Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_27757 Corylus avellana HOM05D005515 ORTHO05D006620 1.5e-43 179.1 92 100.0
Duzib268G1731 Durio zibethinus HOM05D005515 ORTHO05D006620 2.6e-14 82.0 70 52.9
Psat3g175680 Pisum sativum HOM05D005515 ORTHO05D006620 4.4e-14 81.3 64 54.7
Migut.K00729 Erythranthe guttata HOM05D005515 ORTHO05D006620 7.5e-14 80.5 72 45.8
TPR.G38294 Trifolium pratense HOM05D005515 ORTHO05D006620 9.8e-14 80.1 64 53.1
MD00G1139400 Malus domestica HOM05D005515 ORTHO05D006620 1.3e-13 79.7 80 48.8
RcHm_v2.0_Chr2g0175521 Rosa chinensis HOM05D005515 ORTHO05D006620 1.3e-13 79.7 63 52.4
Actinidia05921 Actinidia chinensis HOM05D005515 ORTHO05D006620 2.2e-13 79.0 68 48.5
Zm00001eb364510 Zea mays HOM05D005515 ORTHO05D006620 2.2e-13 79.0 68 51.5
CSS0037273 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 2.8e-13 78.6 63 50.8
CiPaw.04G036400 Carya illinoinensis HOM05D005515 ORTHO05D006620 2.8e-13 78.6 64 50.0
CSS0007323 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 3.7e-13 78.2 64 50.0
Medtr7g033490 Medicago truncatula HOM05D005515 ORTHO05D006620 6.3e-13 77.4 64 50.0
QL02p071462 Quercus lobata HOM05D005515 ORTHO05D006620 6.3e-13 77.4 63 49.2
Zm00001eb143260 Zea mays HOM05D005515 ORTHO05D006620 6.3e-13 77.4 65 50.8
Pp3c8_2660 Physcomitrium patens HOM05D005515 ORTHO05D006620 1.1e-12 76.6 64 51.6
AUR62017824 Chenopodium quinoa HOM05D005515 ORTHO05D006620 1.4e-12 76.3 68 47.1
vmacro05955 Vaccinium macrocarpon HOM05D005515 ORTHO05D006620 1.4e-12 76.3 63 50.8
EL10Ac6g15358 Beta vulgaris HOM05D005515 ORTHO05D006620 2.4e-12 75.5 68 48.5
AagrBONN_evm.TU.Sc2ySwM_117.47 Anthoceros agrestis HOM05D005515 ORTHO05D006620 5.4e-12 74.3 79 45.6
Sopen02g017220 Solanum pennellii HOM05D005515 ORTHO05D006620 7.0e-12 73.9 63 46.0
Sed0013471 Sechium edule HOM05D005515 ORTHO05D006620 1.2e-11 73.2 67 47.8
Gohir.A05G310700 Gossypium hirsutum HOM05D005515 ORTHO05D006620 3.5e-11 71.6 64 46.9
Gorai.009G332600 Gossypium raimondii HOM05D005515 ORTHO05D006620 4.5e-11 71.2 64 48.4
C09p03480 Brassica napus HOM05D005515 ORTHO05D006620 5.9e-11 70.9 66 45.5
Ah.02g120510 Amaranthus hybridus HOM05D005515 ORTHO05D006620 1.3e-10 69.7 63 42.9
Cre08.g370300 Chlamydomonas reinhardtii HOM05D005515 ORTHO05D006620 1.1e-09 66.6 71 45.1
Haze_14873 Corylus avellana HOM05D005515 ORTHO05D006620 1.1e-09 66.6 64 43.8
PRCOL_00000741 Prasinoderma coloniale HOM05D005515 ORTHO05D006620 5.6e-09 64.3 60 41.7
COL.COLO4_20393 Corchorus olitorius HOM05D005515 ORTHO05D006620 6.1e-08 60.8 48 52.1
MD09G1011100 Malus domestica HOM05D005515 ORTHO05D006620 6.1e-08 60.8 64 45.3
Actinidia30652 Actinidia chinensis HOM05D005515 ORTHO05D006620 8.0e-08 60.5 48 52.1
TWI18G0205 Tripterygium wilfordii HOM05D005515 ORTHO05D006620 1.4e-07 59.7 72 38.9
Dinv25661 Davidia involucrata HOM05D005515 ORTHO05D006620 3.0e-07 58.5 64 40.6
MELO3C011459.2 Cucumis melo HOM05D005515 ORTHO05D006620 4.0e-07 58.2 67 41.8
SalBow2G3427 Salvia bowleyana HOM05D005515 ORTHO05D006620 4.0e-07 58.2 63 44.4
VMungo1383G1573 Vigna mungo HOM05D005515 ORTHO05D006620 8.9e-07 57.0 112 28.6
Lalb_Chr22g0360381 Lupinus albus HOM05D005515 ORTHO05D006620 1.2e-06 56.6 86 38.4
Phvul.001G093800 Phaseolus vulgaris HOM05D005515 ORTHO05D006620 1.5e-06 56.2 89 33.7
CANSAT11G1216 Cannabis sativa HOM05D005515 ORTHO05D006620 2.0e-06 55.8 88 36.4
FvH4_6g53480 Fragaria vesca HOM05D005515 ORTHO05D006620 2.0e-06 55.8 64 39.1
Lj1g0017105 Lotus japonicus HOM05D005515 ORTHO05D006620 2.0e-06 55.8 88 34.1
Glyma.19G091000 Glycine max HOM05D005515 ORTHO05D006620 2.6e-06 55.5 88 34.1
Potri.017G069200 Populus trichocarpa HOM05D005515 ORTHO05D006620 2.6e-06 55.5 89 33.7
Oeu006531.1 Olea europaea HOM05D005515 ORTHO05D006620 3.4e-06 55.1 50 46.0
Glyma.16G056700 Glycine max HOM05D005515 ORTHO05D006620 4.4e-06 54.7 86 34.9
Gohir.D05G311500 Gossypium hirsutum HOM05D005515 ORTHO05D006620 4.4e-06 54.7 48 45.8
Potri.001G330400 Populus trichocarpa HOM05D005515 ORTHO05D006620 7.5e-06 53.9 67 37.3
Eucgr.I01648 Eucalyptus grandis HOM05D005515 ORTHO05D006620 9.8e-06 53.5 90 32.2


User provided reference genes

Program Settings