Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0036F.1_g023730 Hydrangea macrophylla HOM05D006994 ORTHO05D008229 0.0e+00 1730.7 874 100.0
Dinv12707 Davidia involucrata HOM05D006994 ORTHO05D008229 1.3e-251 873.6 967 53.3
Dinv06483 Davidia involucrata HOM05D006994 ORTHO05D008229 1.4e-250 870.2 950 53.5
CSS0008190 Camellia sinensis var. sinensis HOM05D006994 ORTHO05D008229 2.6e-188 663.3 950 45.4
Actinidia32524 Actinidia chinensis HOM05D006994 ORTHO05D008229 3.5e-161 573.2 943 41.1
TAR627G0262 Trochodendron aralioides HOM05D006994 ORTHO05D008229 3.9e-152 543.1 976 39.3
TAR629G2429 Trochodendron aralioides HOM05D006994 ORTHO05D008229 9.6e-143 511.9 973 38.6
QL08p043727 Quercus lobata HOM05D006994 ORTHO05D008229 3.8e-139 500.0 977 37.3
GSVIVG01000809001 Vitis vinifera HOM05D006994 ORTHO05D008229 2.5e-135 487.3 942 37.8
Cfa022555 Carpinus fangiana HOM05D006994 ORTHO05D008229 7.3e-135 485.7 973 36.4
Rhsim06G0121200 Rhododendron simsii HOM05D006994 ORTHO05D008229 2.8e-126 457.2 931 36.3
Prupe.3G170300 Prunus persica HOM05D006994 ORTHO05D008229 5.3e-125 453.0 983 34.9
Thecc.01G159900 Theobroma cacao HOM05D006994 ORTHO05D008229 1.2e-124 451.8 971 36.9
vmacro23412 Vaccinium macrocarpon HOM05D006994 ORTHO05D008229 2.9e-115 420.6 917 35.0
Duzib147G0646 Durio zibethinus HOM05D006994 ORTHO05D008229 7.4e-111 406.0 957 34.5
Atru.chr6.1474 Acer truncatum HOM05D006994 ORTHO05D008229 1.1e-109 402.1 975 33.7
COL.COLO4_33721 Corchorus olitorius HOM05D006994 ORTHO05D008229 9.0e-109 399.1 980 33.7
Duzib187G0002 Durio zibethinus HOM05D006994 ORTHO05D008229 8.5e-107 392.5 973 35.0
Actinidia11193 Actinidia chinensis HOM05D006994 ORTHO05D008229 1.6e-105 388.3 872 35.2
Nn3g20985 Nelumbo nucifera HOM05D006994 ORTHO05D008229 1.8e-104 384.8 982 31.8
RcHm_v2.0_Chr2g0150941 Rosa chinensis HOM05D006994 ORTHO05D008229 1.3e-102 378.6 962 31.8
FAN02G4438 Fragaria x ananassa HOM05D006994 ORTHO05D008229 3.1e-101 374.0 954 32.7
CiPaw.03G188200 Carya illinoinensis HOM05D006994 ORTHO05D008229 1.2e-100 372.1 860 34.3
Nn6g34417 Nelumbo nucifera HOM05D006994 ORTHO05D008229 2.3e-96 357.8 974 31.5
FAN09G0855 Fragaria x ananassa HOM05D006994 ORTHO05D008229 8.8e-96 355.9 954 32.2
Lj1A585G38 Lonicera japonica HOM05D006994 ORTHO05D008229 1.1e-95 355.5 924 33.9
FAN14G2472 Fragaria x ananassa HOM05D006994 ORTHO05D008229 3.3e-95 354.0 958 32.3
FvH4_6g37820 Fragaria vesca HOM05D006994 ORTHO05D008229 1.3e-94 352.1 962 32.2
Gohir.D09G005900 Gossypium hirsutum HOM05D006994 ORTHO05D008229 6.3e-94 349.7 966 33.2
MD09G1155600 Malus domestica HOM05D006994 ORTHO05D008229 5.9e-92 343.2 982 31.3
Cpa.g.sc50.71 Carica papaya HOM05D006994 ORTHO05D008229 1.3e-91 342.0 970 32.8
Gorai.006G007500 Gossypium raimondii HOM05D006994 ORTHO05D008229 1.3e-91 342.0 968 32.7
Ciclev10030533m.g Citrus clementina HOM05D006994 ORTHO05D008229 1.4e-88 332.0 994 31.0
CANSAT64G1952 Cannabis sativa HOM05D006994 ORTHO05D008229 1.5e-87 328.6 966 32.1
TWI59G0403 Tripterygium wilfordii HOM05D006994 ORTHO05D008229 9.1e-77 292.7 980 29.2
Cc05_g09220 Coffea canephora HOM05D006994 ORTHO05D008229 3.2e-74 284.3 964 28.6
Gohir.A09G006700 Gossypium hirsutum HOM05D006994 ORTHO05D008229 1.3e-70 272.3 833 32.1
Eucgr.A01960 Eucalyptus grandis HOM05D006994 ORTHO05D008229 3.5e-68 264.2 1002 28.9
Oeu041607.1 Olea europaea HOM05D006994 ORTHO05D008229 6.1e-65 253.4 785 29.3
Nitab4.5_0007153g0010 Nicotiana tabacum HOM05D006994 ORTHO05D008229 4.4e-63 247.3 862 28.9
DCAR_021306 Daucus carota HOM05D006994 ORTHO05D008229 5.9e-60 236.9 1093 27.0
Peaxi162Scf00154g00620 Petunia axillaris HOM05D006994 ORTHO05D008229 2.5e-58 231.5 834 27.9
Nitab4.5_0001121g0180 Nicotiana tabacum HOM05D006994 ORTHO05D008229 9.5e-58 229.6 952 27.4
Manes.02G085800 Manihot esculenta HOM05D006994 ORTHO05D008229 2.1e-57 228.4 760 29.6
PGSC0003DMG400017294 Solanum tuberosum HOM05D006994 ORTHO05D008229 3.1e-56 224.6 881 27.1
Sopen07g029270 Solanum pennellii HOM05D006994 ORTHO05D008229 4.0e-56 224.2 875 27.0
PGR042G2686 Punica granatum HOM05D006994 ORTHO05D008229 8.9e-56 223.0 950 27.9
Aqoxy4G00195 Aquilegia oxysepala HOM05D006994 ORTHO05D008229 1.2e-55 222.6 959 28.7
Glyma.08G310800 Glycine max HOM05D006994 ORTHO05D008229 1.9e-53 215.3 944 27.8
PSO541G2047 Papaver somniferum HOM05D006994 ORTHO05D008229 2.7e-52 211.5 991 25.8
ClCG09G022300 Citrullus lanatus HOM05D006994 ORTHO05D008229 1.0e-51 209.5 964 26.7
Glyma.02G288000 Glycine max HOM05D006994 ORTHO05D008229 2.3e-51 208.4 939 27.6
Phvul.008G190400 Phaseolus vulgaris HOM05D006994 ORTHO05D008229 1.1e-50 206.1 933 27.2
PSO675G3324 Papaver somniferum HOM05D006994 ORTHO05D008229 1.5e-50 205.7 982 26.0
Glyma.14G026900 Glycine max HOM05D006994 ORTHO05D008229 7.3e-50 203.4 937 27.1
VMungo0647G0009 Vigna mungo HOM05D006994 ORTHO05D008229 7.3e-50 203.4 941 27.4
MSTRG.15058 Avicennia marina HOM05D006994 ORTHO05D008229 1.5e-47 195.7 931 27.4
Lalb_Chr04g0248671 Lupinus albus HOM05D006994 ORTHO05D008229 3.4e-47 194.5 833 26.7
Ca_06289_v3 Cicer arietinum L. HOM05D006994 ORTHO05D008229 7.5e-47 193.4 926 26.9
MELO3C014460.2 Cucumis melo HOM05D006994 ORTHO05D008229 7.5e-47 193.4 966 26.4
SalBow7G4498 Salvia bowleyana HOM05D006994 ORTHO05D008229 1.7e-46 192.2 897 26.6
Sed0021960 Sechium edule HOM05D006994 ORTHO05D008229 3.7e-46 191.0 969 25.8
CsaV3_6G037970 Cucumis sativus L. HOM05D006994 ORTHO05D008229 1.9e-45 188.7 968 26.0
CAN.G585.58 Capsicum annuum HOM05D006994 ORTHO05D008229 1.6e-44 185.7 851 25.7
arahy.Tifrunner.gnm1.ann1.T2GFFQ Arachis hypogaea HOM05D006994 ORTHO05D008229 6.0e-44 183.7 929 25.3
CAN.G1332.1 Capsicum annuum HOM05D006994 ORTHO05D008229 3.0e-43 181.4 874 26.2
Sed0007753 Sechium edule HOM05D006994 ORTHO05D008229 5.1e-43 180.6 940 26.0
arahy.Tifrunner.gnm1.ann1.0D28PY Arachis hypogaea HOM05D006994 ORTHO05D008229 6.6e-43 180.3 931 25.1
CAN.G1481.2 Capsicum annuum HOM05D006994 ORTHO05D008229 1.9e-42 178.7 915 25.1
TPR.G12670 Trifolium pratense HOM05D006994 ORTHO05D008229 3.3e-42 177.9 938 26.7
Solyc07g055910.4 Solanum lycopersicum HOM05D006994 ORTHO05D008229 9.5e-42 176.4 741 26.7
Glyma.18G104900 Glycine max HOM05D006994 ORTHO05D008229 5.2e-40 170.6 824 26.9
VMungo0540G1807 Vigna mungo HOM05D006994 ORTHO05D008229 3.4e-39 167.9 958 26.0
Psat0s1339g0080 Pisum sativum HOM05D006994 ORTHO05D008229 7.5e-39 166.8 909 24.8
LjContig00310g0024424 Lotus japonicus HOM05D006994 ORTHO05D008229 1.1e-37 162.9 928 25.2
MD17G1141700 Malus domestica HOM05D006994 ORTHO05D008229 1.1e-37 162.9 520 30.6
Lalb_Chr17g0348341 Lupinus albus HOM05D006994 ORTHO05D008229 1.4e-37 162.5 762 24.4
Medtr5g091810 Medicago truncatula HOM05D006994 ORTHO05D008229 3.2e-37 161.4 789 25.9
Sopen06g004440 Solanum pennellii HOM05D006994 ORTHO05D008229 4.4e-31 141.0 804 26.1
ATR0602G060 Amborella trichopoda HOM05D006994 ORTHO05D008229 3.8e-30 137.9 950 23.5
CDE02G3923 Ceratophyllum demersum HOM05D006994 ORTHO05D008229 3.2e-29 134.8 958 24.3
Phvul.006G035100 Phaseolus vulgaris HOM05D006994 ORTHO05D008229 3.0e-27 128.3 712 26.8
MSTRG.6762 Avicennia marina HOM05D006994 ORTHO05D008229 3.6e-25 121.3 503 29.8
arahy.Tifrunner.gnm1.ann1.0VWG63 Arachis hypogaea HOM05D006994 ORTHO05D008229 9.0e-24 116.7 935 24.1
CDE08G1216 Ceratophyllum demersum HOM05D006994 ORTHO05D008229 4.6e-20 104.4 594 24.4
arahy.Tifrunner.gnm1.ann1.EW4W42 Arachis hypogaea HOM05D006994 ORTHO05D008229 3.9e-19 101.3 962 24.0
Psat5g180160 Pisum sativum HOM05D006994 ORTHO05D008229 2.9e-14 85.1 328 26.2
Gohir.A09G006800 Gossypium hirsutum HOM05D006994 ORTHO05D008229 2.3e-11 75.5 60 61.7
Migut.H02109 Erythranthe guttata HOM05D006994 ORTHO05D008229 6.7e-11 73.9 183 33.3
Solyc06g009803.1 Solanum lycopersicum HOM05D006994 ORTHO05D008229 1.3e-09 69.7 112 37.5
FAN05G3500 Fragaria x ananassa HOM05D006994 ORTHO05D008229 2.1e-09 68.9 153 35.3
HPP92_005185 Vanilla planifolia HOM05D006994 ORTHO05D008229 1.4e-08 66.2 263 25.1
Glyma.18G105000 Glycine max HOM05D006994 ORTHO05D008229 1.2e-07 63.2 78 48.7
Phvul.006G035050 Phaseolus vulgaris HOM05D006994 ORTHO05D008229 1.3e-06 59.7 59 52.5


User provided reference genes

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