Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0002F.1_g003310 Hydrangea macrophylla HOM05D000093 ORTHO05D007866 6.1e-44 180.3 81 100.0
Dinv38660 Davidia involucrata HOM05D000093 ORTHO05D007866 2.2e-25 118.6 81 70.4
Hma1.2p1_0104F.1_g050250 Hydrangea macrophylla HOM05D000093 ORTHO05D007866 2.2e-25 118.6 84 71.4
Hma1.2p1_0104F.1_g050270 Hydrangea macrophylla HOM05D000093 ORTHO05D007866 8.3e-25 116.7 84 70.2
Atru.chr9.2331 Acer truncatum HOM05D000093 ORTHO05D007866 9.2e-24 113.2 74 68.9
Dinv38661 Davidia involucrata HOM05D000093 ORTHO05D007866 2.0e-23 112.1 81 67.9
Potri.012G071200 Populus trichocarpa HOM05D000093 ORTHO05D007866 8.6e-22 106.7 82 65.9
Lj9C459T0 Lonicera japonica HOM05D000093 ORTHO05D007866 1.9e-21 105.5 77 62.3
COL.COLO4_37579 Corchorus olitorius HOM05D000093 ORTHO05D007866 2.5e-21 105.1 89 61.8
Cfa018998 Carpinus fangiana HOM05D000093 ORTHO05D007866 3.3e-21 104.8 85 63.5
Migut.I00124 Erythranthe guttata HOM05D000093 ORTHO05D007866 5.6e-21 104.0 82 61.0
Lsat_1_v5_gn_4_107461 Lactuca sativa HOM05D000093 ORTHO05D007866 5.6e-21 104.0 78 65.4
Cc04_g15690 Coffea canephora HOM05D000093 ORTHO05D007866 7.3e-21 103.6 84 60.7
Eucgr.K02924 Eucalyptus grandis HOM05D000093 ORTHO05D007866 9.5e-21 103.2 81 61.7
Lsat_1_v5_gn_4_107300 Lactuca sativa HOM05D000093 ORTHO05D007866 1.2e-20 102.8 78 61.5
Haze_07387 Corylus avellana HOM05D000093 ORTHO05D007866 2.1e-20 102.1 85 61.2
HanXRQChr09g0271111 Helianthus annuus HOM05D000093 ORTHO05D007866 4.7e-20 100.9 78 64.1
Cpa.g.sc6.156 Carica papaya HOM05D000093 ORTHO05D007866 6.2e-20 100.5 83 57.8
Eucgr.K02919 Eucalyptus grandis HOM05D000093 ORTHO05D007866 6.2e-20 100.5 72 62.5
Lsat_1_v5_gn_4_107541 Lactuca sativa HOM05D000093 ORTHO05D007866 6.2e-20 100.5 81 61.7
Potri.012G071300 Populus trichocarpa HOM05D000093 ORTHO05D007866 6.2e-20 100.5 83 62.7
Lju50C27T3 Lonicera japonica HOM05D000093 ORTHO05D007866 8.0e-20 100.1 77 59.7
Medtr0045s0060 Medicago truncatula HOM05D000093 ORTHO05D007866 8.0e-20 100.1 74 56.8
Prupe.5G185400 Prunus persica HOM05D000093 ORTHO05D007866 1.1e-19 99.8 74 63.5
ECA232G3559 Erigeron canadensis HOM05D000093 ORTHO05D007866 1.4e-19 99.4 77 62.3
Lsat_1_v5_gn_4_110101 Lactuca sativa HOM05D000093 ORTHO05D007866 1.4e-19 99.4 74 64.9
FAN08G3165 Fragaria x ananassa HOM05D000093 ORTHO05D007866 2.3e-19 98.6 85 60.0
TWI36G1536 Tripterygium wilfordii HOM05D000093 ORTHO05D007866 8.9e-19 96.7 80 56.2
Oeu022635.1 Olea europaea HOM05D000093 ORTHO05D007866 1.2e-18 96.3 76 57.9
Psat5g209880 Pisum sativum HOM05D000093 ORTHO05D007866 1.2e-18 96.3 74 55.4
TPR.G27850 Trifolium pratense HOM05D000093 ORTHO05D007866 1.2e-18 96.3 74 55.4
Cc06_g20340 Coffea canephora HOM05D000093 ORTHO05D007866 1.5e-18 95.9 78 57.7
FvH4_5g15600 Fragaria vesca HOM05D000093 ORTHO05D007866 1.5e-18 95.9 83 59.0
FvH4_5g15650 Fragaria vesca HOM05D000093 ORTHO05D007866 1.5e-18 95.9 83 59.0
FAN08G1266 Fragaria x ananassa HOM05D000093 ORTHO05D007866 1.5e-18 95.9 83 59.0
FAN13G0609 Fragaria x ananassa HOM05D000093 ORTHO05D007866 1.5e-18 95.9 77 62.3
Aqoxy3G00777 Aquilegia oxysepala HOM05D000093 ORTHO05D007866 2.0e-18 95.5 72 59.7
MD06G1187100 Malus domestica HOM05D000093 ORTHO05D007866 2.6e-18 95.1 73 61.6
SalBow1G1171 Salvia bowleyana HOM05D000093 ORTHO05D007866 2.6e-18 95.1 68 64.7
Aqoxy3G00787 Aquilegia oxysepala HOM05D000093 ORTHO05D007866 3.4e-18 94.7 82 57.3
SalBow5G5741 Salvia bowleyana HOM05D000093 ORTHO05D007866 3.4e-18 94.7 68 64.7
Aqoxy3G00788 Aquilegia oxysepala HOM05D000093 ORTHO05D007866 4.4e-18 94.4 82 54.9
Lsat_1_v5_gn_4_107280 Lactuca sativa HOM05D000093 ORTHO05D007866 4.4e-18 94.4 78 57.7
MD14G1193400 Malus domestica HOM05D000093 ORTHO05D007866 4.4e-18 94.4 73 60.3
TWI36G0615 Tripterygium wilfordii HOM05D000093 ORTHO05D007866 4.4e-18 94.4 80 56.2
Medtr0045s0080 Medicago truncatula HOM05D000093 ORTHO05D007866 9.8e-18 93.2 74 55.4
Cpa.g.sc17.196 Carica papaya HOM05D000093 ORTHO05D007866 1.3e-17 92.8 83 56.6
Cpa.g.sc17.197 Carica papaya HOM05D000093 ORTHO05D007866 1.3e-17 92.8 78 53.8
Cpa.g.sc6.157 Carica papaya HOM05D000093 ORTHO05D007866 2.2e-17 92.0 72 58.3
TAR622G0235 Trochodendron aralioides HOM05D000093 ORTHO05D007866 2.2e-17 92.0 82 52.4
RcHm_v2.0_Chr7g0180481 Rosa chinensis HOM05D000093 ORTHO05D007866 6.4e-17 90.5 83 54.2
FvH4_5g15590 Fragaria vesca HOM05D000093 ORTHO05D007866 1.9e-16 89.0 83 54.2
FAN18G2510 Fragaria x ananassa HOM05D000093 ORTHO05D007866 1.9e-16 89.0 83 54.2
TWI36G1277 Tripterygium wilfordii HOM05D000093 ORTHO05D007866 3.2e-16 88.2 76 56.6
Medtr0045s0070 Medicago truncatula HOM05D000093 ORTHO05D007866 4.1e-16 87.8 74 52.7
Lj3g0023461 Lotus japonicus HOM05D000093 ORTHO05D007866 5.4e-16 87.4 67 59.7
FAN04G1030 Fragaria x ananassa HOM05D000093 ORTHO05D007866 9.2e-16 86.7 77 58.4
Cc00_g28420 Coffea canephora HOM05D000093 ORTHO05D007866 1.2e-15 86.3 83 49.4
PSO063G1551 Papaver somniferum HOM05D000093 ORTHO05D007866 1.2e-15 86.3 74 54.1
Cc01_g02620 Coffea canephora HOM05D000093 ORTHO05D007866 1.6e-15 85.9 82 48.8
Lsat_1_v5_gn_4_107501 Lactuca sativa HOM05D000093 ORTHO05D007866 1.6e-15 85.9 82 54.9
Cpa.g.sc17.198 Carica papaya HOM05D000093 ORTHO05D007866 4.6e-15 84.3 78 51.3
DCAR_026080 Daucus carota HOM05D000093 ORTHO05D007866 1.0e-14 83.2 90 50.0
ATR0665G369 Amborella trichopoda HOM05D000093 ORTHO05D007866 2.3e-14 82.0 75 49.3
Ah.04g154720 Amaranthus hybridus HOM05D000093 ORTHO05D007866 1.5e-13 79.3 83 45.8
ATR0665G138 Amborella trichopoda HOM05D000093 ORTHO05D007866 1.9e-13 79.0 71 47.9
FvH4_5g15580 Fragaria vesca HOM05D000093 ORTHO05D007866 4.3e-13 77.8 40 82.5
Ah.04g154730 Amaranthus hybridus HOM05D000093 ORTHO05D007866 3.6e-12 74.7 87 42.5
MBI01_g01244_MAGBIO Magnolia biondii HOM05D000093 ORTHO05D007866 3.6e-12 74.7 40 72.5
Ah.04g154710 Amaranthus hybridus HOM05D000093 ORTHO05D007866 4.7e-12 74.3 84 44.0
Ah.04g154750 Amaranthus hybridus HOM05D000660 ORTHO05D003823 4.7e-12 74.3 87 43.7
Ah.13g072030 Amaranthus hybridus HOM05D000093 ORTHO05D007866 4.7e-12 74.3 83 44.6
AUR62019994 Chenopodium quinoa HOM05D000093 ORTHO05D007866 6.2e-12 73.9 65 47.7
EL10Ac5g12328 Beta vulgaris HOM05D000093 ORTHO05D007866 5.2e-11 70.9 68 47.1
EL10Ac5g12325 Beta vulgaris HOM05D000093 ORTHO05D007866 6.8e-11 70.5 65 49.2
AUR62007125 Chenopodium quinoa HOM05D000093 ORTHO05D007866 8.9e-11 70.1 65 46.2
Eucgr.L03454 Eucalyptus grandis HOM05D000093 ORTHO05D007866 8.9e-11 70.1 61 57.4
Ah.10g031340 Amaranthus hybridus HOM05D000093 ORTHO05D007866 2.0e-10 68.9 83 42.2
SEGI_04242 Sequoiadendron giganteum HOM05D000093 ORTHO05D007866 2.6e-10 68.6 72 47.2
SEGI_25967 Sequoiadendron giganteum HOM05D000093 ORTHO05D007866 5.8e-10 67.4 81 45.7
SEGI_14838 Sequoiadendron giganteum HOM05D000093 ORTHO05D007866 9.9e-10 66.6 77 45.5
SEGI_29778 Sequoiadendron giganteum HOM05D000093 ORTHO05D007866 1.3e-09 66.2 77 45.5
Ah.04g154740 Amaranthus hybridus HOM05D000093 ORTHO05D007866 8.3e-09 63.5 83 38.6
SEGI_01012 Sequoiadendron giganteum HOM05D000093 ORTHO05D007866 8.3e-09 63.5 80 45.0
Zm00001eb012940 Zea mays HOM05D000093 ORTHO05D007866 1.4e-08 62.8 82 45.1
SEGI_02238 Sequoiadendron giganteum HOM05D000093 ORTHO05D007866 1.9e-08 62.4 77 45.5
Os10g0378000 Oryza sativa ssp. japonica HOM05D000093 ORTHO05D007866 2.4e-08 62.0 78 46.2
Os10g0378100 Oryza sativa ssp. japonica HOM05D000093 ORTHO05D007866 2.4e-08 62.0 82 43.9
SEGI_32514 Sequoiadendron giganteum HOM05D000093 ORTHO05D007866 3.2e-08 61.6 77 42.9
ATR0568G226 Amborella trichopoda HOM05D000093 ORTHO05D007866 5.4e-08 60.8 73 47.9
MBI16_g08798_MAGBIO Magnolia biondii HOM05D000093 ORTHO05D007866 9.2e-08 60.1 57 49.1
Aqoxy3G00810 Aquilegia oxysepala HOM05D000093 ORTHO05D007866 6.0e-07 57.4 29 79.3


User provided reference genes

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