Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_27542 Corylus avellana HOM05D000071 ORTHO05D029162 2.1e-46 189.9 219 100.0
Cfa013737 Carpinus fangiana HOM05D000071 ORTHO05D000029 7.2e-23 111.7 223 84.3
Haze_22390 Corylus avellana HOM05D000071 ORTHO05D000029 2.7e-22 109.8 235 80.0
Haze_03650 Corylus avellana HOM05D000071 ORTHO05D007983 9.1e-18 94.7 51 88.2
Cfa016298 Carpinus fangiana HOM05D000071 ORTHO05D000029 5.9e-17 92.0 204 86.8
Haze_00066 Corylus avellana HOM05D000071 ORTHO05D000029 8.5e-16 88.2 53 79.2
Haze_00056 Corylus avellana HOM05D002465 ORTHO05D008860 4.7e-14 82.4 53 75.5
Cfa016308 Carpinus fangiana HOM05D000071 ORTHO05D000029 1.4e-13 80.9 53 75.5
Cfa016313 Carpinus fangiana HOM05D000071 ORTHO05D000029 1.8e-13 80.5 53 75.5
Cfa019774 Carpinus fangiana HOM05D000071 ORTHO05D000029 1.8e-13 80.5 53 75.5
CiPaw.05G258800 Carya illinoinensis HOM05D000071 ORTHO05D000029 3.7e-11 72.8 220 41.4
Cfa016312 Carpinus fangiana HOM05D000071 ORTHO05D000029 1.2e-09 67.8 50 72.0
CiPaw.05G260900 Carya illinoinensis HOM05D000071 ORTHO05D000029 1.6e-09 67.4 54 66.7
CiPaw.05G261000 Carya illinoinensis HOM05D000071 ORTHO05D000029 4.5e-09 65.9 55 58.2
QL93p0310_0045 Quercus lobata HOM05D000071 ORTHO05D000029 1.7e-08 63.9 49 63.3
GSVIVG01000881001 Vitis vinifera HOM05D000071 ORTHO05D000029 2.3e-08 63.5 51 58.8
GSVIVG01028815001 Vitis vinifera HOM05D000071 ORTHO05D029162 2.3e-08 63.5 49 61.2
QL04p093573 Quercus lobata HOM05D000071 ORTHO05D000029 2.9e-08 63.2 49 63.3
GSVIVG01000878001 Vitis vinifera HOM05D000071 ORTHO05D000029 8.6e-08 61.6 49 61.2
Rhsim10G0009400 Rhododendron simsii HOM05D000071 ORTHO05D000029 3.3e-07 59.7 52 55.8
QL93p0310_0029 Quercus lobata HOM05D000071 ORTHO05D000029 5.6e-07 58.9 49 59.2
FAN11G1490 Fragaria x ananassa HOM05D000071 ORTHO05D000029 7.3e-07 58.5 52 51.9
QL04p093548 Quercus lobata HOM05D000071 ORTHO05D000029 7.3e-07 58.5 50 60.0
Rhsim10G0009300 Rhododendron simsii HOM05D000071 ORTHO05D000029 7.3e-07 58.5 53 52.8
CSS0043994 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 1.2e-06 57.8 53 50.9
Ciclev10018317m.g Citrus clementina HOM05D000071 ORTHO05D000029 1.2e-06 57.8 47 59.6
MD01G1172100 Malus domestica HOM05D000071 ORTHO05D000029 1.2e-06 57.8 51 52.9
FAN25G2918 Fragaria x ananassa HOM05D000071 ORTHO05D000029 1.6e-06 57.4 40 62.5
QL05p008200 Quercus lobata HOM05D000071 ORTHO05D000029 1.6e-06 57.4 53 54.7
Nn3g18616 Nelumbo nucifera HOM05D000071 ORTHO05D000029 2.1e-06 57.0 52 50.0
Dinv08554 Davidia involucrata HOM05D000071 ORTHO05D000029 2.8e-06 56.6 54 53.7
FAN03G1688 Fragaria x ananassa HOM05D000071 ORTHO05D000029 2.8e-06 56.6 51 54.9
MBI18_g02452_MAGBIO Magnolia biondii HOM05D000071 ORTHO05D000029 2.8e-06 56.6 53 58.5
Nn7g36602 Nelumbo nucifera HOM05D000071 ORTHO05D000029 3.6e-06 56.2 54 53.7
Prupe.2G270000 Prunus persica HOM05D000071 ORTHO05D000029 3.6e-06 56.2 51 51.0
Dinv35215 Davidia involucrata HOM05D000071 ORTHO05D000029 4.7e-06 55.8 53 50.9
TAR636G1628 Trochodendron aralioides HOM05D000071 ORTHO05D000029 4.7e-06 55.8 51 54.9
TAR636G2807 Trochodendron aralioides HOM05D000071 ORTHO05D000029 4.7e-06 55.8 51 54.9
MBI19_g35953_MAGBIO Magnolia biondii HOM05D000071 ORTHO05D000029 6.1e-06 55.5 54 55.6
FvH4_7g26566 Fragaria vesca HOM05D000071 ORTHO05D000029 8.0e-06 55.1 51 54.9
Potri.003G196832 Populus trichocarpa HOM05D000071 ORTHO05D000029 8.0e-06 55.1 44 61.4
Rhsim02G0186100 Rhododendron simsii HOM05D000071 ORTHO05D000029 8.0e-06 55.1 53 52.8
RcHm_v2.0_Chr5g0022541 Rosa chinensis HOM05D000071 ORTHO05D000029 8.0e-06 55.1 55 52.7
RcHm_v2.0_Chr5g0022701 Rosa chinensis HOM05D000071 ORTHO05D000029 8.0e-06 55.1 55 52.7


User provided reference genes

Program Settings