Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0036F.1_g023530 Hydrangea macrophylla HOM05D007013 ORTHO05D008999 3.0e-193 678.3 338 100.0
Hma1.2p1_0036F.1_g023520 Hydrangea macrophylla HOM05D007013 ORTHO05D008999 1.6e-183 646.0 322 100.0
CSS0027260 Camellia sinensis var. sinensis HOM05D007013 ORTHO05D008999 5.0e-132 474.9 323 74.3
Actinidia05088 Actinidia chinensis HOM05D007013 ORTHO05D008999 1.5e-131 473.4 322 74.8
vmacro02226 Vaccinium macrocarpon HOM05D007013 ORTHO05D008999 8.0e-130 467.6 322 73.3
GSVIVG01037670001 Vitis vinifera HOM05D007013 ORTHO05D008999 1.3e-124 450.3 321 72.3
TAR624G0955 Trochodendron aralioides HOM05D007013 ORTHO05D008999 1.2e-122 443.7 320 70.6
Oeu034036.2 Olea europaea HOM05D007013 ORTHO05D008999 2.0e-120 436.4 322 66.1
Cc05_g13940 Coffea canephora HOM05D007013 ORTHO05D008999 1.8e-118 429.9 320 67.8
Aqoxy1G02096 Aquilegia oxysepala HOM05D007013 ORTHO05D008999 1.1e-115 420.6 320 65.6
Atru.chr2.3453 Acer truncatum HOM05D007013 ORTHO05D008999 1.2e-114 417.2 322 66.1
CAN.G337.80 Capsicum annuum HOM05D007013 ORTHO05D008999 8.0e-114 414.5 322 65.2
Manes.15G070387 Manihot esculenta HOM05D007013 ORTHO05D008999 1.0e-113 414.1 322 65.5
PSO675G8214 Papaver somniferum HOM05D007013 ORTHO05D008999 2.3e-113 412.9 323 64.4
Duzib213G0396 Durio zibethinus HOM05D007013 ORTHO05D008999 3.4e-112 409.1 326 65.0
PSO541G1885 Papaver somniferum HOM05D007013 ORTHO05D008999 3.4e-112 409.1 321 64.2
TWI38G0247 Tripterygium wilfordii HOM05D007013 ORTHO05D008999 5.8e-112 408.3 322 63.7
CiPaw.12G131100 Carya illinoinensis HOM05D007013 ORTHO05D008999 2.2e-111 406.4 320 66.9
Cfa020325 Carpinus fangiana HOM05D007013 ORTHO05D008999 6.4e-111 404.8 320 66.9
Nitab4.5_0005590g0010 Nicotiana tabacum HOM05D007013 ORTHO05D008999 8.3e-111 404.4 324 63.9
Nitab4.5_0002287g0070 Nicotiana tabacum HOM05D007013 ORTHO05D008999 1.1e-110 404.1 324 63.9
Ciclev10008561m.g Citrus clementina HOM05D007013 ORTHO05D008999 3.2e-110 402.5 320 65.3
Sopen07g032910 Solanum pennellii HOM05D007013 ORTHO05D008999 7.0e-110 401.4 322 62.7
Thecc.07G033700 Theobroma cacao HOM05D007013 ORTHO05D008999 7.0e-110 401.4 326 63.5
QL08p009594 Quercus lobata HOM05D007013 ORTHO05D008999 4.6e-109 398.7 321 66.0
Peaxi162Scf00235g00319 Petunia axillaris HOM05D007013 ORTHO05D008999 6.0e-109 398.3 339 61.7
EL10Ac4g07781 Beta vulgaris HOM05D007013 ORTHO05D008999 3.9e-108 395.6 320 61.9
Nn1g07163 Nelumbo nucifera HOM05D007013 ORTHO05D008999 6.6e-108 394.8 321 63.9
Dinv22254 Davidia involucrata HOM05D007013 ORTHO05D008999 8.6e-108 394.4 239 80.8
Lj6g0002864 Lotus japonicus HOM05D007013 ORTHO05D008999 3.3e-107 392.5 319 61.8
Potri.001G418800 Populus trichocarpa HOM05D007013 ORTHO05D008999 3.3e-107 392.5 320 62.8
TPR.G33766 Trifolium pratense HOM05D007013 ORTHO05D008999 5.6e-107 391.7 319 61.1
FvH4_3g19730 Fragaria vesca HOM05D007013 ORTHO05D008999 9.5e-107 391.0 319 63.9
MD11G1215400 Malus domestica HOM05D007013 ORTHO05D008999 9.5e-107 391.0 321 62.9
Medtr3g052590 Medicago truncatula HOM05D007013 ORTHO05D008999 9.5e-107 391.0 320 59.7
Solyc07g064710.3 Solanum lycopersicum HOM05D007013 ORTHO05D008999 4.7e-106 388.7 322 61.2
Glyma.08G318300 Glycine max HOM05D007013 ORTHO05D008999 6.8e-105 384.8 319 59.9
RcHm_v2.0_Chr5g0033071 Rosa chinensis HOM05D007013 ORTHO05D008999 8.9e-105 384.4 319 63.3
Eucgr.F03478 Eucalyptus grandis HOM05D007013 ORTHO05D008999 2.0e-104 383.3 330 61.8
Gorai.002G090100 Gossypium raimondii HOM05D007013 ORTHO05D008999 2.6e-104 382.9 326 60.7
Hund01977 Selenicereus undatus HOM05D007013 ORTHO05D008999 3.4e-104 382.5 320 60.9
Gohir.D01G068100 Gossypium hirsutum HOM05D007013 ORTHO05D008999 1.7e-103 380.2 326 60.4
CANSAT11G0669 Cannabis sativa HOM05D007013 ORTHO05D008999 4.9e-103 378.6 321 61.7
MSTRG.14440 Avicennia marina HOM05D007013 ORTHO05D008999 6.4e-103 378.3 322 58.1
Lalb_Chr18g0049881 Lupinus albus HOM05D007013 ORTHO05D008999 1.4e-102 377.1 319 61.1
DCAR_012723 Daucus carota HOM05D007013 ORTHO05D008999 3.2e-102 375.9 325 60.3
COL.COLO4_09677 Corchorus olitorius HOM05D007013 ORTHO05D008999 4.1e-102 375.6 320 61.2
HanXRQChr03g0076401 Helianthus annuus HOM05D007013 ORTHO05D008999 7.1e-102 374.8 322 60.6
Psat5g177160 Pisum sativum HOM05D007013 ORTHO05D008999 3.5e-101 372.5 319 57.7
unitig_578.g16279 Utricularia gibba HOM05D001434 ORTHO05D008999 1.0e-100 370.9 322 59.9
VMungo0540G0725 Vigna mungo HOM05D007013 ORTHO05D008999 1.3e-100 370.5 319 59.2
THA.LOC104825406 Tarenaya hassleriana HOM05D007013 ORTHO05D008999 3.3e-99 365.9 323 59.8
Aa31LG8G7290 Aethionema arabicum HOM05D007013 ORTHO05D008999 4.3e-99 365.5 321 60.4
ClCG09G010880 Citrullus lanatus HOM05D007013 ORTHO05D008999 5.6e-99 365.2 320 60.0
ECA240G2937 Erigeron canadensis HOM05D007013 ORTHO05D008999 5.6e-99 365.2 322 59.3
Haze_09698 Corylus avellana HOM05D007013 ORTHO05D008999 9.5e-99 364.4 257 70.8
CsaV3_7G021910 Cucumis sativus L. HOM05D007013 ORTHO05D008999 1.6e-98 363.6 320 60.9
arahy.Tifrunner.gnm1.ann1.YL2AFE Arachis hypogaea HOM05D007013 ORTHO05D008999 2.1e-98 363.2 329 55.9
Sc16g0005930 Simmondsia chinensis HOM05D007013 ORTHO05D008999 2.1e-98 363.2 322 58.1
Migut.H01815 Erythranthe guttata HOM05D007013 ORTHO05D008999 2.8e-98 362.8 322 58.1
Thhalv10020871m.g Eutrema salsugineum HOM05D007013 ORTHO05D008999 2.8e-98 362.8 323 60.7
Sed0023076 Sechium edule HOM05D007013 ORTHO05D008999 3.6e-98 362.5 320 59.1
Ah.06g182900 Amaranthus hybridus HOM05D007013 ORTHO05D008999 4.7e-98 362.1 320 55.9
AL3G34260 Arabidopsis lyrata HOM05D007013 ORTHO05D008999 4.7e-98 362.1 324 59.3
A02p28310 Brassica napus HOM05D007013 ORTHO05D008999 1.4e-97 360.5 323 58.8
HPP92_012407 Vanilla planifolia HOM05D007013 ORTHO05D008999 2.3e-97 359.8 330 56.7
Sp2g09120 Schrenkiella parvula HOM05D007013 ORTHO05D008999 4.0e-97 359.0 324 59.3
BraA02t07867Z Brassica rapa HOM05D007013 ORTHO05D008999 6.8e-97 358.2 323 58.8
BcaC03g16648 Brassica carinata HOM05D007013 ORTHO05D008999 1.2e-96 357.5 323 58.5
BolC2t10525H Brassica oleracea HOM05D007013 ORTHO05D008999 1.2e-96 357.5 323 58.5
MELO3C013155.2 Cucumis melo HOM05D007013 ORTHO05D008999 1.5e-96 357.1 320 59.4
Carub.0003s2044 Capsella rubella HOM05D007013 ORTHO05D008999 2.0e-96 356.7 322 59.0
ATR0794G085 Amborella trichopoda HOM05D007013 ORTHO05D008999 3.4e-96 355.9 321 59.2
C02p44890 Brassica napus HOM05D007013 ORTHO05D008999 7.6e-96 354.8 323 58.5
AUR62020414 Chenopodium quinoa HOM05D007013 ORTHO05D008999 9.9e-96 354.4 282 61.0
Lsat_1_v5_gn_9_93121 Lactuca sativa HOM05D007013 ORTHO05D008999 6.4e-95 351.7 323 58.2
Cpa.g.sc12.289 Carica papaya HOM05D007013 ORTHO05D008999 1.2e-93 347.4 313 59.4
BcaB07g30535 Brassica carinata HOM05D007013 ORTHO05D008999 2.1e-93 346.7 319 58.6
Phvul.006G045700 Phaseolus vulgaris HOM05D007013 ORTHO05D008999 3.5e-93 345.9 302 58.6
FAN16G1225 Fragaria x ananassa HOM05D007013 ORTHO05D008999 4.6e-93 345.5 322 59.3
Sabra16G0284300 Salix brachista HOM05D007013 ORTHO05D008999 5.1e-92 342.0 317 57.7
SGA_v2.0_scaffold363G49936 Striga asiatica HOM05D007013 ORTHO05D008999 5.1e-92 342.0 350 52.6
Ca_14746_v3 Cicer arietinum L. HOM05D007013 ORTHO05D008999 1.6e-90 337.0 260 60.4
Rhsim06G0218600 Rhododendron simsii HOM05D007013 ORTHO05D008999 2.8e-90 336.3 268 64.2
Gohir.A01G080900 Gossypium hirsutum HOM05D007013 ORTHO05D008999 5.8e-80 302.0 249 60.6
FAN11G2199 Fragaria x ananassa HOM05D007013 ORTHO05D008999 3.8e-79 299.3 319 53.0
Prupe.4G215900 Prunus persica HOM05D007013 ORTHO05D008999 1.9e-78 297.0 321 53.0
arahy.Tifrunner.gnm1.ann1.PYQ1JD Arachis hypogaea HOM05D007013 ORTHO05D008999 5.4e-78 295.4 239 58.6
Lj1A874G27 Lonicera japonica HOM05D007013 ORTHO05D008999 1.6e-77 293.9 198 72.7
AT3G20480 Arabidopsis thaliana HOM05D007013 ORTHO05D008999 2.4e-70 270.0 239 59.0
PGSC0003DMG400022313 Solanum tuberosum HOM05D007013 ORTHO05D008999 1.3e-66 257.7 208 58.7
AUR62015801 Chenopodium quinoa HOM05D007013 ORTHO05D008999 1.6e-66 257.3 215 58.1
Mapoly0002s0307 Marchantia polymorpha HOM05D007013 ORTHO05D008999 5.8e-64 248.8 338 43.2
SMO367G1261 Selaginella moellendorffii HOM05D007013 ORTHO05D008999 2.5e-62 243.4 326 43.3
SEGI_14581 Sequoiadendron giganteum HOM05D007013 ORTHO05D008999 4.1e-57 226.1 242 52.5
Zm00001eb030850 Zea mays HOM05D007013 ORTHO05D008999 5.3e-57 225.7 236 54.7
Glyma.18G095300 Glycine max HOM05D007013 ORTHO05D008999 3.4e-56 223.0 230 49.6
Os07g0102000 Oryza sativa ssp. japonica HOM05D007013 ORTHO05D008999 5.0e-47 192.6 202 47.5
Pp3c19_1630 Physcomitrium patens HOM05D007013 ORTHO05D008999 2.9e-39 166.8 325 35.7
CBR_g39764 Chara braunii HOM05D007013 ORTHO05D008999 8.0e-37 158.7 346 31.5
CARHR096240 Cardamine hirsuta HOM05D007013 ORTHO05D008999 1.8e-36 157.5 140 54.3
AagrBONN_evm.TU.Sc2ySwM_228.2947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 9.1e-33 145.2 231 39.8
CDE05G3055 Ceratophyllum demersum HOM05D007013 ORTHO05D008999 2.2e-31 140.6 129 55.0
FAN16G0901 Fragaria x ananassa HOM05D007013 ORTHO05D008999 1.8e-28 131.0 104 70.2
Glyma.18G095150 Glycine max HOM05D007013 ORTHO05D008999 1.7e-26 124.4 189 37.6
TWI34G0353 Tripterygium wilfordii HOM05D007013 ORTHO05D008999 9.1e-25 118.6 135 46.7
Medtr0152s0030 Medicago truncatula HOM05D007013 ORTHO05D008999 6.1e-13 79.3 101 39.6
Medtr0152s0050 Medicago truncatula HOM05D007013 ORTHO05D008999 9.2e-09 65.5 70 41.4


User provided reference genes

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