Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0041F.1_g025280 Hydrangea macrophylla HOM05D006102 ORTHO05D007550 3.2e-18 94.0 45 100.0
Dinv43669 Davidia involucrata HOM05D006102 ORTHO05D007550 5.3e-13 76.6 44 81.8
CSS0002341 Camellia sinensis var. sinensis HOM05D006102 ORTHO05D007550 6.5e-11 69.7 42 78.6
Cc02_g24460 Coffea canephora HOM05D006102 ORTHO05D007550 9.3e-10 65.9 44 70.5
RcHm_v2.0_Chr1g0349071 Rosa chinensis HOM05D006102 ORTHO05D007550 9.3e-10 65.9 41 70.7
GSVIVG01018154001 Vitis vinifera HOM05D006102 ORTHO05D007550 2.1e-09 64.7 42 71.4
Nn1g00999 Nelumbo nucifera HOM05D006102 ORTHO05D007550 7.9e-09 62.8 41 70.7
Potri.014G066000 Populus trichocarpa HOM05D006102 ORTHO05D007550 1.0e-08 62.4 45 62.2
QL04p037175 Quercus lobata HOM05D006102 ORTHO05D007550 1.0e-08 62.4 42 64.3
TAR375G0254 Trochodendron aralioides HOM05D006102 ORTHO05D007550 1.0e-08 62.4 38 73.7
Manes.05G049400 Manihot esculenta HOM05D006102 ORTHO05D007550 1.3e-08 62.0 45 60.0
Sabra14G0046000 Salix brachista HOM05D006102 ORTHO05D007550 1.3e-08 62.0 45 60.0
FvH4_7g11041 Fragaria vesca HOM05D006102 ORTHO05D007550 2.3e-08 61.2 41 63.4
FAN03G1880 Fragaria x ananassa HOM05D006102 ORTHO05D007550 2.3e-08 61.2 41 63.4
FAN06G2296 Fragaria x ananassa HOM05D006102 ORTHO05D007550 3.0e-08 60.8 40 65.0
PSO017G2680 Papaver somniferum HOM05D006102 ORTHO05D007550 3.9e-08 60.5 42 66.7
PSO170G5751 Papaver somniferum HOM05D006102 ORTHO05D007550 3.9e-08 60.5 42 66.7
Ciclev10018476m.g Citrus clementina HOM05D006102 ORTHO05D007550 5.1e-08 60.1 41 68.3
FAN10G3898 Fragaria x ananassa HOM05D006102 ORTHO05D007550 5.1e-08 60.1 41 61.0
CiPaw.14G025500 Carya illinoinensis HOM05D006102 ORTHO05D007550 8.7e-08 59.3 42 61.9
SGA_v2.0_scaffold11G05526 Striga asiatica HOM05D006102 ORTHO05D007550 1.5e-07 58.5 44 59.1
vmacro13446 Vaccinium macrocarpon HOM05D006102 ORTHO05D007550 2.5e-07 57.8 42 69.0
Migut.N01612 Erythranthe guttata HOM05D006102 ORTHO05D007550 3.3e-07 57.4 42 66.7
Nitab4.5_0000859g0180 Nicotiana tabacum HOM05D006102 ORTHO05D007550 3.3e-07 57.4 41 65.9
Nitab4.5_0011151g0030 Nicotiana tabacum HOM05D006102 ORTHO05D007550 3.3e-07 57.4 41 65.9
Solyc01g090860.3 Solanum lycopersicum HOM05D006102 ORTHO05D007550 3.3e-07 57.4 41 63.4
MSTRG.28175 Avicennia marina HOM05D006102 ORTHO05D007550 4.3e-07 57.0 44 59.1
Gohir.D11G083100 Gossypium hirsutum HOM05D006102 ORTHO05D007550 4.3e-07 57.0 41 63.4
Aqoxy7G00755 Aquilegia oxysepala HOM05D006102 ORTHO05D007550 5.7e-07 56.6 39 64.1
FAN06G2175 Fragaria x ananassa HOM05D006102 ORTHO05D007550 5.7e-07 56.6 37 62.2
Actinidia12183 Actinidia chinensis HOM05D006102 ORTHO05D007550 7.4e-07 56.2 41 68.3
Gohir.A11G078500 Gossypium hirsutum HOM05D006102 ORTHO05D007550 9.7e-07 55.8 41 61.0
Phvul.010G071766 Phaseolus vulgaris HOM05D006102 ORTHO05D007550 9.7e-07 55.8 39 64.1
CAN.G1872.3 Capsicum annuum HOM05D006102 ORTHO05D007550 1.3e-06 55.5 41 61.0
FAN10G3138 Fragaria x ananassa HOM05D006102 ORTHO05D007550 1.3e-06 55.5 37 59.5
Sopen01g036600 Solanum pennellii HOM05D006102 ORTHO05D007550 1.3e-06 55.5 41 61.0
Cfa011148 Carpinus fangiana HOM05D006102 ORTHO05D007550 1.6e-06 55.1 41 61.0
Gorai.007G088700 Gossypium raimondii HOM05D006102 ORTHO05D007550 1.6e-06 55.1 41 61.0
Lj7P537G26 Lonicera japonica HOM05D006102 ORTHO05D007550 1.6e-06 55.1 41 65.9
MD07G1115100 Malus domestica HOM05D006102 ORTHO05D007550 1.6e-06 55.1 43 62.8
Carub.0006s3716 Capsella rubella HOM05D006102 ORTHO05D007550 2.2e-06 54.7 39 64.1
Actinidia27577 Actinidia chinensis HOM05D006102 ORTHO05D007550 2.8e-06 54.3 41 68.3
THA.LOC104801481 Tarenaya hassleriana HOM05D006102 ORTHO05D007550 2.8e-06 54.3 42 57.1
Glyma.03G032900 Glycine max HOM05D006102 ORTHO05D007550 6.3e-06 53.1 41 58.5
Sp6g00130 Schrenkiella parvula HOM05D006102 ORTHO05D007550 6.3e-06 53.1 39 61.5
BcaC01g04890 Brassica carinata HOM05D006102 ORTHO05D007550 8.2e-06 52.8 39 61.5
C03p32590 Brassica napus HOM05D006102 ORTHO05D007550 8.2e-06 52.8 39 61.5
BolC3t15598H Brassica oleracea HOM05D006102 ORTHO05D007550 8.2e-06 52.8 39 61.5


User provided reference genes

Program Settings