135.2 87 80.5
Sc03g0007080 Simmondsia chinensis HOM05D000963 ORTHO05D005131 3.8e-30 134.8 84 82.1
PGSC0003DMG400018892 Solanum tuberosum HOM05D000963 ORTHO05D005131 1.2e-28 129.8 84 79.8
SHI37614 Sapria himalayana HOM05D000963 ORTHO05D005131 3.6e-28 128.3 84 78.6
SHI47131 Sapria himalayana HOM05D000963 ORTHO05D005131 1.8e-24 115.9 73 78.1
PGSC0003DMG400046976 Solanum tuberosum HOM05D000963 ORTHO05D005131 2.0e-23 112.5 87 71.3
SHI42531 Sapria himalayana HOM05D000963 ORTHO05D005131 2.7e-23 112.1 73 78.1
SHI36398 Sapria himalayana HOM05D000963 ORTHO05D005131 5.0e-22 107.8 78 74.4
Gohir.D03G074448 Gossypium hirsutum HOM05D000963 ORTHO05D005131 6.5e-22 107.5 66 83.3
Gohir.A09G101420 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.5e-21 106.3 66 83.3
Oeu015125.1 Olea europaea HOM05D000963 ORTHO05D010201 1.5e-21 106.3 85 67.1
CAN.G1185.10 Capsicum annuum HOM05D000963 ORTHO05D004715 3.2e-21 105.1 85 68.2
DCAR_001525 Daucus carota HOM05D000963 ORTHO05D005131 1.4e-19 99.8 63 81.0
Gohir.A12G092444 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.8e-19 99.4 66 75.8
Medtr7g093213 Medicago truncatula HOM05D000963 ORTHO05D005131 8.8e-11 70.5 41 82.9
Sc25g0002260 Simmondsia chinensis HOM05D000963 ORTHO05D005131 1.7e-09 66.2 41 78.0
ECA234G4679 Erigeron canadensis HOM05D000476 ORTHO05D004793 8.3e-09 63.9 37 81.1
Potri.007G062061 Populus trichocarpa HOM05D010604 ORTHO05D012476 3.1e-08 62.0 108 41.7
arahy.Tifrunner.gnm1.ann1.MJQ8WH Arachis hypogaea HOM05D000963 ORTHO05D011117 1.2e-07 60.1 104 42.3
DCAR_018748 Daucus carota HOM05D003334 ORTHO05D004076 2.7e-07 58.9 39 74.4
Nitab4.5_0000017g0110 Nicotiana tabacum HOM05D000963 ORTHO05D005131 5.9e-07 57.8 35 77.1
Gohir.A13G086560 Gossypium hirsutum HOM05D000963 ORTHO05D005131 7.7e-07 57.4 45 66.7
vmacro09305 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 7.7e-07 57.4 50 62.0
Dinv39831 Davidia involucrata HOM05D000963 ORTHO05D004715 1.0e-06 57.0 35 80.0
SalBow6G4874 Salvia bowleyana HOM05D000963 ORTHO05D005131 1.0e-06 57.0 35 80.0
Sc05g0004060 Simmondsia chinensis HOM05D000963 ORTHO05D005131 1.0e-06 57.0 35 80.0
PGSC0003DMG400036067 Solanum tuberosum HOM05D000963 ORTHO05D001540 1.0e-06 57.0 35 80.0
TAR365G0238 Trochodendron aralioides HOM05D001325 ORTHO05D001540 1.0e-06 57.0 35 80.0
unitig_87.g27920 Utricularia gibba HOM05D000963 ORTHO05D001540 1.0e-06 57.0 35 80.0
unitig_91.g26518 Utricularia gibba HOM05D001325 ORTHO05D001540 1.0e-06 57.0 35 80.0
unitig_91.g26528 Utricularia gibba HOM05D000963 ORTHO05D005131 1.0e-06 57.0 35 80.0
EL10As6g23662 Beta vulgaris HOM05D001325 ORTHO05D001540 1.3e-06 56.6 35 77.1
Hund25913 Selenicereus undatus HOM05D000963 ORTHO05D005131 1.3e-06 56.6 35 77.1
EL10As10g23961 Beta vulgaris HOM05D000963 ORTHO05D005131 2.3e-06 55.8 43 67.4
Migut.D01379 Erythranthe guttata HOM05D000963 ORTHO05D005131 2.3e-06 55.8 43 67.4
Sc25g0002000 Simmondsia chinensis HOM05D000963 ORTHO05D005131 2.3e-06 55.8 43 67.4
arahy.Tifrunner.gnm1.ann1.KZ3I51 Arachis hypogaea HOM05D010604 ORTHO05D012476 3.8e-06 55.1 46 58.7
Cfa010543 Carpinus fangiana HOM05D000963 ORTHO05D005131 5.0e-06 54.7 36 75.0
Gohir.D10G125850 Gossypium hirsutum HOM05D000963 ORTHO05D005131 5.0e-06 54.7 35 80.0
Gohir.D04G090233 Gossypium hirsutum HOM05D000963 ORTHO05D005131 6.6e-06 54.3 35 77.1
Gorai.012G100900 Gossypium raimondii HOM05D000963 ORTHO05D005131 6.6e-06 54.3 35 77.1
MBI13_g30267_MAGBIO Magnolia biondii HOM05D000571 ORTHO05D000435 6.6e-06 54.3 35 77.1
Gohir.D02G117532 Gossypium hirsutum HOM05D000963 ORTHO05D005131 8.6e-06 53.9 66 51.5
Sc05g0004130 Simmondsia chinensis HOM05D000963 ORTHO05D005131 8.6e-06 53.9 43 65.1


User provided reference genes

Program Settings