Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_27732 Corylus avellana HOM05D000097 ORTHO05D000041 1.0e-54 216.5 107 100.0
Cfa001121 Carpinus fangiana HOM05D000097 ORTHO05D000041 1.3e-22 109.8 127 51.2
Cfa001118 Carpinus fangiana HOM05D000097 ORTHO05D000041 2.1e-20 102.4 151 46.4
Cfa000845 Carpinus fangiana HOM05D000097 ORTHO05D000041 3.7e-20 101.7 126 48.4
Haze_05305 Corylus avellana HOM05D000097 ORTHO05D000041 5.3e-19 97.8 127 46.5
Cfa000928 Carpinus fangiana HOM05D000097 ORTHO05D000041 3.9e-14 81.6 124 42.7
QL11p015452 Quercus lobata HOM05D000097 ORTHO05D000041 6.7e-14 80.9 124 42.7
QL11p015610 Quercus lobata HOM05D000097 ORTHO05D000041 6.7e-14 80.9 124 42.7
CiPaw.16G024100 Carya illinoinensis HOM05D000097 ORTHO05D000041 2.5e-13 79.0 126 41.3
Haze_05300 Corylus avellana HOM05D000097 ORTHO05D000041 3.3e-13 78.6 83 54.2
QL11p015794 Quercus lobata HOM05D000097 ORTHO05D000041 2.1e-12 75.9 124 38.7
Cfa012855 Carpinus fangiana HOM05D000097 ORTHO05D000041 2.4e-11 72.4 125 40.8
CiPaw.10G105200 Carya illinoinensis HOM05D000097 ORTHO05D000041 5.3e-11 71.2 121 38.8
CiPaw.09G137300 Carya illinoinensis HOM05D000097 ORTHO05D000041 9.0e-11 70.5 106 40.6
Haze_05372 Corylus avellana HOM05D000097 ORTHO05D000041 9.0e-11 70.5 123 36.6
CiPaw.10G104000 Carya illinoinensis HOM05D000097 ORTHO05D000041 1.2e-10 70.1 121 38.8
QL11p014837 Quercus lobata HOM05D000097 ORTHO05D000041 1.2e-10 70.1 123 38.2
CiPaw.01G089900 Carya illinoinensis HOM05D000097 ORTHO05D000041 2.0e-10 69.3 126 37.3
QL11p014912 Quercus lobata HOM05D000097 ORTHO05D000041 3.4e-10 68.6 117 35.9
QL11p015433 Quercus lobata HOM05D000097 ORTHO05D000041 4.5e-10 68.2 124 37.9
GSVIVG01012107001 Vitis vinifera HOM05D000097 ORTHO05D001641 5.8e-10 67.8 124 36.3
Hund21370 Selenicereus undatus HOM05D000097 ORTHO05D000041 7.6e-10 67.4 124 37.1
CiPaw.16G023300 Carya illinoinensis HOM05D000097 ORTHO05D000041 1.0e-09 67.0 128 36.7
ClCG03G004390 Citrullus lanatus HOM05D000097 ORTHO05D000041 1.3e-09 66.6 120 36.7
QL11p015595 Quercus lobata HOM05D000097 ORTHO05D000041 1.3e-09 66.6 124 37.1
CiPaw.16G023400 Carya illinoinensis HOM05D000097 ORTHO05D000041 1.7e-09 66.2 123 36.6
ClCG03G003230 Citrullus lanatus HOM05D000097 ORTHO05D000041 1.7e-09 66.2 124 34.7
Sed0015043 Sechium edule HOM05D000097 ORTHO05D000041 1.7e-09 66.2 124 35.5
AUR62036274 Chenopodium quinoa HOM05D000097 ORTHO05D000041 2.2e-09 65.9 128 35.2
Cc09_g05960 Coffea canephora HOM05D000097 ORTHO05D000041 2.9e-09 65.5 120 37.5
Carub.0007s2129 Capsella rubella HOM05D000097 ORTHO05D000041 3.8e-09 65.1 124 37.9
MELO3C002416.2 Cucumis melo HOM05D000097 ORTHO05D000041 4.9e-09 64.7 124 35.5
Eucgr.E04258 Eucalyptus grandis HOM05D000097 ORTHO05D000041 4.9e-09 64.7 124 34.7
CsaV3_1G010430 Cucumis sativus L. HOM05D000097 ORTHO05D000041 8.4e-09 63.9 122 33.6
Dinv09055 Davidia involucrata HOM05D000097 ORTHO05D000041 8.4e-09 63.9 124 36.3
CSS0045553 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D000041 1.1e-08 63.5 124 37.1
Cfa001123 Carpinus fangiana HOM05D000097 ORTHO05D000041 1.1e-08 63.5 121 36.4
Potri.015G125000 Populus trichocarpa HOM05D000097 ORTHO05D000041 1.1e-08 63.5 124 35.5
Rhsim13G0155000 Rhododendron simsii HOM05D000097 ORTHO05D000041 1.1e-08 63.5 120 37.5
ClCG03G004290 Citrullus lanatus HOM05D000097 ORTHO05D000041 1.4e-08 63.2 125 35.2
CsaV3_1G010270 Cucumis sativus L. HOM05D000097 ORTHO05D000041 1.4e-08 63.2 123 35.8
CiPaw.16G023200 Carya illinoinensis HOM05D000097 ORTHO05D000041 1.9e-08 62.8 128 34.4
AUR62022007 Chenopodium quinoa HOM05D000097 ORTHO05D000041 1.9e-08 62.8 124 33.9
QL11p014322 Quercus lobata HOM05D000097 ORTHO05D000041 1.9e-08 62.8 124 33.1
Solyc02g068670.3 Solanum lycopersicum HOM05D000097 ORTHO05D000041 2.5e-08 62.4 120 35.8
PGSC0003DMG400010440 Solanum tuberosum HOM05D000097 ORTHO05D000041 2.5e-08 62.4 120 35.8
TAR627G0118 Trochodendron aralioides HOM05D000097 ORTHO05D000041 2.5e-08 62.4 124 34.7
AUR62012648 Chenopodium quinoa HOM05D000097 ORTHO05D000041 3.2e-08 62.0 124 33.9
MELO3C002418.2 Cucumis melo HOM05D000097 ORTHO05D000041 3.2e-08 62.0 121 33.9
Dinv15490 Davidia involucrata HOM05D000097 ORTHO05D000041 3.2e-08 62.0 120 38.3
TWI15G0584 Tripterygium wilfordii HOM05D000097 ORTHO05D000041 3.2e-08 62.0 124 37.1
Hma1.2p1_1005F.1_g246880 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 4.2e-08 61.6 120 35.8
ClCG03G004310 Citrullus lanatus HOM05D000097 ORTHO05D000041 5.5e-08 61.2 124 35.5
Haze_05348 Corylus avellana HOM05D000097 ORTHO05D000041 5.5e-08 61.2 121 34.7
Ciclev10014428m.g Citrus clementina HOM05D000097 ORTHO05D000041 7.1e-08 60.8 125 36.0
Eucgr.E04256 Eucalyptus grandis HOM05D000097 ORTHO05D000041 7.1e-08 60.8 120 35.0
Hma1.2p1_0552F.1_g177730 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 7.1e-08 60.8 124 36.3
MELO3C002414.2 Cucumis melo HOM05D000097 ORTHO05D000041 9.3e-08 60.5 120 34.2
Atru.chr10.829 Acer truncatum HOM05D000097 ORTHO05D000041 1.2e-07 60.1 124 34.7
Sabra15G0139400 Salix brachista HOM05D000097 ORTHO05D000041 1.2e-07 60.1 124 34.7
Ah.14g088140 Amaranthus hybridus HOM05D000097 ORTHO05D000041 1.6e-07 59.7 124 35.5
Hma1.2p1_0498F.1_g166590 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 1.6e-07 59.7 120 36.7
Hma1.2p1_0498F.1_g166570 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 2.1e-07 59.3 125 34.4
GSVIVG01010204001 Vitis vinifera HOM05D000097 ORTHO05D000041 2.1e-07 59.3 124 35.5
Actinidia22414 Actinidia chinensis HOM05D000097 ORTHO05D000041 2.7e-07 58.9 120 36.7
Haze_05335 Corylus avellana HOM05D000097 ORTHO05D000041 2.7e-07 58.9 84 44.0
Haze_05339 Corylus avellana HOM05D000097 ORTHO05D000041 2.7e-07 58.9 84 44.0
CsaV3_1G010260 Cucumis sativus L. HOM05D000097 ORTHO05D000041 2.7e-07 58.9 120 34.2
DCAR_011885 Daucus carota HOM05D000097 ORTHO05D000041 2.7e-07 58.9 128 32.8
Dinv15491 Davidia involucrata HOM05D000097 ORTHO05D000041 2.7e-07 58.9 120 35.8
ClCG03G004300 Citrullus lanatus HOM05D000097 ORTHO05D000041 4.6e-07 58.2 120 32.5
CsaV3_5G005950 Cucumis sativus L. HOM05D000097 ORTHO05D000041 4.6e-07 58.2 120 32.5
Peaxi162Scf00149g00022 Petunia axillaris HOM05D000097 ORTHO05D000041 4.6e-07 58.2 124 33.1
Sed0004731 Sechium edule HOM05D000097 ORTHO05D000041 4.6e-07 58.2 120 30.8
Sed0016896 Sechium edule HOM05D000097 ORTHO05D000041 4.6e-07 58.2 125 33.6
Ciclev10018102m.g Citrus clementina HOM05D000097 ORTHO05D000041 6.0e-07 57.8 93 39.8
Dinv07264 Davidia involucrata HOM05D000097 ORTHO05D000041 6.0e-07 57.8 120 34.2
Sed0007525 Sechium edule HOM05D000097 ORTHO05D000041 6.0e-07 57.8 124 33.1
TAR627G0380 Trochodendron aralioides HOM05D000097 ORTHO05D000041 6.0e-07 57.8 124 36.3
Cpa.g.sc30.149 Carica papaya HOM05D000097 ORTHO05D000041 7.9e-07 57.4 124 33.1
Haze_05303 Corylus avellana HOM05D000097 ORTHO05D000041 7.9e-07 57.4 73 46.6
Atru.chr10.87 Acer truncatum HOM05D000097 ORTHO05D000041 1.3e-06 56.6 124 33.1
FvH4_4g07110 Fragaria vesca HOM05D000097 ORTHO05D000041 1.3e-06 56.6 124 36.3
FAN07G0456 Fragaria x ananassa HOM05D000097 ORTHO05D000041 1.3e-06 56.6 124 36.3
BcaC04g21811 Brassica carinata HOM05D000097 ORTHO05D000041 1.8e-06 56.2 124 32.3
C09p27240 Brassica napus HOM05D000097 ORTHO05D000041 1.8e-06 56.2 124 32.3
BraA09t37742Z Brassica rapa HOM05D000097 ORTHO05D000041 1.8e-06 56.2 124 32.3
Actinidia22409 Actinidia chinensis HOM05D000097 ORTHO05D000041 2.3e-06 55.8 120 30.8
CsaV3_1G010280 Cucumis sativus L. HOM05D000097 ORTHO05D000041 2.3e-06 55.8 121 31.4
Lsat_1_v5_gn_1_45280 Lactuca sativa HOM05D000097 ORTHO05D000041 2.3e-06 55.8 118 33.1
EL10Ac8g19891 Beta vulgaris HOM05D000097 ORTHO05D000041 3.0e-06 55.5 120 35.0
Haze_05330 Corylus avellana HOM05D000097 ORTHO05D000041 3.0e-06 55.5 40 70.0
FAN19G2679 Fragaria x ananassa HOM05D000097 ORTHO05D000041 3.0e-06 55.5 125 35.2
Haze_01473 Corylus avellana HOM05D000097 ORTHO05D000041 3.9e-06 55.1 71 43.7
Haze_12678 Corylus avellana HOM05D000097 ORTHO05D000041 3.9e-06 55.1 74 47.3
FvH4_1g20460 Fragaria vesca HOM05D000097 ORTHO05D000041 3.9e-06 55.1 125 35.2
Oeu052663.1 Olea europaea HOM05D000097 ORTHO05D000041 3.9e-06 55.1 122 29.5
PGSC0003DMG400010443 Solanum tuberosum HOM05D000097 ORTHO05D000041 3.9e-06 55.1 118 35.6
Actinidia22412 Actinidia chinensis HOM05D000097 ORTHO05D000041 5.1e-06 54.7 120 31.7
Glyma.09G054900 Glycine max HOM05D000097 ORTHO05D000041 5.1e-06 54.7 120 31.7
HanXRQChr07g0194311 Helianthus annuus HOM05D000097 ORTHO05D000041 5.1e-06 54.7 125 32.8
Hma1.2p1_0683F.1_g202960 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 5.1e-06 54.7 120 30.8
Sed0018410 Sechium edule HOM05D000097 ORTHO05D000041 5.1e-06 54.7 124 31.5
Atru.chr10.64 Acer truncatum HOM05D000097 ORTHO05D000041 6.7e-06 54.3 124 33.1
EL10Ac8g19991 Beta vulgaris HOM05D000097 ORTHO05D000041 6.7e-06 54.3 124 30.6
DCAR_011886 Daucus carota HOM05D000097 ORTHO05D000041 6.7e-06 54.3 128 32.8
RcHm_v2.0_Chr5g0059341 Rosa chinensis HOM05D000097 ORTHO05D000041 6.7e-06 54.3 124 33.9
A09p21410 Brassica napus HOM05D000097 ORTHO05D000041 8.7e-06 53.9 124 31.5
CSS0044034 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D000041 8.7e-06 53.9 120 32.5
Cpa.g.sc30.153 Carica papaya HOM05D000097 ORTHO05D000041 8.7e-06 53.9 124 33.9
AUR62012645 Chenopodium quinoa HOM05D000097 ORTHO05D000041 8.7e-06 53.9 124 33.9
MELO3C002412.2 Cucumis melo HOM05D000097 ORTHO05D000041 8.7e-06 53.9 120 30.8
MELO3C005362.2 Cucumis melo HOM05D000097 ORTHO05D000041 8.7e-06 53.9 120 30.8


User provided reference genes

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