Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0010F.1_g006410 Hydrangea macrophylla HOM05D006739 ORTHO05D008402 9.8e-102 375.2 252 100.0
Dinv44882 Davidia involucrata HOM05D006739 ORTHO05D008402 2.8e-56 224.2 256 73.0
CSS0036090 Camellia sinensis var. sinensis HOM05D006739 ORTHO05D008402 3.8e-45 187.2 182 59.9
CSS0033703 Camellia sinensis var. sinensis HOM05D006739 ORTHO05D008402 3.2e-44 184.1 260 66.2
RcHm_v2.0_Chr7g0233521 Rosa chinensis HOM05D006739 ORTHO05D008402 5.1e-42 176.8 252 64.3
MD15G1390100 Malus domestica HOM05D006739 ORTHO05D008402 1.1e-41 175.6 257 65.4
Cfa013823 Carpinus fangiana HOM05D006739 ORTHO05D008402 4.3e-41 173.7 182 56.0
Ciclev10000605m.g Citrus clementina HOM05D006739 ORTHO05D008402 1.3e-40 172.2 258 63.2
Haze_22495 Corylus avellana HOM05D006739 ORTHO05D008402 3.7e-40 170.6 182 56.0
MD08G1206600 Malus domestica HOM05D006739 ORTHO05D008402 8.2e-40 169.5 181 58.0
TAR628G0153 Trochodendron aralioides HOM05D006739 ORTHO05D008402 4.1e-39 167.2 264 61.0
Prupe.1G539000 Prunus persica HOM05D006739 ORTHO05D008402 1.9e-36 158.3 257 61.9
TAR152G0001 Trochodendron aralioides HOM05D006739 ORTHO05D008402 4.2e-36 157.1 230 53.5
FAN08G0673 Fragaria x ananassa HOM05D006739 ORTHO05D008402 5.5e-36 156.8 252 61.9
EL10Ac1g00466 Beta vulgaris HOM05D006739 ORTHO05D008402 2.3e-34 151.4 254 59.1
FvH4_5g34030 Fragaria vesca HOM05D006739 ORTHO05D008402 3.0e-34 151.0 252 60.7
FAN18G3137 Fragaria x ananassa HOM05D006739 ORTHO05D008402 3.0e-34 151.0 252 60.7
Eucgr.F02164 Eucalyptus grandis HOM05D006739 ORTHO05D008402 6.7e-34 149.8 223 57.0
Rhsim07G0214200 Rhododendron simsii HOM05D006739 ORTHO05D008402 6.7e-34 149.8 254 63.0
Atru.chr13.953 Acer truncatum HOM05D006739 ORTHO05D008402 8.8e-34 149.4 260 56.9
CiPaw.08G057600 Carya illinoinensis HOM05D006739 ORTHO05D008402 3.3e-33 147.5 190 46.3
QL12p039876 Quercus lobata HOM05D006739 ORTHO05D008402 9.7e-33 146.0 257 61.9
Migut.N00013 Erythranthe guttata HOM05D006739 ORTHO05D008402 2.4e-31 141.4 257 61.1
TWI56G0071 Tripterygium wilfordii HOM05D006739 ORTHO05D008402 1.2e-30 139.0 172 49.4
Nitab4.5_0002667g0060 Nicotiana tabacum HOM05D006739 ORTHO05D008402 1.5e-30 138.7 217 54.4
Sc15g0003370 Simmondsia chinensis HOM05D006739 ORTHO05D008402 4.5e-30 137.1 220 55.9
Actinidia19611 Actinidia chinensis HOM05D006739 ORTHO05D008402 1.3e-29 135.6 147 55.8
vmacro04630 Vaccinium macrocarpon HOM05D006739 ORTHO05D008402 1.7e-29 135.2 168 53.6
Ah.05g171720 Amaranthus hybridus HOM05D006739 ORTHO05D008402 2.9e-29 134.4 256 56.2
Duzib093G0111 Durio zibethinus HOM05D006739 ORTHO05D008402 3.8e-29 134.0 262 57.6
Nitab4.5_0002667g0050 Nicotiana tabacum HOM05D006739 ORTHO05D008402 5.0e-29 133.7 217 53.5
Manes.05G187600 Manihot esculenta HOM05D006739 ORTHO05D008402 6.5e-29 133.3 174 46.0
Sabra02G0086200 Salix brachista HOM05D006739 ORTHO05D008402 6.5e-29 133.3 166 48.8
Potri.002G109500 Populus trichocarpa HOM05D006739 ORTHO05D008402 8.5e-29 132.9 253 58.9
MSTRG.24837 Avicennia marina HOM05D006739 ORTHO05D008402 1.9e-28 131.7 150 70.7
Actinidia10267 Actinidia chinensis HOM05D006739 ORTHO05D008402 5.5e-28 130.2 218 53.2
MBI16_g36544_MAGBIO Magnolia biondii HOM05D006739 ORTHO05D008402 3.6e-27 127.5 259 57.9
Thecc.08G075400 Theobroma cacao HOM05D006739 ORTHO05D008402 3.9e-26 124.0 262 55.7
DCAR_019326 Daucus carota HOM05D006739 ORTHO05D008402 6.7e-26 123.2 176 43.2
AUR62014385 Chenopodium quinoa HOM05D006739 ORTHO05D008402 1.5e-25 122.1 210 61.0
ClCG08G011830 Citrullus lanatus HOM05D006739 ORTHO05D008402 2.6e-25 121.3 240 58.8
ECA247G1663 Erigeron canadensis HOM05D006739 ORTHO05D008402 4.4e-25 120.6 252 52.8
Sopen06g003030 Solanum pennellii HOM05D006739 ORTHO05D008402 4.4e-25 120.6 256 46.9
TAR381G0861 Trochodendron aralioides HOM05D006739 ORTHO05D008402 7.4e-25 119.8 183 45.9
Oeu020282.1 Olea europaea HOM05D006739 ORTHO05D008402 2.2e-24 118.2 156 79.5
Lsat_1_v5_gn_1_781 Lactuca sativa HOM05D006739 ORTHO05D008402 4.8e-24 117.1 217 49.8
Peaxi162Scf01212g00003 Petunia axillaris HOM05D006739 ORTHO05D008402 3.1e-23 114.4 145 66.2
Phvul.009G145100 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 3.1e-23 114.4 261 55.2
PGSC0003DMG400014713 Solanum tuberosum HOM05D006739 ORTHO05D008402 4.1e-23 114.0 130 70.0
PGSC0003DMG400027357 Solanum tuberosum HOM05D006739 ORTHO05D008402 4.1e-23 114.0 130 70.0
VMungo1309G0048 Vigna mungo HOM05D006739 ORTHO05D008402 9.1e-23 112.8 264 53.8
COL.COLO4_35303 Corchorus olitorius HOM05D006739 ORTHO05D008402 3.5e-22 110.9 169 44.4
AUR62019126 Chenopodium quinoa HOM05D006739 ORTHO05D008402 5.9e-22 110.2 165 72.1
Glyma.06G092600 Glycine max HOM05D006739 ORTHO05D008402 7.7e-22 109.8 260 56.9
Aqoxy5G01872 Aquilegia oxysepala HOM05D006739 ORTHO05D008402 2.9e-21 107.8 258 54.3
MELO3C011106.2 Cucumis melo HOM05D006739 ORTHO05D008402 3.8e-21 107.5 260 53.1
PSO761G0270 Papaver somniferum HOM05D006739 ORTHO05D008402 5.0e-21 107.1 204 61.8
CsaV3_2G030450 Cucumis sativus L. HOM05D006739 ORTHO05D008402 6.5e-21 106.7 257 52.9
PSO700G0042 Papaver somniferum HOM05D006739 ORTHO05D008402 1.9e-20 105.1 207 62.3
Hund26855 Selenicereus undatus HOM05D006739 ORTHO05D008402 2.5e-20 104.8 209 38.8
THA.LOC104816789 Tarenaya hassleriana HOM05D006739 ORTHO05D008402 4.2e-20 104.0 168 56.0
Hund26833 Selenicereus undatus HOM05D006739 ORTHO05D008402 5.5e-20 103.6 215 49.8
Glyma.04G090900 Glycine max HOM05D006739 ORTHO05D008402 7.2e-20 103.2 258 55.4
Sed0004950 Sechium edule HOM05D006739 ORTHO05D008402 7.2e-20 103.2 181 67.4
Carub.0001s0928 Capsella rubella HOM05D006739 ORTHO05D008402 2.1e-19 101.7 169 53.3
ATR0800G015 Amborella trichopoda HOM05D006739 ORTHO05D008402 3.6e-19 100.9 180 51.7
AT1G09900 Arabidopsis thaliana HOM05D006739 ORTHO05D008402 3.6e-19 100.9 165 54.5
SalBow5G4649 Salvia bowleyana HOM05D006739 ORTHO05D008402 4.7e-19 100.5 188 64.4
AL1G20500 Arabidopsis lyrata HOM05D006739 ORTHO05D008402 8.0e-19 99.8 156 57.7
CARHR009960 Cardamine hirsuta HOM05D006739 ORTHO05D008402 8.0e-19 99.8 222 46.4
Sp1g08530 Schrenkiella parvula HOM05D006739 ORTHO05D008402 8.0e-19 99.8 205 59.5
HanXRQChr11g0324241 Helianthus annuus HOM05D006739 ORTHO05D008402 3.0e-18 97.8 59 78.0
A06p06610 Brassica napus HOM05D006739 ORTHO05D008402 6.8e-18 96.7 200 59.5
Gohir.D06G029600 Gossypium hirsutum HOM05D006739 ORTHO05D008402 6.8e-18 96.7 185 65.4
Gorai.010G032500 Gossypium raimondii HOM05D006739 ORTHO05D008402 6.8e-18 96.7 185 65.4
C05p08020 Brassica napus HOM05D006739 ORTHO05D008402 8.8e-18 96.3 200 60.0
Hund26854 Selenicereus undatus HOM05D006739 ORTHO05D008402 8.8e-18 96.3 216 35.6
BraA06t23875Z Brassica rapa HOM05D006739 ORTHO05D008402 1.2e-17 95.9 200 59.5
Duzib116G0618 Durio zibethinus HOM05D006739 ORTHO05D008402 1.5e-17 95.5 224 45.1
Gohir.A06G030375 Gossypium hirsutum HOM05D006739 ORTHO05D008402 1.5e-17 95.5 185 64.9
Aa31LG1G4990 Aethionema arabicum HOM05D006739 ORTHO05D008402 2.0e-17 95.1 194 60.8
DCAR_012846 Daucus carota HOM05D006739 ORTHO05D008402 2.0e-17 95.1 183 41.0
arahy.Tifrunner.gnm1.ann1.M3C1JT Arachis hypogaea HOM05D006739 ORTHO05D008402 2.6e-17 94.7 226 34.1
arahy.Tifrunner.gnm1.ann1.CH37P4 Arachis hypogaea HOM05D006739 ORTHO05D008402 4.4e-17 94.0 226 42.9
Lj1g0027306 Lotus japonicus HOM05D006739 ORTHO05D008402 5.7e-17 93.6 166 41.0
BcaC05g24834 Brassica carinata HOM05D006739 ORTHO05D008402 7.5e-17 93.2 206 58.3
VMungo0647G0534 Vigna mungo HOM05D006739 ORTHO05D008402 1.3e-16 92.4 220 35.0
CAN.G941.26 Capsicum annuum HOM05D006739 ORTHO05D008402 1.7e-16 92.0 96 79.2
Cpa.g.sc177.11 Carica papaya HOM05D006739 ORTHO05D008402 1.7e-16 92.0 134 45.5
BolC5t29554H Brassica oleracea HOM05D006739 ORTHO05D008402 2.2e-16 91.7 200 58.5
PGR042G0142 Punica granatum HOM05D006739 ORTHO05D008402 3.7e-16 90.9 159 69.8
Hund26853 Selenicereus undatus HOM05D006739 ORTHO05D008402 4.1e-15 87.4 214 45.8
Hund26842 Selenicereus undatus HOM05D006739 ORTHO05D008402 4.5e-14 84.0 158 55.1
Ca_05489_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 5.9e-14 83.6 149 38.3
Ca_29619_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 5.9e-14 83.6 149 38.3
Cc10_g08260 Coffea canephora HOM05D008425 ORTHO05D010555 1.0e-13 82.8 109 83.5
Oeu012210.1 Olea europaea HOM05D006739 ORTHO05D008402 2.2e-13 81.6 74 81.1
CDE07G2071 Ceratophyllum demersum HOM05D006739 ORTHO05D008402 8.5e-13 79.7 170 37.6
Glyma.14G184200 Glycine max HOM05D006739 ORTHO05D008402 1.5e-12 79.0 152 53.9
CDE06G1140 Ceratophyllum demersum HOM05D002753 ORTHO05D003097 2.5e-12 78.2 151 51.7
Glyma.02G216900 Glycine max HOM05D006739 ORTHO05D008402 2.5e-12 78.2 148 54.1
Phvul.008G183900 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 2.5e-12 78.2 100 47.0
Phvul.008G184000 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 5.5e-12 77.0 108 45.4
VMungo0647G1229 Vigna mungo HOM05D006739 ORTHO05D008402 7.2e-12 76.6 108 43.5
CDE04G0064 Ceratophyllum demersum HOM05D006739 ORTHO05D008402 1.2e-11 75.9 96 46.9
Actinidia19612 Actinidia chinensis HOM05D006739 ORTHO05D008402 2.7e-11 74.7 109 82.6
Ca_15539_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 4.7e-11 73.9 170 61.2
Dinv22007 Davidia involucrata HOM05D006739 ORTHO05D008402 6.1e-11 73.6 109 78.0
CANSAT25G1844 Cannabis sativa HOM05D006739 ORTHO05D008402 8.0e-11 73.2 100 48.0
SGA_v2.0_scaffold123G33426 Striga asiatica HOM05D006739 ORTHO05D008402 1.8e-10 72.0 105 44.8
MBI16_g14339_MAGBIO Magnolia biondii HOM05D006739 ORTHO05D008402 8.8e-10 69.7 74 77.0
Psat5g018720 Pisum sativum HOM05D006739 ORTHO05D008402 1.7e-08 65.5 166 31.9
CDE01G0171 Ceratophyllum demersum HOM05D007620 ORTHO05D009568 6.3e-08 63.5 92 33.7
HPP92_004375 Vanilla planifolia HOM05D006739 ORTHO05D008402 1.2e-06 59.3 56 55.4
TPR.G15758 Trifolium pratense HOM05D000069 ORTHO05D001849 2.7e-06 58.2 58 50.0
Phvul.008G151824 Phaseolus vulgaris HOM05D007620 ORTHO05D009568 5.9e-06 57.0 85 38.8


User provided reference genes

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