Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0042F.1_g025650 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 3.3e-158 561.6 276 100.0
Dinv27131 Davidia involucrata HOM05D006155 ORTHO05D007529 1.2e-107 393.7 241 81.7
DCAR_002295 Daucus carota HOM05D006155 ORTHO05D007529 4.6e-107 391.7 239 79.5
CSS0040589 Camellia sinensis var. sinensis HOM05D006155 ORTHO05D007529 2.5e-105 386.0 241 79.7
Actinidia32965 Actinidia chinensis HOM05D006155 ORTHO05D007529 3.3e-105 385.6 245 77.1
Lj6C638T14 Lonicera japonica HOM05D006155 ORTHO05D007529 1.6e-104 383.3 222 82.9
Lju2262C0T14 Lonicera japonica HOM05D006155 ORTHO05D007529 6.2e-104 381.3 222 82.4
Haze_11491 Corylus avellana HOM05D006155 ORTHO05D007529 1.1e-103 380.6 275 69.1
CAN.G812.29 Capsicum annuum HOM05D006155 ORTHO05D007529 2.3e-103 379.4 245 75.5
Lsat_1_v5_gn_1_76101 Lactuca sativa HOM05D006155 ORTHO05D007529 2.3e-103 379.4 246 74.4
Actinidia35935 Actinidia chinensis HOM05D006155 ORTHO05D007529 3.1e-103 379.0 217 82.0
Oeu055271.1 Olea europaea HOM05D006155 ORTHO05D007529 4.0e-103 378.6 248 74.6
Rhsim09G0042400 Rhododendron simsii HOM05D006155 ORTHO05D007529 8.9e-103 377.5 249 75.9
Ciclev10005577m.g Citrus clementina HOM05D006155 ORTHO05D007529 9.8e-102 374.0 267 69.7
Solyc09g090750.3 Solanum lycopersicum HOM05D006155 ORTHO05D007529 1.7e-101 373.2 239 76.2
Sopen09g033690 Solanum pennellii HOM05D006155 ORTHO05D007529 1.7e-101 373.2 226 78.8
PGSC0003DMG400001560 Solanum tuberosum HOM05D006155 ORTHO05D007529 2.2e-101 372.9 226 78.8
MD16G1230400 Malus domestica HOM05D006155 ORTHO05D007529 2.9e-101 372.5 251 71.7
SGA_v2.0_scaffold285G47059 Striga asiatica HOM05D006155 ORTHO05D007529 2.9e-101 372.5 267 70.4
Cfa014810 Carpinus fangiana HOM05D006155 ORTHO05D007529 8.3e-101 370.9 248 72.6
Prupe.1G052300 Prunus persica HOM05D006155 ORTHO05D007529 1.9e-100 369.8 253 70.4
arahy.Tifrunner.gnm1.ann1.NLE1X5 Arachis hypogaea HOM05D006155 ORTHO05D007529 4.1e-100 368.6 244 73.4
Nitab4.5_0003474g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 4.1e-100 368.6 247 74.1
SalBow3G4628 Salvia bowleyana HOM05D006155 ORTHO05D007529 4.1e-100 368.6 231 76.6
Cc03_g06750 Coffea canephora HOM05D006155 ORTHO05D007529 5.4e-100 368.2 233 73.8
Nitab4.5_0002937g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 1.2e-99 367.1 242 75.6
Lalb_Chr02g0150741 Lupinus albus HOM05D006155 ORTHO05D007529 2.0e-99 366.3 278 66.5
Duzib151G0563 Durio zibethinus HOM05D006155 ORTHO05D007529 4.6e-99 365.2 242 71.5
Ah.13g074940 Amaranthus hybridus HOM05D006155 ORTHO05D007529 6.0e-99 364.8 232 74.6
arahy.Tifrunner.gnm1.ann1.L647M7 Arachis hypogaea HOM05D006155 ORTHO05D007529 6.0e-99 364.8 265 68.7
CANSAT78G1287 Cannabis sativa HOM05D006155 ORTHO05D007529 1.0e-98 364.0 258 70.9
GSVIVG01027954001 Vitis vinifera HOM05D006155 ORTHO05D007529 1.0e-98 364.0 230 74.3
Migut.N00320 Erythranthe guttata HOM05D006155 ORTHO05D007529 1.3e-98 363.6 246 73.6
EL10Ac3g06713 Beta vulgaris HOM05D006155 ORTHO05D007529 1.7e-98 363.2 221 76.9
Oeu023143.1 Olea europaea HOM05D006155 ORTHO05D007529 3.0e-98 362.5 224 77.2
Atru.chr4.1882 Acer truncatum HOM05D006155 ORTHO05D007529 3.9e-98 362.1 245 72.2
COL.COLO4_15996 Corchorus olitorius HOM05D006155 ORTHO05D007529 3.9e-98 362.1 215 76.7
MSTRG.24647 Avicennia marina HOM05D006155 ORTHO05D007529 1.1e-97 360.5 253 69.6
RcHm_v2.0_Chr4g0396071 Rosa chinensis HOM05D006155 ORTHO05D007529 1.9e-97 359.8 227 74.4
Thecc.04G268500 Theobroma cacao HOM05D006155 ORTHO05D007529 1.9e-97 359.8 245 70.6
HanXRQChr01g0022501 Helianthus annuus HOM05D006155 ORTHO05D007529 9.5e-97 357.5 252 69.0
Gorai.011G180400 Gossypium raimondii HOM05D006155 ORTHO05D007529 1.2e-96 357.1 273 65.9
Gohir.D10G160700 Gossypium hirsutum HOM05D006155 ORTHO05D007529 2.8e-96 355.9 273 65.6
Peaxi162Scf00125g01318 Petunia axillaris HOM05D006155 ORTHO05D007529 2.8e-96 355.9 247 73.3
TWI09G0038 Tripterygium wilfordii HOM05D006155 ORTHO05D007529 2.8e-96 355.9 247 71.3
Aa31LG5G4150 Aethionema arabicum HOM05D006155 ORTHO05D007529 8.1e-96 354.4 245 66.9
PSO063G0276 Papaver somniferum HOM05D006155 ORTHO05D007529 8.1e-96 354.4 252 67.1
FvH4_4g05140 Fragaria vesca HOM05D006155 ORTHO05D007529 1.1e-95 354.0 242 69.8
Aqoxy2G03758 Aquilegia oxysepala HOM05D006155 ORTHO05D007529 1.4e-95 353.6 214 77.1
A03p18670 Brassica napus HOM05D006155 ORTHO05D007529 1.4e-95 353.6 246 67.1
BolC4t27754H Brassica oleracea HOM05D006155 ORTHO05D007529 1.4e-95 353.6 251 66.1
FAN12G3888 Fragaria x ananassa HOM05D006155 ORTHO05D007529 1.4e-95 353.6 242 69.8
AT2G33255 Arabidopsis thaliana HOM05D006155 ORTHO05D007529 1.8e-95 353.2 249 68.3
Gohir.A10G106500 Gossypium hirsutum HOM05D006155 ORTHO05D007529 1.8e-95 353.2 253 68.4
PGR004G1196 Punica granatum HOM05D006155 ORTHO05D007529 2.3e-95 352.8 245 69.0
Sabra10G0043200 Salix brachista HOM05D006155 ORTHO05D007529 2.3e-95 352.8 243 70.0
C04p62700 Brassica napus HOM05D006155 ORTHO05D007529 4.0e-95 352.1 250 66.0
Eucgr.H02890 Eucalyptus grandis HOM05D006155 ORTHO05D007529 4.0e-95 352.1 233 72.1
BraA03t11126Z Brassica rapa HOM05D006155 ORTHO05D007529 6.8e-95 351.3 244 68.4
Thhalv10017161m.g Eutrema salsugineum HOM05D006155 ORTHO05D007529 6.8e-95 351.3 243 67.1
BcaB06g28663 Brassica carinata HOM05D006155 ORTHO05D007529 1.2e-94 350.5 229 70.7
BcaC02g07846 Brassica carinata HOM05D006155 ORTHO05D007529 1.2e-94 350.5 228 71.1
BcaC02g07849 Brassica carinata HOM05D006155 ORTHO05D007529 1.2e-94 350.5 229 70.7
BolC3t14563H Brassica oleracea HOM05D006155 ORTHO05D007529 1.2e-94 350.5 244 68.0
BcaC01g05849 Brassica carinata HOM05D006155 ORTHO05D007529 1.5e-94 350.1 228 71.5
BraA04t18060Z Brassica rapa HOM05D006155 ORTHO05D007529 1.5e-94 350.1 246 66.7
Carub.0004s1472 Capsella rubella HOM05D006155 ORTHO05D007529 2.0e-94 349.7 228 71.9
Glyma.20G199100 Glycine max HOM05D006155 ORTHO05D007529 2.0e-94 349.7 215 75.8
Manes.15G047200 Manihot esculenta HOM05D006155 ORTHO05D007529 2.0e-94 349.7 256 66.8
Potri.010G063700 Populus trichocarpa HOM05D006155 ORTHO05D007529 2.0e-94 349.7 228 72.4
AL4G28890 Arabidopsis lyrata HOM05D006155 ORTHO05D007529 2.6e-94 349.4 228 70.6
Medtr1g073140 Medicago truncatula HOM05D006155 ORTHO05D007529 2.6e-94 349.4 245 69.0
Phvul.L001872 Phaseolus vulgaris HOM05D006155 ORTHO05D007529 2.6e-94 349.4 214 76.6
Glyma.10G191200 Glycine max HOM05D006155 ORTHO05D007529 4.4e-94 348.6 215 75.3
C03p21810 Brassica napus HOM05D006155 ORTHO05D007529 5.8e-94 348.2 244 67.2
Duzib212G0768 Durio zibethinus HOM05D006155 ORTHO05D007529 7.5e-94 347.8 251 65.7
ECA248G1656 Erigeron canadensis HOM05D006155 ORTHO05D007529 1.7e-93 346.7 206 77.7
TPR.G18563 Trifolium pratense HOM05D006155 ORTHO05D007529 2.9e-93 345.9 245 69.0
vmacro00537 Vaccinium macrocarpon HOM05D006155 ORTHO05D007529 2.9e-93 345.9 342 54.4
Sp4g15560 Schrenkiella parvula HOM05D006155 ORTHO05D007529 3.7e-93 345.5 249 66.7
CARHR127260 Cardamine hirsuta HOM05D006155 ORTHO05D007529 6.4e-93 344.7 249 67.5
ClCG05G003860 Citrullus lanatus HOM05D006155 ORTHO05D007529 4.1e-92 342.0 236 67.8
THA.LOC104816010 Tarenaya hassleriana HOM05D006155 ORTHO05D007529 4.1e-92 342.0 243 67.1
Lj5g0009281 Lotus japonicus HOM05D006155 ORTHO05D007529 5.4e-92 341.7 223 72.6
FAN22G1742 Fragaria x ananassa HOM05D006155 ORTHO05D007529 7.1e-92 341.3 277 63.2
Nn3g19816 Nelumbo nucifera HOM05D006155 ORTHO05D007529 9.2e-92 340.9 222 74.8
VMungo0720G0761 Vigna mungo HOM05D006155 ORTHO05D007529 1.2e-91 340.5 245 68.6
CDE02G2305 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 2.1e-91 339.7 233 69.1
Sed0003799 Sechium edule HOM05D006155 ORTHO05D007529 2.7e-91 339.3 256 64.5
Hund20478 Selenicereus undatus HOM05D006155 ORTHO05D007529 2.7e-91 339.3 203 75.4
Ca_09794_v3 Cicer arietinum L. HOM05D006155 ORTHO05D007529 3.5e-91 339.0 248 66.1
FAN17G0987 Fragaria x ananassa HOM05D006155 ORTHO05D007529 7.8e-91 337.8 261 65.1
MELO3C006364.2 Cucumis melo HOM05D006155 ORTHO05D007529 2.3e-90 336.3 240 67.1
CsaV3_3G011540 Cucumis sativus L. HOM05D006155 ORTHO05D007529 2.3e-90 336.3 254 65.7
Os02g0816100 Oryza sativa ssp. japonica HOM05D006155 ORTHO05D007529 2.8e-88 329.3 219 72.1
Sed0011773 Sechium edule HOM05D006155 ORTHO05D007529 2.0e-86 323.2 228 66.2
unitig_899.g15552 Utricularia gibba HOM05D006155 ORTHO05D007529 6.0e-83 311.6 266 59.4
HPP92_007421 Vanilla planifolia HOM05D006155 ORTHO05D007529 2.4e-79 299.7 197 71.1
MBI07_g08907_MAGBIO Magnolia biondii HOM05D006155 ORTHO05D007529 3.1e-79 299.3 197 73.6
Cpa.g.sc3.348 Carica papaya HOM05D006155 ORTHO05D007529 1.3e-77 293.9 175 78.3
ATR0787G199 Amborella trichopoda HOM05D006155 ORTHO05D007529 1.4e-76 290.4 205 67.8
Sc04g0004680 Simmondsia chinensis HOM05D006155 ORTHO05D007529 4.2e-76 288.9 209 69.4
CDE01G0085 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 1.2e-67 260.8 233 57.5
SMO165G0032 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 1.8e-66 256.9 212 58.5
Pp3c17_6550 Physcomitrium patens HOM05D006155 ORTHO05D007529 1.1e-63 247.7 207 57.0
Pp3c2_6750 Physcomitrium patens HOM05D006155 ORTHO05D007529 1.7e-61 240.4 219 54.3
LjContig00022g0011299 Lotus japonicus HOM05D006155 ORTHO05D007529 5.3e-55 218.8 241 53.1
TAR365G0649 Trochodendron aralioides HOM05D006155 ORTHO05D007529 2.0e-54 216.9 140 73.6
Hma1.2p1_0042F.1_g025660 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 6.3e-48 195.3 95 100.0
Hma1.2p1_0144F.1_g065125 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 6.3e-48 195.3 95 100.0
CiPaw.01G175800 Carya illinoinensis HOM05D006155 ORTHO05D007529 1.2e-46 191.0 101 85.1
MCO11G090 Micromonas commoda HOM05D006155 ORTHO05D007529 1.6e-43 180.6 213 46.9
Psat6g138760 Pisum sativum HOM05D006155 ORTHO05D007529 3.9e-42 176.0 122 67.2
QL06p021877 Quercus lobata HOM05D006155 ORTHO05D007529 5.3e-39 165.6 108 71.3
Cre03.g193000 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 6.9e-39 165.2 210 43.3
SGA_v2.0_scaffold31G12610 Striga asiatica HOM05D006155 ORTHO05D007529 1.9e-36 157.1 198 48.0
Rhsim09G0043000 Rhododendron simsii HOM05D006155 ORTHO05D007529 7.2e-36 155.2 116 69.0
AUR62035887 Chenopodium quinoa HOM05D006155 ORTHO05D007529 1.5e-33 147.5 116 62.1
SMO115G0208 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 2.0e-33 147.1 210 41.0
Zm00001eb191500 Zea mays HOM05D006155 ORTHO05D007529 9.7e-33 144.8 132 59.8
Lj5g0004239 Lotus japonicus HOM05D006155 ORTHO05D007529 8.5e-29 131.7 154 48.7
Lj5g0006737 Lotus japonicus HOM05D006155 ORTHO05D007529 8.5e-29 131.7 154 48.7
Rhsim09G0041400 Rhododendron simsii HOM05D000030 ORTHO05D000009 8.8e-26 121.7 79 73.4
SEGI_12787 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 1.5e-25 120.9 94 64.9
SEGI_32209 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 5.3e-23 112.5 80 70.0
Actinidia37388 Actinidia chinensis HOM05D006155 ORTHO05D007529 1.2e-22 111.3 62 80.6
Rhsim09G0048000 Rhododendron simsii HOM05D000029 ORTHO05D002162 1.9e-20 104.0 83 63.9
SGA_v2.0_scaffold31G12618 Striga asiatica HOM05D006155 ORTHO05D007529 4.4e-17 92.8 190 35.3
Cre01.g025100 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 3.7e-16 89.7 211 32.2
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 1.1e-15 88.2 180 33.9
AUR62035886 Chenopodium quinoa HOM05D006155 ORTHO05D007529 1.2e-14 84.7 54 72.2
SalBow7G2104 Salvia bowleyana HOM05D000708 ORTHO05D001418 8.5e-13 78.6 48 72.9
C09p23060 Brassica napus HOM05D006155 ORTHO05D007529 2.7e-11 73.6 71 64.8


User provided reference genes

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