Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0033F.1_g020630 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 3.5e-177 624.8 298 100.0
Dinv32422 Davidia involucrata HOM05D006418 ORTHO05D008063 1.0e-160 570.1 294 90.1
vmacro13338 Vaccinium macrocarpon HOM05D006418 ORTHO05D008063 2.5e-159 565.5 297 88.6
Actinidia38288 Actinidia chinensis HOM05D006418 ORTHO05D008063 9.4e-159 563.5 297 88.6
CSS0035566 Camellia sinensis var. sinensis HOM05D006418 ORTHO05D008063 3.0e-157 558.5 297 86.2
TAR375G0873 Trochodendron aralioides HOM05D006418 ORTHO05D008063 4.0e-157 558.1 297 86.5
MD07G1128500 Malus domestica HOM05D006418 ORTHO05D008063 6.8e-157 557.4 298 84.9
Rhsim07G0021100 Rhododendron simsii HOM05D006418 ORTHO05D008063 3.4e-156 555.1 297 86.5
GSVIVG01027527001 Vitis vinifera HOM05D006418 ORTHO05D008063 9.8e-156 553.5 294 86.7
Nn1g01350 Nelumbo nucifera HOM05D006418 ORTHO05D008063 1.3e-155 553.1 297 85.9
Aqoxy5G03975 Aquilegia oxysepala HOM05D006418 ORTHO05D008063 1.7e-155 552.7 296 84.5
CANSAT56G2190 Cannabis sativa HOM05D006418 ORTHO05D008063 1.7e-155 552.7 295 85.4
Lj3g0006580 Lotus japonicus HOM05D006418 ORTHO05D008063 3.7e-155 551.6 295 86.8
TWI59G1449 Tripterygium wilfordii HOM05D006418 ORTHO05D008063 3.7e-155 551.6 296 85.8
Cfa004182 Carpinus fangiana HOM05D006418 ORTHO05D008063 6.3e-155 550.8 294 86.4
Lj7A519G38 Lonicera japonica HOM05D006418 ORTHO05D008063 6.3e-155 550.8 297 85.9
arahy.Tifrunner.gnm1.ann1.K1NG1D Arachis hypogaea HOM05D006418 ORTHO05D008063 1.1e-154 550.1 295 85.8
Potri.002G153100 Populus trichocarpa HOM05D006418 ORTHO05D008063 1.1e-154 550.1 294 86.7
FvH4_7g13130 Fragaria vesca HOM05D006418 ORTHO05D008063 9.1e-154 547.0 297 83.8
FAN06G0540 Fragaria x ananassa HOM05D006418 ORTHO05D008063 9.1e-154 547.0 297 83.8
FAN06G3976 Fragaria x ananassa HOM05D006418 ORTHO05D008063 9.1e-154 547.0 297 83.8
Nitab4.5_0010430g0060 Nicotiana tabacum HOM05D006418 ORTHO05D008063 9.1e-154 547.0 295 85.4
Duzib138G1515 Durio zibethinus HOM05D006418 ORTHO05D008063 1.6e-153 546.2 295 84.7
FAN10G2923 Fragaria x ananassa HOM05D006418 ORTHO05D008063 2.0e-153 545.8 297 83.8
TPR.G17586 Trifolium pratense HOM05D006418 ORTHO05D008063 2.7e-153 545.4 297 84.2
Peaxi162Scf00021g00525 Petunia axillaris HOM05D006418 ORTHO05D008063 3.5e-153 545.0 296 85.5
CiPaw.01G053600 Carya illinoinensis HOM05D006418 ORTHO05D008063 4.5e-153 544.7 298 83.2
FAN01G2003 Fragaria x ananassa HOM05D006418 ORTHO05D008063 4.5e-153 544.7 297 83.2
Glyma.03G017600 Glycine max HOM05D006418 ORTHO05D008063 4.5e-153 544.7 295 85.1
Sabra02G0121400 Salix brachista HOM05D006418 ORTHO05D008063 4.5e-153 544.7 294 85.7
FAN03G2411 Fragaria x ananassa HOM05D006418 ORTHO05D008063 5.9e-153 544.3 296 83.8
ECA236G1148 Erigeron canadensis HOM05D006418 ORTHO05D008063 1.3e-152 543.1 297 84.2
THA.LOC104827683 Tarenaya hassleriana HOM05D006418 ORTHO05D008063 1.3e-152 543.1 297 83.8
Cc02_g37230 Coffea canephora HOM05D006418 ORTHO05D008063 1.7e-152 542.7 297 84.8
Ciclev10021113m.g Citrus clementina HOM05D006418 ORTHO05D008063 2.3e-152 542.3 296 83.8
RcHm_v2.0_Chr1g0352261 Rosa chinensis HOM05D006418 ORTHO05D008063 2.9e-152 542.0 297 83.8
PGSC0003DMG400017054 Solanum tuberosum HOM05D006418 ORTHO05D008063 5.0e-152 541.2 295 84.7
Sopen01g037560 Solanum pennellii HOM05D006418 ORTHO05D008063 8.6e-152 540.4 295 84.4
Eucgr.E00217 Eucalyptus grandis HOM05D006418 ORTHO05D008063 2.5e-151 538.9 298 82.6
COL.COLO4_12625 Corchorus olitorius HOM05D006418 ORTHO05D008063 3.3e-151 538.5 295 83.1
Solyc01g091780.4 Solanum lycopersicum HOM05D006418 ORTHO05D008063 4.3e-151 538.1 295 84.1
Gorai.007G095100 Gossypium raimondii HOM05D006418 ORTHO05D008063 9.5e-151 537.0 297 81.8
PGR042G1311 Punica granatum HOM05D006418 ORTHO05D008063 9.5e-151 537.0 297 83.5
Aa31LG10G15180 Aethionema arabicum HOM05D006418 ORTHO05D008063 1.2e-150 536.6 297 83.2
CAN.G170.50 Capsicum annuum HOM05D006418 ORTHO05D008063 1.2e-150 536.6 296 83.1
Migut.B01688 Erythranthe guttata HOM05D006418 ORTHO05D008063 1.2e-150 536.6 298 83.9
Lalb_Chr10g0097531 Lupinus albus HOM05D006418 ORTHO05D008063 1.2e-150 536.6 295 83.1
DCAR_025170 Daucus carota HOM05D006418 ORTHO05D008063 1.6e-150 536.2 303 82.5
Hund27325 Selenicereus undatus HOM05D006418 ORTHO05D008063 2.8e-150 535.4 297 81.5
HanXRQChr06g0169031 Helianthus annuus HOM05D006418 ORTHO05D008063 3.6e-150 535.0 297 82.8
Ca_23755_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 4.7e-150 534.6 297 82.2
VMungo0331G0376 Vigna mungo HOM05D006418 ORTHO05D008063 6.1e-150 534.3 295 83.7
Gohir.D11G089100 Gossypium hirsutum HOM05D006418 ORTHO05D008063 8.0e-150 533.9 297 81.5
PSO063G7157 Papaver somniferum HOM05D006418 ORTHO05D008063 1.0e-149 533.5 298 81.9
ClCG05G001910 Citrullus lanatus HOM05D006418 ORTHO05D008063 2.3e-149 532.3 296 82.1
Medtr8g032700 Medicago truncatula HOM05D006418 ORTHO05D008063 2.3e-149 532.3 297 82.5
EL10Ac1g00963 Beta vulgaris HOM05D006418 ORTHO05D008063 1.2e-148 530.0 296 81.4
Thhalv10006098m.g Eutrema salsugineum HOM05D006418 ORTHO05D008063 2.0e-148 529.3 297 82.2
Carub.0005s2773 Capsella rubella HOM05D006418 ORTHO05D008063 4.4e-148 528.1 297 82.2
Phvul.010G092700 Phaseolus vulgaris HOM05D006418 ORTHO05D008063 4.4e-148 528.1 295 82.0
AT3G61080 Arabidopsis thaliana HOM05D006418 ORTHO05D008063 5.7e-148 527.7 297 80.8
CARHR171390 Cardamine hirsuta HOM05D006418 ORTHO05D008063 9.8e-148 526.9 296 82.1
AL5G43290 Arabidopsis lyrata HOM05D006418 ORTHO05D008063 1.3e-147 526.6 296 80.7
Nitab4.5_0004550g0130 Nicotiana tabacum HOM05D006418 ORTHO05D008063 1.4e-146 523.1 306 80.7
CiPaw.01G023800 Carya illinoinensis HOM05D006418 ORTHO05D008063 2.0e-145 519.2 300 79.3
Sp5g02280 Schrenkiella parvula HOM05D006418 ORTHO05D008063 2.0e-145 519.2 297 80.1
Os03g0117800 Oryza sativa ssp. japonica HOM05D006418 ORTHO05D008063 2.7e-145 518.8 297 79.8
BcaC08g45098 Brassica carinata HOM05D006418 ORTHO05D008063 1.0e-144 516.9 298 80.5
BcaB02g07390 Brassica carinata HOM05D006418 ORTHO05D008063 1.7e-144 516.2 297 80.5
C06p27060 Brassica napus HOM05D006418 ORTHO05D008063 1.2e-142 510.0 305 78.7
BolC6t37878H Brassica oleracea HOM05D006418 ORTHO05D008063 1.2e-142 510.0 305 78.7
Zm00001eb001200 Zea mays HOM05D006418 ORTHO05D008063 1.2e-142 510.0 295 79.0
A07p25300 Brassica napus HOM05D006418 ORTHO05D008063 8.0e-142 507.3 305 78.4
HPP92_014577 Vanilla planifolia HOM05D006418 ORTHO05D008063 8.0e-142 507.3 295 78.3
ATR0757G200 Amborella trichopoda HOM05D006418 ORTHO05D008063 1.8e-141 506.1 297 77.4
SalBow3G2367 Salvia bowleyana HOM05D006418 ORTHO05D008063 1.8e-141 506.1 295 80.0
BraA07t30173Z Brassica rapa HOM05D006418 ORTHO05D008063 3.1e-141 505.4 305 77.4
MELO3C006151.2 Cucumis melo HOM05D006418 ORTHO05D008063 9.8e-140 500.4 337 71.5
Manes.01G262400 Manihot esculenta HOM05D006418 ORTHO05D008063 6.8e-133 477.6 250 88.4
Atru.chr5.403 Acer truncatum HOM05D006418 ORTHO05D008063 1.5e-127 459.9 241 86.3
Prupe.2G154600 Prunus persica HOM05D006418 ORTHO05D008063 2.5e-127 459.1 240 85.8
SGA_v2.0_scaffold95G28870 Striga asiatica HOM05D006418 ORTHO05D008063 2.5e-127 459.1 308 74.7
Thecc.01G368600 Theobroma cacao HOM05D006418 ORTHO05D008063 2.5e-127 459.1 254 83.5
CDE01G0065 Ceratophyllum demersum HOM05D006418 ORTHO05D008063 7.3e-127 457.6 260 80.4
Psat4g151800 Pisum sativum HOM05D006418 ORTHO05D008063 4.7e-126 454.9 249 82.7
Oeu024416.1 Olea europaea HOM05D006418 ORTHO05D008063 5.2e-125 451.4 261 82.8
CsaV3_3G009310 Cucumis sativus L. HOM05D006418 ORTHO05D008063 1.7e-123 446.4 240 83.8
Lsat_1_v5_gn_7_8501 Lactuca sativa HOM05D006418 ORTHO05D008063 1.7e-123 446.4 261 79.7
AUR62004291 Chenopodium quinoa HOM05D006418 ORTHO05D008063 2.9e-123 445.7 250 81.2
Sed0024588 Sechium edule HOM05D006418 ORTHO05D008063 1.2e-121 440.3 240 82.5
Mapoly0138s0005 Marchantia polymorpha HOM05D006418 ORTHO05D008063 9.6e-119 430.6 292 68.2
AagrBONN_evm.TU.Sc2ySwM_344.2134 Anthoceros agrestis HOM05D006418 ORTHO05D008063 8.9e-117 424.1 291 66.7
QL08p050652 Quercus lobata HOM05D006418 ORTHO05D008063 2.9e-115 419.1 226 85.8
CBR_g38943 Chara braunii HOM05D006418 ORTHO05D008063 7.1e-114 414.5 292 64.4
Pp3c15_5030 Physcomitrium patens HOM05D006418 ORTHO05D008063 1.6e-113 413.3 293 64.5
SMO356G0133 Selaginella moellendorffii HOM05D006418 ORTHO05D008063 2.1e-110 402.9 287 64.5
Cpa.g.sc18.197 Carica papaya HOM05D006418 ORTHO05D008063 1.6e-105 386.7 218 80.7
Hma1.2p1_0033F.1_g020640 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 1.3e-104 383.6 255 77.3
unitig_22.g5367 Utricularia gibba HOM05D006418 ORTHO05D008063 1.4e-101 373.6 203 82.8
Cc02_g37660 Coffea canephora HOM05D006418 ORTHO05D008063 2.0e-100 369.8 207 82.1
MBI12_g25033_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 3.9e-96 355.5 224 75.0
Gohir.A11G085000 Gossypium hirsutum HOM05D006418 ORTHO05D008063 1.9e-95 353.2 181 85.1
SEGI_14549 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 1.6e-73 280.4 170 75.9
Cre12.g542202 Chlamydomonas reinhardtii HOM05D006418 ORTHO05D008063 5.3e-69 265.4 297 47.5
MCO14G366 Micromonas commoda HOM05D006418 ORTHO05D008063 2.0e-68 263.5 296 47.6
Sc26g0001060 Simmondsia chinensis HOM05D001335 ORTHO05D001184 7.9e-65 251.5 177 68.9
Haze_15226 Corylus avellana HOM05D006418 ORTHO05D008063 1.4e-61 240.7 136 84.6
arahy.Tifrunner.gnm1.ann1.N7AMXP Arachis hypogaea HOM05D006418 ORTHO05D008063 3.5e-60 236.1 134 82.8
FAN10G0301 Fragaria x ananassa HOM05D006418 ORTHO05D008063 2.3e-56 223.4 177 62.7
PRCOL_00000121 Prasinoderma coloniale HOM05D006418 ORTHO05D008063 9.1e-53 211.5 259 43.6
Sabra14G0055300 Salix brachista HOM05D006418 ORTHO05D008063 3.8e-43 179.5 250 42.8
Pp3c1_6480 Physcomitrium patens HOM05D006418 ORTHO05D008063 1.1e-42 177.9 278 36.3
Sc26g0001070 Simmondsia chinensis HOM05D006418 ORTHO05D008063 1.1e-42 177.9 136 66.9
Glyma.07G078900 Glycine max HOM05D006418 ORTHO05D008063 1.9e-42 177.2 148 64.2
Gohir.A11G084900 Gossypium hirsutum HOM05D006418 ORTHO05D008063 1.1e-37 161.4 98 76.5
Ca_28970_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 2.1e-33 147.1 280 34.3
Cfa024407 Carpinus fangiana HOM05D006418 ORTHO05D008063 7.0e-29 132.1 277 31.8
ATR0620G127 Amborella trichopoda HOM05D006418 ORTHO05D008063 3.5e-28 129.8 157 43.9
unitig_22.g5366 Utricularia gibba HOM05D003447 ORTHO05D003967 1.0e-19 101.7 62 75.8
CiPaw.01G052800 Carya illinoinensis HOM05D006418 ORTHO05D008063 1.8e-16 90.9 51 80.4
Cc00_g22860 Coffea canephora HOM05D006418 ORTHO05D008063 5.2e-16 89.4 57 73.7
Actinidia27830 Actinidia chinensis HOM05D006418 ORTHO05D008063 1.1e-13 81.6 41 87.8
SEGI_36912 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 2.3e-11 73.9 54 59.3
MBI16_g15528_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 8.6e-11 72.0 42 76.2
MBI11_g05318_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.4e-07 59.7 30 86.7
SEGI_18314 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 2.9e-06 57.0 68 44.1


User provided reference genes

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