Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0009F.1_g005960 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 9.7e-155 550.1 267 100.0
Hma1.2p1_0009F.1_g005970 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 9.7e-155 550.1 267 100.0
TWI14G0600 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 8.5e-135 483.8 267 85.0
GSVIVG01018274001 Vitis vinifera HOM05D006055 ORTHO05D007480 1.5e-134 483.0 267 85.0
CSS0024076 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 1.6e-133 479.6 267 84.6
CSS0048269 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 1.6e-133 479.6 267 84.6
Actinidia12146 Actinidia chinensis HOM05D006055 ORTHO05D007480 2.1e-133 479.2 266 85.0
Thecc.01G394500 Theobroma cacao HOM05D006055 ORTHO05D007480 6.1e-133 477.6 267 85.0
Manes.05G054600 Manihot esculenta HOM05D006055 ORTHO05D007480 2.3e-132 475.7 267 84.3
CiPaw.13G026500 Carya illinoinensis HOM05D006055 ORTHO05D007480 3.4e-131 471.9 267 83.5
Nitab4.5_0013736g0020 Nicotiana tabacum HOM05D006055 ORTHO05D007480 5.7e-131 471.1 267 83.9
Sopen01g036070 Solanum pennellii HOM05D006055 ORTHO05D007480 9.8e-131 470.3 267 83.9
Duzib138G0472 Durio zibethinus HOM05D006055 ORTHO05D007480 2.8e-130 468.8 267 82.8
Solyc01g090280.4 Solanum lycopersicum HOM05D006055 ORTHO05D007480 4.8e-130 468.0 267 83.5
TAR375G0976 Trochodendron aralioides HOM05D006055 ORTHO05D007480 4.8e-130 468.0 267 82.0
Gohir.A08G029400 Gossypium hirsutum HOM05D006055 ORTHO05D007480 6.3e-130 467.6 267 83.5
MD07G1108400 Malus domestica HOM05D006055 ORTHO05D007480 6.3e-130 467.6 267 83.1
CANSAT21G1800 Cannabis sativa HOM05D006055 ORTHO05D007480 8.3e-130 467.2 267 82.4
QL04p030364 Quercus lobata HOM05D006055 ORTHO05D007480 1.4e-129 466.5 267 81.3
Atru.chr5.130 Acer truncatum HOM05D006055 ORTHO05D007480 1.8e-129 466.1 267 82.0
CANSAT21G1956 Cannabis sativa HOM05D006055 ORTHO05D007480 5.4e-129 464.5 267 82.0
COL.COLO4_12412 Corchorus olitorius HOM05D006055 ORTHO05D007480 5.4e-129 464.5 267 82.8
Nitab4.5_0000920g0150 Nicotiana tabacum HOM05D006055 ORTHO05D007480 9.1e-129 463.8 267 83.1
Dinv43619 Davidia involucrata HOM05D006055 ORTHO05D007480 1.2e-128 463.4 254 85.8
Peaxi162Scf00475g00522 Petunia axillaris HOM05D006055 ORTHO05D007480 1.6e-128 463.0 267 82.4
CAN.G1473.12 Capsicum annuum HOM05D006055 ORTHO05D007480 3.5e-128 461.8 269 82.5
Potri.014G047300 Populus trichocarpa HOM05D006055 ORTHO05D007480 4.5e-128 461.5 267 82.0
Prupe.2G131200 Prunus persica HOM05D006055 ORTHO05D007480 5.9e-128 461.1 267 81.6
vmacro13494 Vaccinium macrocarpon HOM05D006055 ORTHO05D007480 2.2e-127 459.1 262 83.6
FvH4_7g10160 Fragaria vesca HOM05D006055 ORTHO05D007480 5.0e-127 458.0 267 82.4
FAN01G2488 Fragaria x ananassa HOM05D006055 ORTHO05D007480 2.5e-126 455.7 275 80.7
TPR.G14105 Trifolium pratense HOM05D006055 ORTHO05D007480 4.2e-126 454.9 267 79.8
Psat0s3739g0040 Pisum sativum HOM05D006055 ORTHO05D007480 9.4e-126 453.8 267 79.4
FAN06G3912 Fragaria x ananassa HOM05D006055 ORTHO05D007480 3.6e-125 451.8 275 80.4
Eucgr.D01230 Eucalyptus grandis HOM05D006055 ORTHO05D007480 4.7e-125 451.4 267 80.5
Ca_08070_v3 Cicer arietinum L. HOM05D006055 ORTHO05D007480 1.0e-124 450.3 267 79.4
Lalb_Chr13g0290591 Lupinus albus HOM05D006055 ORTHO05D007480 1.4e-124 449.9 267 81.6
Ciclev10021096m.g Citrus clementina HOM05D006055 ORTHO05D007480 1.8e-124 449.5 267 80.1
MSTRG.28152 Avicennia marina HOM05D006055 ORTHO05D007480 2.3e-124 449.1 267 80.5
FAN10G0847 Fragaria x ananassa HOM05D006055 ORTHO05D007480 4.0e-124 448.4 275 79.3
Sed0027680 Sechium edule HOM05D006055 ORTHO05D007480 4.0e-124 448.4 267 79.4
Gorai.004G039000 Gossypium raimondii HOM05D006055 ORTHO05D007480 8.8e-124 447.2 309 71.8
Lj1g0005705 Lotus japonicus HOM05D006055 ORTHO05D007480 8.8e-124 447.2 267 79.0
RcHm_v2.0_Chr1g0347871 Rosa chinensis HOM05D006055 ORTHO05D007480 8.8e-124 447.2 267 80.1
Glyma.18G252000 Glycine max HOM05D006055 ORTHO05D007480 1.2e-123 446.8 267 80.1
Glyma.13G187100 Glycine max HOM05D006055 ORTHO05D007480 1.5e-123 446.4 267 78.7
Rhsim07G0035700 Rhododendron simsii HOM05D006055 ORTHO05D007480 5.7e-123 444.5 261 81.2
Migut.N01738 Erythranthe guttata HOM05D006055 ORTHO05D007480 7.5e-123 444.1 254 83.5
Gohir.D08G040100 Gossypium hirsutum HOM05D006055 ORTHO05D007480 7.5e-123 444.1 308 71.8
SGA_v2.0_scaffold43G16538 Striga asiatica HOM05D006055 ORTHO05D007480 1.3e-122 443.4 268 79.9
Medtr7g081715 Medicago truncatula HOM05D006055 ORTHO05D007480 1.7e-122 443.0 267 77.9
Nn1g00856 Nelumbo nucifera HOM05D006055 ORTHO05D007480 2.2e-122 442.6 267 79.8
Cpa.g.sc101.4 Carica papaya HOM05D006055 ORTHO05D007480 2.8e-122 442.2 267 78.7
MELO3C022277.2 Cucumis melo HOM05D006055 ORTHO05D007480 3.7e-122 441.8 267 77.2
PGR004G2446 Punica granatum HOM05D006055 ORTHO05D007480 1.4e-121 439.9 267 79.4
PGR144G0002 Punica granatum HOM05D006055 ORTHO05D007480 1.4e-121 439.9 267 79.4
arahy.Tifrunner.gnm1.ann1.C7FV9J Arachis hypogaea HOM05D006055 ORTHO05D007480 9.1e-121 437.2 279 76.0
arahy.Tifrunner.gnm1.ann1.JP1X2J Arachis hypogaea HOM05D006055 ORTHO05D007480 1.2e-120 436.8 279 76.0
CsaV3_6G008610 Cucumis sativus L. HOM05D006055 ORTHO05D007480 1.6e-120 436.4 267 76.8
PSO063G7218 Papaver somniferum HOM05D006055 ORTHO05D007480 2.0e-120 436.0 267 79.0
Cc02_g25090 Coffea canephora HOM05D006055 ORTHO05D007480 3.5e-120 435.3 254 83.1
Thhalv10008126m.g Eutrema salsugineum HOM05D006055 ORTHO05D007480 3.5e-120 435.3 267 77.2
FAN10G2268 Fragaria x ananassa HOM05D006055 ORTHO05D007480 3.5e-120 435.3 298 73.2
Sabra14G0034300 Salix brachista HOM05D006055 ORTHO05D007480 7.7e-120 434.1 267 78.3
BcaC07g42339 Brassica carinata HOM05D006055 ORTHO05D007480 1.0e-119 433.7 267 76.8
PSO832G3098 Papaver somniferum HOM05D006055 ORTHO05D007480 1.3e-119 433.3 267 78.7
AL1G10130 Arabidopsis lyrata HOM05D006055 ORTHO05D007480 2.9e-119 432.2 267 77.2
CARHR000230 Cardamine hirsuta HOM05D006055 ORTHO05D007480 1.9e-118 429.5 267 76.0
Carub.0001s0012 Capsella rubella HOM05D006055 ORTHO05D007480 1.4e-116 423.3 267 75.7
Sp1g00170 Schrenkiella parvula HOM05D006055 ORTHO05D007480 1.8e-116 422.9 267 74.2
ECA240G2571 Erigeron canadensis HOM05D006055 ORTHO05D007480 3.0e-116 422.2 267 76.8
BcaC07g42437 Brassica carinata HOM05D006055 ORTHO05D007480 1.2e-115 420.2 268 75.4
AT1G02100 Arabidopsis thaliana HOM05D006055 ORTHO05D007480 2.9e-114 415.6 267 74.9
Cfa011074 Carpinus fangiana HOM05D006055 ORTHO05D007480 2.9e-114 415.6 238 81.1
HanXRQChr13g0423211 Helianthus annuus HOM05D006055 ORTHO05D007480 1.4e-113 413.3 267 75.3
Aqoxy7G00862 Aquilegia oxysepala HOM05D006055 ORTHO05D007480 2.4e-113 412.5 254 78.3
SGA_v2.0_scaffold116G32294 Striga asiatica HOM05D006055 ORTHO05D007480 7.0e-113 411.0 301 69.1
CDE06G0143 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 2.0e-112 409.5 267 75.3
Duzib133G1573 Durio zibethinus HOM05D006055 ORTHO05D007480 2.0e-112 409.5 256 78.9
FAN03G3321 Fragaria x ananassa HOM05D006055 ORTHO05D007480 3.5e-112 408.7 270 74.8
Phvul.011G190400 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 5.0e-111 404.8 267 73.4
Hund17088 Selenicereus undatus HOM05D006055 ORTHO05D007480 1.9e-110 402.9 286 69.6
Os06g0140100 Oryza sativa ssp. japonica HOM05D006055 ORTHO05D007480 7.3e-110 401.0 266 72.2
FAN06G2084 Fragaria x ananassa HOM05D006055 ORTHO05D007480 9.5e-110 400.6 301 67.8
Oeu011253.1 Olea europaea HOM05D006055 ORTHO05D007480 2.8e-109 399.1 237 79.7
Ah.16g103830 Amaranthus hybridus HOM05D006055 ORTHO05D007480 2.2e-106 389.4 267 71.9
A09p69350 Brassica napus HOM05D006055 ORTHO05D007480 3.2e-105 385.6 289 67.1
BolC8t52925H Brassica oleracea HOM05D006055 ORTHO05D007480 3.2e-105 385.6 289 67.1
SalBow5G1596 Salvia bowleyana HOM05D006055 ORTHO05D007480 5.4e-105 384.8 320 63.8
Haze_02842 Corylus avellana HOM05D006055 ORTHO05D007480 2.0e-104 382.9 220 81.4
Lj9C557T10 Lonicera japonica HOM05D006055 ORTHO05D007480 1.0e-103 380.6 266 71.8
BraA09t42280Z Brassica rapa HOM05D006055 ORTHO05D007480 1.7e-103 379.8 290 67.2
Lsat_1_v5_gn_3_127241 Lactuca sativa HOM05D006055 ORTHO05D007480 1.7e-103 379.8 267 69.3
Sc02g0003100 Simmondsia chinensis HOM05D006055 ORTHO05D007480 1.7e-103 379.8 266 72.2
SalBow5G4451 Salvia bowleyana HOM05D006055 ORTHO05D007480 1.5e-102 376.7 330 61.8
ATR0057G026 Amborella trichopoda HOM05D006055 ORTHO05D007480 1.8e-100 369.8 265 69.4
AUR62013746 Chenopodium quinoa HOM05D006055 ORTHO05D007480 3.1e-100 369.0 239 74.1
Zm00001eb270250 Zea mays HOM05D006055 ORTHO05D007480 4.0e-100 368.6 266 68.0
Aa31LG1G11510 Aethionema arabicum HOM05D006055 ORTHO05D007480 5.2e-100 368.2 237 73.8
MD02G1211800 Malus domestica HOM05D006055 ORTHO05D007480 1.3e-98 363.6 218 78.9
Glyma.09G242700 Glycine max HOM05D006055 ORTHO05D007480 1.1e-97 360.5 236 74.2
MBI04_g33722_MAGBIO Magnolia biondii HOM05D006055 ORTHO05D007480 1.9e-94 349.7 267 66.7
Mapoly0013s0063 Marchantia polymorpha HOM05D006055 ORTHO05D007480 4.3e-94 348.6 265 63.0
unitig_578.g16712 Utricularia gibba HOM05D006055 ORTHO05D007480 9.5e-94 347.4 214 77.1
EL10Ac1g00759 Beta vulgaris HOM05D006055 ORTHO05D007480 4.4e-91 338.6 237 70.5
AUR62023405 Chenopodium quinoa HOM05D006055 ORTHO05D007480 4.9e-90 335.1 267 63.7
TWI14G1276 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 7.8e-88 327.8 187 83.4
AagrBONN_evm.TU.Sc2ySwM_344.4855 Anthoceros agrestis HOM05D006055 ORTHO05D007480 3.9e-87 325.5 266 60.9
C08p54160 Brassica napus HOM05D006055 ORTHO05D007480 3.9e-87 325.5 236 68.6
CDE06G0088 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 1.6e-85 320.1 220 72.3
SMO169G0267 Selaginella moellendorffii HOM05D006055 ORTHO05D007480 6.2e-85 318.2 265 58.9
Pp3c6_20710 Physcomitrium patens HOM05D006055 ORTHO05D007480 1.5e-83 313.5 266 58.6
ClCG06G002510 Citrullus lanatus HOM05D006055 ORTHO05D007480 5.6e-78 295.0 237 63.3
ECA240G0951 Erigeron canadensis HOM05D006055 ORTHO05D007480 4.8e-77 292.0 217 67.3
CBR_g29813 Chara braunii HOM05D006055 ORTHO05D007480 8.1e-77 291.2 267 53.9
SEGI_37557 Sequoiadendron giganteum HOM05D006055 ORTHO05D007480 2.6e-67 259.6 187 65.8
Cre04.g229350 Chlamydomonas reinhardtii HOM05D006055 ORTHO05D007480 8.4e-58 228.0 323 40.2
Gohir.A09G116600 Gossypium hirsutum HOM05D006055 ORTHO05D007480 5.9e-43 178.7 126 69.8
SHI13615 Sapria himalayana HOM05D006055 ORTHO05D007480 2.2e-42 176.8 107 72.0
MCO09G792 Micromonas commoda HOM05D006055 ORTHO05D007480 1.4e-41 174.1 275 37.1
PRCOL_00000228 Prasinoderma coloniale HOM05D006055 ORTHO05D007480 1.0e-39 167.9 273 38.5
Actinidia32500 Actinidia chinensis HOM05D006055 ORTHO05D007480 8.2e-37 158.3 130 60.8
HPP92_022088 Vanilla planifolia HOM05D006055 ORTHO05D007480 3.4e-35 152.9 112 66.1
VMungo1127G0075 Vigna mungo HOM05D006055 ORTHO05D007480 3.8e-34 149.4 99 74.7
Gohir.D08G159633 Gossypium hirsutum HOM05D006055 ORTHO05D007480 4.2e-33 146.0 97 74.2
Zm00001eb438620 Zea mays HOM05D006055 ORTHO05D007480 1.6e-19 100.9 82 58.5
MD02G1212000 Malus domestica HOM05D006055 ORTHO05D007480 8.5e-10 68.6 31 96.8


User provided reference genes

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