Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0044F.1_g026360 Hydrangea macrophylla HOM05D007982 ORTHO05D010255 1.2e-308 1062.4 541 100.0
Dinv07497 Davidia involucrata HOM05D007982 ORTHO05D010255 9.9e-199 697.2 502 72.1
CSS0047094 Camellia sinensis var. sinensis HOM05D007982 ORTHO05D010255 4.6e-196 688.3 522 69.2
Cfa018656 Carpinus fangiana HOM05D007982 ORTHO05D010255 4.6e-188 661.8 464 69.8
RhsimUnG0103100 Rhododendron simsii HOM05D007982 ORTHO05D010255 3.3e-186 655.6 454 71.8
GSVIVG01034385001 Vitis vinifera HOM05D007982 ORTHO05D010255 9.0e-184 647.5 463 71.1
QL01p000856 Quercus lobata HOM05D007982 ORTHO05D010255 1.2e-183 647.1 456 69.5
MD13G1002800 Malus domestica HOM05D007982 ORTHO05D010255 3.1e-176 622.5 467 65.3
COL.COLO4_02959 Corchorus olitorius HOM05D007982 ORTHO05D010255 9.1e-176 620.9 487 62.0
PGR142G3837 Punica granatum HOM05D007982 ORTHO05D010255 3.4e-175 619.0 465 66.2
Nn4g25166 Nelumbo nucifera HOM05D007982 ORTHO05D010255 1.3e-174 617.1 461 66.2
Thecc.02G154200 Theobroma cacao HOM05D007982 ORTHO05D010255 5.0e-174 615.1 477 63.9
Sopen04g004060 Solanum pennellii HOM05D007982 ORTHO05D010255 2.7e-172 609.4 466 63.3
Prupe.1G349600 Prunus persica HOM05D007982 ORTHO05D010255 3.6e-172 609.0 499 62.5
Nitab4.5_0003038g0010 Nicotiana tabacum HOM05D007982 ORTHO05D010255 3.0e-171 605.9 466 62.9
Solyc04g008880.4 Solanum lycopersicum HOM05D007982 ORTHO05D010255 3.0e-171 605.9 463 63.5
Peaxi162Scf00681g00437 Petunia axillaris HOM05D007982 ORTHO05D010255 2.0e-170 603.2 466 62.2
Migut.E00677 Erythranthe guttata HOM05D007982 ORTHO05D010255 3.3e-170 602.4 457 66.1
Nitab4.5_0001379g0110 Nicotiana tabacum HOM05D007982 ORTHO05D010255 1.7e-169 600.1 463 62.4
MBI06_g27478_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 6.9e-168 594.7 475 63.2
PGSC0003DMG400025302 Solanum tuberosum HOM05D007982 ORTHO05D010255 6.9e-168 594.7 508 58.7
Ciclev10031355m.g Citrus clementina HOM05D007982 ORTHO05D010255 1.0e-166 590.9 501 61.3
Aqoxy3G04317 Aquilegia oxysepala HOM05D007982 ORTHO05D010255 3.2e-165 585.9 492 60.2
Gohir.A12G132500 Gossypium hirsutum HOM05D007982 ORTHO05D010255 1.9e-157 560.1 482 58.5
Gohir.D12G136100 Gossypium hirsutum HOM05D007982 ORTHO05D010255 4.2e-157 558.9 484 58.1
Gorai.008G147300 Gossypium raimondii HOM05D007982 ORTHO05D010255 1.6e-156 557.0 484 57.9
CANSAT78G2255 Cannabis sativa HOM05D007982 ORTHO05D010255 1.2e-151 540.8 412 65.0
Haze_17412 Corylus avellana HOM05D007982 ORTHO05D010255 1.1e-149 534.3 482 57.5
HPP92_015183 Vanilla planifolia HOM05D007982 ORTHO05D010255 3.7e-137 492.7 472 55.3
Actinidia04353 Actinidia chinensis HOM05D007982 ORTHO05D010255 2.4e-136 490.0 363 67.8
Pp3c22_18880 Physcomitrium patens HOM05D007982 ORTHO05D010255 2.5e-109 400.2 483 45.3
SMO259G0034 Selaginella moellendorffii HOM05D007982 ORTHO05D010255 4.1e-104 382.9 494 42.7
Mapoly0001s0484 Marchantia polymorpha HOM05D007982 ORTHO05D010255 1.9e-101 374.0 500 42.4
AagrBONN_evm.TU.Sc2ySwM_362.2345 Anthoceros agrestis HOM05D007982 ORTHO05D010255 4.9e-97 359.4 390 50.3
Atru.chr11.1247 Acer truncatum HOM05D007982 ORTHO05D010255 2.3e-94 350.5 272 63.2
Oeu027929.1 Olea europaea HOM05D007982 ORTHO05D010255 2.5e-93 347.1 433 46.2
Cpa.g.c40876 Carica papaya HOM05D007982 ORTHO05D010255 6.0e-87 325.9 241 64.7
SalBow2G1914 Salvia bowleyana HOM05D007982 ORTHO05D010255 2.2e-68 264.2 214 62.1
MBI14_g28586_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 2.8e-68 263.8 236 59.7
SEGI_18232 Sequoiadendron giganteum HOM05D007982 ORTHO05D010255 3.3e-61 240.4 237 48.9
SEGI_24738 Sequoiadendron giganteum HOM05D007982 ORTHO05D010255 3.3e-61 240.4 237 48.9
MBI17_g03293_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 2.8e-60 237.3 185 64.9
FAN17G1590 Fragaria x ananassa HOM05D007982 ORTHO05D010255 4.8e-60 236.5 319 45.5
Atru.chr11.1266 Acer truncatum HOM05D007982 ORTHO05D010255 1.3e-57 228.4 225 56.4
MBI19_g41559_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 2.2e-57 227.6 182 62.6
MBI09_g17621_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 3.8e-57 226.9 182 63.2
Cpa.g.sc138.6 Carica papaya HOM05D007982 ORTHO05D010255 3.2e-56 223.8 180 63.9
PRCOL_00006233 Prasinoderma coloniale HOM05D007982 ORTHO05D010255 5.5e-56 223.0 499 33.7
MBI09_g40719_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.6e-55 221.5 182 62.1
MBI05_g11582_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 3.0e-54 217.2 174 63.8
MBI04_g26113_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 9.1e-51 205.7 167 62.9
MBI14_g39939_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.5e-50 204.9 177 60.5
FAN12G3848 Fragaria x ananassa HOM05D007982 ORTHO05D010255 8.0e-47 192.6 183 55.7
FvH4_4g37200 Fragaria vesca HOM05D007982 ORTHO05D010255 3.0e-46 190.7 264 43.6
MBI18_g19089_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.6e-42 178.3 180 53.9
MBI18_g03299_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 5.9e-42 176.4 142 60.6
MBI18_g45738_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 2.9e-41 174.1 142 59.9
SEGI_11934 Sequoiadendron giganteum HOM05D007982 ORTHO05D010255 4.2e-40 170.2 240 43.8
MBI09_g45432_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 2.3e-38 164.5 121 66.9
Gohir.D13G112900 Gossypium hirsutum HOM05D007982 ORTHO05D010255 1.5e-37 161.8 161 52.8
Gohir.D03G023166 Gossypium hirsutum HOM05D007982 ORTHO05D010255 8.6e-25 119.4 114 57.0
MBI06_g30604_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.1e-24 119.0 128 50.8
Gorai.003G023800 Gossypium raimondii HOM05D007982 ORTHO05D010255 2.5e-24 117.9 113 55.8
Nitab4.5_0003088g0030 Nicotiana tabacum HOM05D007982 ORTHO05D010293 2.8e-23 114.4 195 37.9
Nitab4.5_0001462g0020 Nicotiana tabacum HOM05D007982 ORTHO05D010255 1.8e-22 111.7 166 44.0
Cpa.g.sc138.10 Carica papaya HOM05D007982 ORTHO05D010255 1.5e-21 108.6 285 29.8
Gohir.D06G142033 Gossypium hirsutum HOM05D007982 ORTHO05D010255 2.2e-20 104.8 83 61.4
Pp3s92_70 Physcomitrium patens HOM05D007982 ORTHO05D034158 4.9e-20 103.6 362 26.2
Cpa.g.sc138.4 Carica papaya HOM05D007982 ORTHO05D010255 1.7e-17 95.1 71 54.9
Nitab4.5_0001462g0030 Nicotiana tabacum HOM05D007982 ORTHO05D286115 5.6e-16 90.1 108 51.9
Nitab4.5_0001297g0080 Nicotiana tabacum HOM05D007982 ORTHO05D010255 3.0e-14 84.3 137 40.9
Nitab4.5_0000082g0440 Nicotiana tabacum HOM05D003015 ORTHO05D003733 7.5e-13 79.7 104 40.4
Gorai.010G165700 Gossypium raimondii HOM05D000288 ORTHO05D000173 4.1e-11 73.9 64 54.7
Nitab4.5_0001269g0080 Nicotiana tabacum HOM05D009415 ORTHO05D008933 4.1e-11 73.9 88 40.9
Nitab4.5_0014613g0010 Nicotiana tabacum HOM05D003277 ORTHO05D003275 1.6e-10 72.0 127 34.6
FAN12G3608 Fragaria x ananassa HOM05D007982 ORTHO05D010255 2.7e-10 71.2 170 33.5
CBR_g32224 Chara braunii HOM05D005554 ORTHO05D007823 6.6e-09 66.6 418 26.6
Nitab4.5_0005642g0050 Nicotiana tabacum HOM05D007982 ORTHO05D283853 2.3e-06 58.2 92 33.7
HPP92_014728 Vanilla planifolia HOM05D005554 ORTHO05D007823 6.8e-06 56.6 370 23.0


User provided reference genes

Program Settings