Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0026F.1_g016930 Hydrangea macrophylla HOM05D006228 ORTHO05D007847 3.2e-181 638.3 314 100.0
Dinv34431 Davidia involucrata HOM05D006228 ORTHO05D007847 3.0e-155 552.0 313 85.0
Actinidia13913 Actinidia chinensis HOM05D006228 ORTHO05D007847 1.5e-143 513.1 313 78.6
CSS0000174 Camellia sinensis var. sinensis HOM05D006228 ORTHO05D007847 5.5e-141 504.6 310 78.7
CSS0026214 Camellia sinensis var. sinensis HOM05D006228 ORTHO05D007847 5.5e-141 504.6 310 79.0
TAR633G1830 Trochodendron aralioides HOM05D006228 ORTHO05D007847 7.9e-140 500.7 313 75.7
Rhsim09G0171700 Rhododendron simsii HOM05D006228 ORTHO05D007847 3.0e-139 498.8 330 73.9
Prupe.2G245100 Prunus persica HOM05D006228 ORTHO05D007847 3.7e-137 491.9 308 75.0
MD07G1212900 Malus domestica HOM05D006228 ORTHO05D007847 1.0e-134 483.8 309 74.1
Potri.008G063500 Populus trichocarpa HOM05D006228 ORTHO05D007847 1.7e-134 483.0 304 76.0
GSVIVG01016380001 Vitis vinifera HOM05D006228 ORTHO05D007847 5.0e-134 481.5 313 72.8
Lj1A949T58 Lonicera japonica HOM05D006228 ORTHO05D007847 5.5e-133 478.0 331 71.6
Manes.10G018500 Manihot esculenta HOM05D006228 ORTHO05D007847 1.2e-132 476.9 308 74.4
PGSC0003DMG400007303 Solanum tuberosum HOM05D006228 ORTHO05D007847 2.3e-131 472.6 308 72.1
Solyc06g009690.3 Solanum lycopersicum HOM05D006228 ORTHO05D007847 3.9e-131 471.9 308 71.8
Haze_17175 Corylus avellana HOM05D006228 ORTHO05D007847 5.1e-131 471.5 313 73.2
CiPaw.01G295100 Carya illinoinensis HOM05D006228 ORTHO05D007847 6.7e-131 471.1 313 71.9
Sopen06g004350 Solanum pennellii HOM05D006228 ORTHO05D007847 6.7e-131 471.1 308 71.8
RcHm_v2.0_Chr1g0369221 Rosa chinensis HOM05D006228 ORTHO05D007847 2.6e-130 469.2 299 74.2
Thecc.10G027500 Theobroma cacao HOM05D006228 ORTHO05D007847 2.6e-130 469.2 303 73.6
TWI09G0225 Tripterygium wilfordii HOM05D006228 ORTHO05D007847 5.7e-130 468.0 310 70.3
Nn2g13585 Nelumbo nucifera HOM05D006228 ORTHO05D007847 9.7e-130 467.2 307 73.6
Cc02_g06990 Coffea canephora HOM05D006228 ORTHO05D007847 5.3e-128 461.5 312 71.2
Nitab4.5_0012179g0020 Nicotiana tabacum HOM05D006228 ORTHO05D007847 5.3e-128 461.5 327 69.4
CAN.G1280.21 Capsicum annuum HOM05D006228 ORTHO05D007847 7.0e-128 461.1 310 69.4
Ca_17139_v3 Cicer arietinum L. HOM05D006228 ORTHO05D007847 7.0e-128 461.1 313 70.0
Aqoxy1G00736 Aquilegia oxysepala HOM05D006228 ORTHO05D007847 1.2e-127 460.3 303 71.6
PSO384G3635 Papaver somniferum HOM05D006228 ORTHO05D007847 2.0e-127 459.5 297 72.1
TPR.G29810 Trifolium pratense HOM05D006228 ORTHO05D007847 2.0e-127 459.5 313 69.3
MBI14_g08147_MAGBIO Magnolia biondii HOM05D006228 ORTHO05D007847 3.5e-127 458.8 303 71.3
Aqoxy3G00589 Aquilegia oxysepala HOM05D006228 ORTHO05D007847 4.5e-127 458.4 303 71.0
Peaxi162Scf00401g00030 Petunia axillaris HOM05D006228 ORTHO05D007847 1.3e-126 456.8 312 70.8
COL.COLO4_25614 Corchorus olitorius HOM05D006228 ORTHO05D007847 6.5e-126 454.5 302 71.9
FAN06G4757 Fragaria x ananassa HOM05D006228 ORTHO05D007847 6.5e-126 454.5 299 72.2
Sed0002982 Sechium edule HOM05D006228 ORTHO05D007847 6.5e-126 454.5 314 69.4
ClCG11G010510 Citrullus lanatus HOM05D006228 ORTHO05D007847 8.5e-126 454.1 314 67.8
FAN01G0169 Fragaria x ananassa HOM05D006228 ORTHO05D007847 1.1e-125 453.8 299 72.2
Glyma.18G031000 Glycine max HOM05D006228 ORTHO05D007847 1.5e-125 453.4 306 70.9
FAN03G1418 Fragaria x ananassa HOM05D006228 ORTHO05D007847 2.5e-125 452.6 299 72.2
Psat5g127520 Pisum sativum HOM05D006228 ORTHO05D007847 2.5e-125 452.6 312 68.3
Medtr3g070010 Medicago truncatula HOM05D006228 ORTHO05D007847 3.2e-125 452.2 311 69.1
Nitab4.5_0000278g0180 Nicotiana tabacum HOM05D006228 ORTHO05D007847 4.2e-125 451.8 307 71.3
FvH4_7g23870 Fragaria vesca HOM05D006228 ORTHO05D007847 5.5e-125 451.4 299 71.9
CsaV3_5G008840 Cucumis sativus L. HOM05D006228 ORTHO05D007847 1.2e-124 450.3 314 67.8
Cfa005508 Carpinus fangiana HOM05D006228 ORTHO05D007847 1.6e-124 449.9 318 69.2
Gohir.D06G170400 Gossypium hirsutum HOM05D006228 ORTHO05D007847 6.1e-124 448.0 301 70.4
Gorai.010G199300 Gossypium raimondii HOM05D006228 ORTHO05D007847 6.1e-124 448.0 301 70.4
Lalb_Chr18g0052781 Lupinus albus HOM05D006228 ORTHO05D007847 3.0e-123 445.7 313 67.1
Lj6g0016911 Lotus japonicus HOM05D006228 ORTHO05D007847 4.0e-123 445.3 303 71.6
VMungo1383G2528 Vigna mungo HOM05D006228 ORTHO05D007847 4.0e-123 445.3 306 68.3
Gohir.A06G164900 Gossypium hirsutum HOM05D006228 ORTHO05D007847 2.0e-122 443.0 301 69.8
AUR62022833 Chenopodium quinoa HOM05D006228 ORTHO05D007847 2.6e-122 442.6 300 70.3
EL10Ac2g04780 Beta vulgaris HOM05D006228 ORTHO05D007847 4.4e-122 441.8 307 69.1
Oeu006660.1 Olea europaea HOM05D006228 ORTHO05D007847 1.4e-120 436.8 312 68.6
Migut.F00709 Erythranthe guttata HOM05D006228 ORTHO05D007847 2.4e-120 436.0 307 68.1
PSO585G0034 Papaver somniferum HOM05D006228 ORTHO05D007847 3.5e-119 432.2 291 70.1
SGA_v2.0_scaffold2G01060 Striga asiatica HOM05D006228 ORTHO05D007847 1.7e-118 429.9 309 67.6
THA.LOC104810050 Tarenaya hassleriana HOM05D006228 ORTHO05D007847 1.7e-118 429.9 301 68.4
Sabra08G0046800 Salix brachista HOM05D006228 ORTHO05D007847 2.2e-118 429.5 304 69.1
HanXRQChr09g0246891 Helianthus annuus HOM05D006228 ORTHO05D007847 2.9e-118 429.1 299 69.2
arahy.Tifrunner.gnm1.ann1.H1F5T1 Arachis hypogaea HOM05D006228 ORTHO05D007847 8.5e-118 427.6 320 65.3
ECA232G3403 Erigeron canadensis HOM05D006228 ORTHO05D007847 1.2e-116 423.7 304 68.1
AUR62012200 Chenopodium quinoa HOM05D006228 ORTHO05D007847 3.6e-116 422.2 304 65.8
Hund13827 Selenicereus undatus HOM05D006228 ORTHO05D007847 8.0e-116 421.0 365 59.5
Phvul.001G239600 Phaseolus vulgaris HOM05D006228 ORTHO05D007847 1.4e-115 420.2 306 66.0
MELO3C025144.2 Cucumis melo HOM05D006228 ORTHO05D007847 7.5e-114 414.5 320 64.1
Ah.16g103060 Amaranthus hybridus HOM05D006228 ORTHO05D007847 1.3e-113 413.7 306 65.7
vmacro10067 Vaccinium macrocarpon HOM05D006228 ORTHO05D007847 1.3e-113 413.7 372 60.5
PGR044G0451 Punica granatum HOM05D006228 ORTHO05D007847 4.8e-113 411.8 311 65.9
AL4G37490 Arabidopsis lyrata HOM05D006228 ORTHO05D007847 1.2e-111 407.1 302 64.2
Thhalv10016686m.g Eutrema salsugineum HOM05D006228 ORTHO05D007847 2.0e-111 406.4 293 66.6
Aa31LG5G19710 Aethionema arabicum HOM05D006228 ORTHO05D007847 5.0e-110 401.7 293 65.5
Duzib106G2031 Durio zibethinus HOM05D006228 ORTHO05D007847 5.0e-110 401.7 302 66.2
AT2G39910 Arabidopsis thaliana HOM05D006228 ORTHO05D007847 6.5e-110 401.4 302 63.2
Ciclev10031701m.g Citrus clementina HOM05D006228 ORTHO05D007847 1.5e-109 400.2 303 66.7
SHI03521 Sapria himalayana HOM05D006228 ORTHO05D007847 2.5e-109 399.4 305 64.3
SalBow5G2373 Salvia bowleyana HOM05D006228 ORTHO05D007847 5.5e-109 398.3 287 65.9
C03p26500 Brassica napus HOM05D006228 ORTHO05D007847 7.2e-109 397.9 298 63.8
BolC3t15036H Brassica oleracea HOM05D006228 ORTHO05D007847 1.2e-108 397.1 297 63.6
DCAR_011778 Daucus carota HOM05D006228 ORTHO05D007847 1.0e-107 394.0 310 63.9
Sp4g22220 Schrenkiella parvula HOM05D006228 ORTHO05D007847 1.8e-107 393.3 293 63.1
Lsat_1_v5_gn_9_63220 Lactuca sativa HOM05D006228 ORTHO05D007847 3.0e-107 392.5 288 68.4
BcaB01g03579 Brassica carinata HOM05D006228 ORTHO05D007847 5.2e-107 391.7 306 60.5
BraA03t11466Z Brassica rapa HOM05D006228 ORTHO05D007847 6.8e-107 391.3 300 62.0
ATR0580G418 Amborella trichopoda HOM05D006228 ORTHO05D007847 8.8e-107 391.0 313 60.4
A03p22360 Brassica napus HOM05D006228 ORTHO05D007847 1.5e-106 390.2 297 62.0
Atru.chr12.264 Acer truncatum HOM05D006228 ORTHO05D007847 1.3e-105 387.1 258 72.1
CARHR134830 Cardamine hirsuta HOM05D006228 ORTHO05D007847 1.3e-105 387.1 291 62.5
Carub.0004s2204 Capsella rubella HOM05D006228 ORTHO05D007847 3.7e-105 385.6 291 62.9
Sc11g0007370 Simmondsia chinensis HOM05D006228 ORTHO05D007847 6.3e-105 384.8 248 71.0
BcaC01g05454 Brassica carinata HOM05D006228 ORTHO05D007847 4.1e-104 382.1 300 61.0
FAN10G3493 Fragaria x ananassa HOM05D006228 ORTHO05D007847 1.6e-103 380.2 299 64.2
Zm00001eb226270 Zea mays HOM05D006228 ORTHO05D007847 1.3e-102 377.1 297 61.3
Os06g0694100 Oryza sativa ssp. japonica HOM05D006228 ORTHO05D007847 4.3e-101 372.1 301 59.5
Eucgr.J00246 Eucalyptus grandis HOM05D006228 ORTHO05D007847 7.8e-95 351.3 320 58.1
arahy.Tifrunner.gnm1.ann1.PGVU2S Arachis hypogaea HOM05D006228 ORTHO05D007847 4.0e-91 339.0 226 70.8
SEGI_03712 Sequoiadendron giganteum HOM05D006228 ORTHO05D007847 6.0e-87 325.1 298 52.7
unitig_747.g21715 Utricularia gibba HOM05D006228 ORTHO05D007847 6.0e-87 325.1 304 54.9
FAN06G0021 Fragaria x ananassa HOM05D006228 ORTHO05D007847 7.8e-79 298.1 186 74.2
CDE05G2573 Ceratophyllum demersum HOM05D006228 ORTHO05D007847 1.1e-77 294.3 227 62.6
Cpa.g.sc19.228 Carica papaya HOM05D006228 ORTHO05D007847 2.8e-60 236.5 303 45.2
Sed0008304 Sechium edule HOM05D006228 ORTHO05D007847 6.2e-60 235.3 314 46.5
QL08p062537 Quercus lobata HOM05D006228 ORTHO05D007847 4.0e-59 232.6 166 69.9
AagrBONN_evm.TU.Sc2ySwM_344.5121 Anthoceros agrestis HOM05D006228 ORTHO05D007847 9.9e-58 228.0 292 41.1
Actinidia00930 Actinidia chinensis HOM05D006228 ORTHO05D007847 4.9e-57 225.7 148 75.0
Mapoly0014s0032 Marchantia polymorpha HOM05D006228 ORTHO05D007847 3.2e-56 223.0 300 39.0
BcaB06g29116 Brassica carinata HOM05D006228 ORTHO05D007847 7.4e-53 211.8 225 49.8
Pp3c11_8050 Physcomitrium patens HOM05D006228 ORTHO05D007847 8.1e-52 208.4 269 39.8
RcHm_v2.0_Chr2g0110551 Rosa chinensis HOM05D006228 ORTHO05D007847 1.4e-51 207.6 143 68.5
BcaC02g07378 Brassica carinata HOM05D006228 ORTHO05D007847 1.8e-51 207.2 156 60.9
SMO273G0042 Selaginella moellendorffii HOM05D006228 ORTHO05D007847 3.1e-51 206.5 252 42.1
HPP92_018568 Vanilla planifolia HOM05D006228 ORTHO05D007847 6.0e-47 192.2 150 60.0
HPP92_018569 Vanilla planifolia HOM05D006228 ORTHO05D007847 1.6e-44 184.1 141 60.3
Actinidia25353 Actinidia chinensis HOM05D006228 ORTHO05D007847 1.7e-41 174.1 160 56.9
RcHm_v2.0_Chr1g0339731 Rosa chinensis HOM05D006228 ORTHO05D007847 3.5e-39 166.4 143 59.4
SMO147G0063 Selaginella moellendorffii HOM05D006228 ORTHO05D007847 2.0e-34 150.6 300 30.3
BolC4t28269H Brassica oleracea HOM05D006228 ORTHO05D007847 2.6e-34 150.2 162 48.8
MSTRG.8975 Avicennia marina HOM05D006228 ORTHO05D007847 3.7e-28 129.8 97 67.0
MCO16G020 Micromonas commoda HOM05D006228 ORTHO05D007847 1.7e-20 104.4 253 25.3
Cre01.g048600 Chlamydomonas reinhardtii HOM05D006228 ORTHO05D007847 2.0e-18 97.4 186 30.1
arahy.Tifrunner.gnm1.ann1.DSNI2G Arachis hypogaea HOM05D002669 ORTHO05D003001 4.2e-16 89.7 65 60.0
arahy.Tifrunner.gnm1.ann1.YTZ5F3 Arachis hypogaea HOM05D006228 ORTHO05D007847 4.2e-16 89.7 65 61.5
C04p67680 Brassica napus HOM05D006228 ORTHO05D007847 2.0e-13 80.9 108 41.7
Nitab4.5_0001379g0140 Nicotiana tabacum HOM05D006228 ORTHO05D007847 2.3e-06 57.4 29 82.8


User provided reference genes

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