Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0007F.1_g005310 Hydrangea macrophylla HOM05D002054 ORTHO05D005362 1.2e-23 112.5 62 100.0
Hma1.2p1_0761F.1_g214310 Hydrangea macrophylla HOM05D002054 ORTHO05D005362 4.7e-12 73.9 60 63.3
Dinv02552 Davidia involucrata HOM05D002054 ORTHO05D005362 1.8e-11 72.0 61 57.4
QL04p043028 Quercus lobata HOM05D002054 ORTHO05D005362 3.4e-10 67.8 61 55.7
Peaxi162Scf00007g00182 Petunia axillaris HOM05D002054 ORTHO05D005362 4.4e-10 67.4 59 57.6
CSS0042574 Camellia sinensis var. sinensis HOM05D002054 ORTHO05D005362 4.9e-09 63.9 61 54.1
Lj3A930T58 Lonicera japonica HOM05D002054 ORTHO05D005362 4.9e-09 63.9 60 55.0
MD07G1067100 Malus domestica HOM05D002054 ORTHO05D005362 4.9e-09 63.9 61 52.5
Rhsim03G0104800 Rhododendron simsii HOM05D002054 ORTHO05D005362 4.9e-09 63.9 56 58.9
CAN.G640.25 Capsicum annuum HOM05D002054 ORTHO05D005362 1.1e-08 62.8 61 52.5
Nitab4.5_0006653g0050 Nicotiana tabacum HOM05D002054 ORTHO05D005362 1.1e-08 62.8 61 50.8
Nitab4.5_0008821g0030 Nicotiana tabacum HOM05D002054 ORTHO05D005362 1.1e-08 62.8 61 50.8
Solyc07g053190.4 Solanum lycopersicum HOM05D002054 ORTHO05D005362 1.1e-08 62.8 61 52.5
Sopen07g026750 Solanum pennellii HOM05D002054 ORTHO05D005362 1.1e-08 62.8 61 52.5
Actinidia31093 Actinidia chinensis HOM05D002054 ORTHO05D005362 1.9e-08 62.0 61 52.5
COL.COLO4_34385 Corchorus olitorius HOM05D002054 ORTHO05D005362 1.9e-08 62.0 61 50.8
Eucgr.G02706 Eucalyptus grandis HOM05D002054 ORTHO05D005362 1.9e-08 62.0 61 54.1
FAN01G1518 Fragaria x ananassa HOM05D002054 ORTHO05D005362 1.9e-08 62.0 61 50.8
FAN03G2655 Fragaria x ananassa HOM05D002054 ORTHO05D005362 1.9e-08 62.0 61 50.8
FAN06G2071 Fragaria x ananassa HOM05D002054 ORTHO05D005362 1.9e-08 62.0 61 50.8
FAN10G2249 Fragaria x ananassa HOM05D002054 ORTHO05D005362 1.9e-08 62.0 61 50.8
RcHm_v2.0_Chr1g0332951 Rosa chinensis HOM05D002054 ORTHO05D005362 1.9e-08 62.0 61 50.8
CiPaw.13G037500 Carya illinoinensis HOM05D002054 ORTHO05D005362 2.4e-08 61.6 61 47.5
Thecc.10G103600 Theobroma cacao HOM05D002054 ORTHO05D005362 2.4e-08 61.6 61 47.5
Lalb_Chr02g0151451 Lupinus albus HOM05D002054 ORTHO05D005362 4.1e-08 60.8 59 49.2
vmacro07231 Vaccinium macrocarpon HOM05D002054 ORTHO05D005362 4.1e-08 60.8 58 53.4
Actinidia34712 Actinidia chinensis HOM05D002054 ORTHO05D005362 7.1e-08 60.1 59 54.2
Haze_02583 Corylus avellana HOM05D002054 ORTHO05D005362 7.1e-08 60.1 61 49.2
GSVIVG01034750001 Vitis vinifera HOM05D002054 ORTHO05D005362 7.1e-08 60.1 61 54.1
Manes.10G057400 Manihot esculenta HOM05D002054 ORTHO05D005362 9.2e-08 59.7 59 55.9
Lalb_Chr21g0313271 Lupinus albus HOM05D002054 ORTHO05D005362 1.2e-07 59.3 59 49.2
Prupe.2G084200 Prunus persica HOM05D002054 ORTHO05D005362 1.2e-07 59.3 61 49.2
PGR142G4193 Punica granatum HOM05D002054 ORTHO05D005362 1.2e-07 59.3 61 50.8
Ciclev10030776m.g Citrus clementina HOM05D002054 ORTHO05D005362 1.6e-07 58.9 61 45.9
PGSC0003DMG400026179 Solanum tuberosum HOM05D002054 ORTHO05D005362 1.6e-07 58.9 53 54.7
Cc02_g09940 Coffea canephora HOM05D002054 ORTHO05D005362 2.1e-07 58.5 59 50.8
Gohir.A10G198200 Gossypium hirsutum HOM05D002054 ORTHO05D005362 2.1e-07 58.5 61 45.9
Gohir.D01G119300 Gossypium hirsutum HOM05D002054 ORTHO05D005362 2.1e-07 58.5 61 45.9
Gorai.002G145600 Gossypium raimondii HOM05D002054 ORTHO05D005362 2.1e-07 58.5 61 45.9
Oeu014439.1 Olea europaea HOM05D002054 ORTHO05D005362 2.1e-07 58.5 61 50.8
Oeu055045.1 Olea europaea HOM05D002054 ORTHO05D005362 2.1e-07 58.5 60 48.3
Ah.04g163740 Amaranthus hybridus HOM05D002054 ORTHO05D005362 2.7e-07 58.2 48 64.6
Sp6g38140 Schrenkiella parvula HOM05D002054 ORTHO05D005362 2.7e-07 58.2 61 50.8
Actinidia18585 Actinidia chinensis HOM05D002054 ORTHO05D005362 3.5e-07 57.8 56 55.4
Cfa011246 Carpinus fangiana HOM05D002054 ORTHO05D005362 3.5e-07 57.8 61 47.5
CiPaw.14G029800 Carya illinoinensis HOM05D002054 ORTHO05D005362 3.5e-07 57.8 61 45.9
MD02G1255000 Malus domestica HOM05D002054 ORTHO05D005362 3.5e-07 57.8 61 45.9
Gohir.A01G130300 Gossypium hirsutum HOM05D002054 ORTHO05D005362 6.0e-07 57.0 61 44.3
SalBow3G0957 Salvia bowleyana HOM05D002054 ORTHO05D005362 6.0e-07 57.0 61 49.2
SalBow3G2625 Salvia bowleyana HOM05D002054 ORTHO05D005362 6.0e-07 57.0 61 49.2
Gohir.D10G205300 Gossypium hirsutum HOM05D002054 ORTHO05D005362 7.8e-07 56.6 61 44.3
Gorai.011G230300 Gossypium raimondii HOM05D002054 ORTHO05D005362 7.8e-07 56.6 61 44.3
Actinidia06702 Actinidia chinensis HOM05D002054 ORTHO05D005362 1.0e-06 56.2 56 50.0
Migut.F01813 Erythranthe guttata HOM05D002054 ORTHO05D005362 1.0e-06 56.2 61 45.9
Sabra08G0016300 Salix brachista HOM05D002054 ORTHO05D005362 1.3e-06 55.8 61 45.9
Duzib114G0207 Durio zibethinus HOM05D002054 ORTHO05D005362 1.7e-06 55.5 61 44.3
Thhalv10012741m.g Eutrema salsugineum HOM05D002054 ORTHO05D005362 1.7e-06 55.5 60 48.3
SGA_v2.0_scaffold71G24042 Striga asiatica HOM05D002054 ORTHO05D005362 2.3e-06 55.1 61 45.9
C02p02010 Brassica napus HOM05D002054 ORTHO05D005362 3.0e-06 54.7 59 47.5
BolC2t06158H Brassica oleracea HOM05D002054 ORTHO05D005362 3.0e-06 54.7 59 47.5
arahy.Tifrunner.gnm1.ann1.9TB0NK Arachis hypogaea HOM05D002054 ORTHO05D005362 3.9e-06 54.3 61 42.6
arahy.Tifrunner.gnm1.ann1.KWLN2P Arachis hypogaea HOM05D002054 ORTHO05D005362 3.9e-06 54.3 61 42.6
TAR633G2241 Trochodendron aralioides HOM05D002054 ORTHO05D005362 3.9e-06 54.3 50 52.0
Cpa.g.sc19.5 Carica papaya HOM05D002054 ORTHO05D005362 5.1e-06 53.9 61 50.8
Lsat_1_v5_gn_0_7461 Lactuca sativa HOM05D002054 ORTHO05D005362 5.1e-06 53.9 50 54.0
Hund06770 Selenicereus undatus HOM05D002054 ORTHO05D005362 5.1e-06 53.9 61 47.5
TWI63G1527 Tripterygium wilfordii HOM05D002054 ORTHO05D005362 5.1e-06 53.9 59 44.1
Sc20g0001250 Simmondsia chinensis HOM05D002054 ORTHO05D005362 6.6e-06 53.5 53 50.9
SGA_v2.0_scaffold122G33235 Striga asiatica HOM05D002054 ORTHO05D005362 6.6e-06 53.5 59 47.5
MSTRG.8169 Avicennia marina HOM05D002054 ORTHO05D005362 8.6e-06 53.1 61 50.8


User provided reference genes

Program Settings