Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_27540 Corylus avellana HOM05D003180 ORTHO05D003664 1.3e-117 426.4 219 100.0
PRCOL_00000972 Prasinoderma coloniale HOM05D001225 ORTHO05D001252 7.5e-12 75.1 116 40.5
CsaV3_2G017260 Cucumis sativus L. HOM05D003180 ORTHO05D003664 9.8e-12 74.7 95 45.3
MELO3C020929.2 Cucumis melo HOM05D003180 ORTHO05D003664 1.3e-11 74.3 107 42.1
PGSC0003DMG400000753 Solanum tuberosum HOM05D003180 ORTHO05D003664 3.7e-11 72.8 118 38.1
QL06p042406 Quercus lobata HOM05D003180 ORTHO05D003664 4.9e-11 72.4 112 39.3
Sed0026779 Sechium edule HOM05D003180 ORTHO05D003664 4.9e-11 72.4 110 40.0
Sopen02g015240 Solanum pennellii HOM05D003180 ORTHO05D003664 4.9e-11 72.4 118 38.1
AUR62003848 Chenopodium quinoa HOM05D003180 ORTHO05D003664 6.3e-11 72.0 115 40.0
ClCG02G013170 Citrullus lanatus HOM05D003180 ORTHO05D003664 6.3e-11 72.0 95 43.2
Lj7C59G1 Lonicera japonica HOM05D003180 ORTHO05D003664 6.3e-11 72.0 96 45.8
Potri.007G040700 Populus trichocarpa HOM05D003180 ORTHO05D003664 6.3e-11 72.0 113 40.7
Solyc02g065080.3 Solanum lycopersicum HOM05D003180 ORTHO05D003664 6.3e-11 72.0 118 38.1
AUR62001958 Chenopodium quinoa HOM05D003180 ORTHO05D003664 8.3e-11 71.6 114 40.4
Hund16314 Selenicereus undatus HOM05D003180 ORTHO05D003664 1.1e-10 71.2 111 42.3
Cfa003992 Carpinus fangiana HOM05D003180 ORTHO05D003664 1.8e-10 70.5 109 40.4
CiPaw.02G009800 Carya illinoinensis HOM05D003180 ORTHO05D003664 1.8e-10 70.5 108 39.8
Haze_15431 Corylus avellana HOM05D003180 ORTHO05D003664 1.8e-10 70.5 100 44.0
Lj7C58G0 Lonicera japonica HOM05D003180 ORTHO05D003664 1.8e-10 70.5 100 43.0
Lj7C61G5 Lonicera japonica HOM05D003180 ORTHO05D003664 1.8e-10 70.5 96 44.8
Nitab4.5_0004123g0010 Nicotiana tabacum HOM05D003180 ORTHO05D003664 1.8e-10 70.5 150 33.3
Peaxi162Scf00049g01317 Petunia axillaris HOM05D003180 ORTHO05D003664 1.8e-10 70.5 107 38.3
Cc07_g05810 Coffea canephora HOM05D003180 ORTHO05D003664 2.4e-10 70.1 103 39.8
Hund13571 Selenicereus undatus HOM05D003180 ORTHO05D003664 2.4e-10 70.1 110 38.2
Oeu004871.1 Olea europaea HOM05D003180 ORTHO05D003664 3.1e-10 69.7 105 41.9
Atru.chr13.623 Acer truncatum HOM05D003180 ORTHO05D003664 4.1e-10 69.3 104 44.2
Duzib264G0300 Durio zibethinus HOM05D003180 ORTHO05D003664 4.1e-10 69.3 91 48.4
SGA_v2.0_scaffold15G07257 Striga asiatica HOM05D003180 ORTHO05D003664 5.4e-10 68.9 95 44.2
BcaB05g23220 Brassica carinata HOM05D003180 ORTHO05D003664 7.0e-10 68.6 91 45.1
BcaC09g50033 Brassica carinata HOM05D003180 ORTHO05D003664 7.0e-10 68.6 91 45.1
Glyma.05G080500 Glycine max HOM05D003180 ORTHO05D003664 7.0e-10 68.6 110 40.9
Gorai.008G074200 Gossypium raimondii HOM05D003180 ORTHO05D003664 7.0e-10 68.6 92 46.7
Ah.02g124030 Amaranthus hybridus HOM05D000144 ORTHO05D003364 9.2e-10 68.2 97 42.3
BolC7t45099H Brassica oleracea HOM05D003180 ORTHO05D003664 9.2e-10 68.2 93 45.2
Dinv29962 Davidia involucrata HOM05D003180 ORTHO05D003664 1.2e-09 67.8 111 36.9
HanXRQChr15g0490001 Helianthus annuus HOM05D003180 ORTHO05D003664 1.2e-09 67.8 106 39.6
Oeu042248.1 Olea europaea HOM05D003180 ORTHO05D003664 1.2e-09 67.8 96 42.7
THA.LOC104821269 Tarenaya hassleriana HOM05D003180 ORTHO05D003664 1.2e-09 67.8 96 43.8
TPR.G19013 Trifolium pratense HOM05D003180 ORTHO05D003664 1.2e-09 67.8 110 38.2
CiPaw.01G022000 Carya illinoinensis HOM05D003180 ORTHO05D003664 1.6e-09 67.4 112 37.5
HanXRQChr15g0489981 Helianthus annuus HOM05D003180 ORTHO05D003664 1.6e-09 67.4 96 43.8
Medtr8g079780 Medicago truncatula HOM05D003180 ORTHO05D003664 1.6e-09 67.4 103 38.8
Os08g0476400 Oryza sativa ssp. japonica HOM05D003180 ORTHO05D003664 1.6e-09 67.4 122 35.2
TAR623G0596 Trochodendron aralioides HOM05D003180 ORTHO05D003664 1.6e-09 67.4 93 41.9
ECA232G4852 Erigeron canadensis HOM05D000369 ORTHO05D000253 2.0e-09 67.0 115 40.0
TAR625G0854 Trochodendron aralioides HOM05D000591 ORTHO05D003664 2.0e-09 67.0 108 38.0
AT3G50520 Arabidopsis thaliana HOM05D003180 ORTHO05D003664 2.7e-09 66.6 90 43.3
C01p29750 Brassica napus HOM05D003180 ORTHO05D003664 2.7e-09 66.6 91 44.0
BolC1t02916H Brassica oleracea HOM05D003180 ORTHO05D003664 2.7e-09 66.6 91 44.0
CARHR160020 Cardamine hirsuta HOM05D003180 ORTHO05D003664 2.7e-09 66.6 94 42.6
PSO384G2781 Papaver somniferum HOM05D003180 ORTHO05D003664 2.7e-09 66.6 106 35.8
Psat4g088040 Pisum sativum HOM05D003180 ORTHO05D003664 3.5e-09 66.2 137 36.5
Ah.03g144400 Amaranthus hybridus HOM05D003180 ORTHO05D003664 4.5e-09 65.9 94 43.6
AL5G30670 Arabidopsis lyrata HOM05D003180 ORTHO05D003664 4.5e-09 65.9 91 44.0
EL10Ac6g15147 Beta vulgaris HOM05D003180 ORTHO05D003664 4.5e-09 65.9 128 35.2
COL.COLO4_11375 Corchorus olitorius HOM05D003180 ORTHO05D003664 4.5e-09 65.9 93 44.1
Thhalv10010687m.g Eutrema salsugineum HOM05D003180 ORTHO05D003664 4.5e-09 65.9 91 44.0
MD15G1280500 Malus domestica HOM05D003180 ORTHO05D003664 4.5e-09 65.9 100 43.0
PSO339G2845 Papaver somniferum HOM05D003180 ORTHO05D003664 4.5e-09 65.9 106 35.8
PSO339G4170 Papaver somniferum HOM05D003180 ORTHO05D003664 4.5e-09 65.9 106 34.9
PSO384G1057 Papaver somniferum HOM05D003180 ORTHO05D003664 4.5e-09 65.9 106 35.8
CAN.G470.17 Capsicum annuum HOM05D003180 ORTHO05D003664 5.9e-09 65.5 184 32.6
Ca_22192_v3 Cicer arietinum L. HOM05D003180 ORTHO05D003664 5.9e-09 65.5 103 37.9
Duzib187G0486 Durio zibethinus HOM05D003180 ORTHO05D003664 5.9e-09 65.5 93 46.2
FvH4_1g15610 Fragaria vesca HOM05D003180 ORTHO05D003664 5.9e-09 65.5 104 39.4
FAN19G2046 Fragaria x ananassa HOM05D003180 ORTHO05D003664 5.9e-09 65.5 104 39.4
MD02G1168200 Malus domestica HOM05D003180 ORTHO05D003664 5.9e-09 65.5 106 37.7
PGR142G3760 Punica granatum HOM05D003180 ORTHO05D003664 5.9e-09 65.5 94 41.5
TWI73G1210 Tripterygium wilfordii HOM05D003180 ORTHO05D003664 5.9e-09 65.5 96 41.7
Thecc.01G051900 Theobroma cacao HOM05D003180 ORTHO05D003664 7.8e-09 65.1 91 46.2
A01p24080 Brassica napus HOM05D003180 ORTHO05D003664 1.0e-08 64.7 91 44.0
BraA01t02321Z Brassica rapa HOM05D003180 ORTHO05D003664 1.0e-08 64.7 91 44.0
Gohir.A11G189900 Gossypium hirsutum HOM05D003180 ORTHO05D003664 1.0e-08 64.7 91 45.1
Gohir.D11G196700 Gossypium hirsutum HOM05D003180 ORTHO05D003664 1.0e-08 64.7 91 45.1
PSO384G3113 Papaver somniferum HOM05D003180 ORTHO05D003664 1.0e-08 64.7 106 34.9
Pp3c8_13210 Physcomitrium patens HOM05D003180 ORTHO05D003664 1.0e-08 64.7 100 44.0
Sp5g11680 Schrenkiella parvula HOM05D003180 ORTHO05D003664 1.3e-08 64.3 107 39.3
Sc03g0001380 Simmondsia chinensis HOM05D003180 ORTHO05D003664 1.3e-08 64.3 110 38.2
TWI53G2069 Tripterygium wilfordii HOM05D003180 ORTHO05D003664 1.3e-08 64.3 110 38.2
Atru.chr3.404 Acer truncatum HOM05D003180 ORTHO05D003664 1.7e-08 63.9 108 38.9
Lj4g0007404 Lotus japonicus HOM05D003180 ORTHO05D003664 1.7e-08 63.9 107 41.1
RcHm_v2.0_Chr2g0104951 Rosa chinensis HOM05D003180 ORTHO05D003664 1.7e-08 63.9 107 37.4
Carub.0006s0307 Capsella rubella HOM05D003180 ORTHO05D003664 2.3e-08 63.5 109 37.6
Duzib147G0433 Durio zibethinus HOM05D003180 ORTHO05D003664 2.3e-08 63.5 91 45.1
Migut.H00458 Erythranthe guttata HOM05D003180 ORTHO05D003664 2.3e-08 63.5 112 35.7
Eucgr.I00955 Eucalyptus grandis HOM05D003180 ORTHO05D003664 2.3e-08 63.5 132 34.8
Nn7g36805 Nelumbo nucifera HOM05D003180 ORTHO05D003664 2.3e-08 63.5 106 36.8
PSO339G0869 Papaver somniferum HOM05D003180 ORTHO05D003664 2.3e-08 63.5 106 34.0
PSO384G1806 Papaver somniferum HOM05D003180 ORTHO05D003664 2.3e-08 63.5 106 34.0
Prupe.7G136800 Prunus persica HOM05D003180 ORTHO05D003664 2.3e-08 63.5 95 43.2
SMO270G0094 Selaginella moellendorffii HOM05D003180 ORTHO05D003664 2.3e-08 63.5 108 37.0
vmacro17931 Vaccinium macrocarpon HOM05D003180 ORTHO05D003664 2.3e-08 63.5 111 39.6
Carub.0005s1685 Capsella rubella HOM05D003180 ORTHO05D003664 2.9e-08 63.2 91 44.0
Lalb_Chr16g0388381 Lupinus albus HOM05D003180 ORTHO05D003664 2.9e-08 63.2 104 40.4
Manes.13G125800 Manihot esculenta HOM05D003180 ORTHO05D003664 2.9e-08 63.2 92 43.5
PSO541G2909 Papaver somniferum HOM05D003180 ORTHO05D003664 2.9e-08 63.2 109 36.7
Pp3c24_9340 Physcomitrium patens HOM05D003180 ORTHO05D003664 2.9e-08 63.2 102 39.2
Aa31LG4G18700 Aethionema arabicum HOM05D003180 ORTHO05D003664 3.8e-08 62.8 91 42.9
BcaC06g32115 Brassica carinata HOM05D003180 ORTHO05D003664 3.8e-08 62.8 93 41.9
C09p72730 Brassica napus HOM05D003180 ORTHO05D003664 3.8e-08 62.8 93 41.9
BolC9t60012H Brassica oleracea HOM05D003180 ORTHO05D003664 3.8e-08 62.8 93 41.9
BraA10t45245Z Brassica rapa HOM05D003180 ORTHO05D003664 3.8e-08 62.8 93 41.9
PSO675G0370 Papaver somniferum HOM05D003180 ORTHO05D003664 3.8e-08 62.8 109 36.7
Zm00001eb038230 Zea mays HOM05D003180 ORTHO05D003664 3.8e-08 62.8 105 36.2
arahy.Tifrunner.gnm1.ann1.RZZ5RD Arachis hypogaea HOM05D003180 ORTHO05D003664 5.0e-08 62.4 96 42.7
arahy.Tifrunner.gnm1.ann1.UDMY6J Arachis hypogaea HOM05D003180 ORTHO05D003664 5.0e-08 62.4 96 42.7
AUR62027515 Chenopodium quinoa HOM05D003180 ORTHO05D003664 5.0e-08 62.4 93 44.1
THA.LOC104826890 Tarenaya hassleriana HOM05D003180 ORTHO05D003664 5.0e-08 62.4 93 40.9
TAR381G0032 Trochodendron aralioides HOM05D003180 ORTHO05D003664 5.0e-08 62.4 97 39.2
CANSAT01G0500 Cannabis sativa HOM05D003180 ORTHO05D003664 6.6e-08 62.0 100 43.0
Eucgr.I00964 Eucalyptus grandis HOM05D003180 ORTHO05D003664 6.6e-08 62.0 91 42.9
TWI53G0684 Tripterygium wilfordii HOM05D003180 ORTHO05D003664 6.6e-08 62.0 105 38.1
AL6G13740 Arabidopsis lyrata HOM05D003180 ORTHO05D003664 8.6e-08 61.6 93 40.9
Eucgr.I00962 Eucalyptus grandis HOM05D003180 ORTHO05D003664 8.6e-08 61.6 91 41.8
FAN23G2127 Fragaria x ananassa HOM05D003180 ORTHO05D003664 8.6e-08 61.6 131 36.6
TAR633G2013 Trochodendron aralioides HOM05D003180 ORTHO05D003664 8.6e-08 61.6 106 34.0
BcaB05g21773 Brassica carinata HOM05D003180 ORTHO05D003664 1.1e-07 61.2 93 41.9
BcaC03g16892 Brassica carinata HOM05D003180 ORTHO05D003664 1.1e-07 61.2 94 41.5
A10p32010 Brassica napus HOM05D003180 ORTHO05D003664 1.1e-07 61.2 93 41.9
C02p47890 Brassica napus HOM05D003180 ORTHO05D003664 1.1e-07 61.2 94 41.5
Ciclev10026175m.g Citrus clementina HOM05D003180 ORTHO05D003664 1.1e-07 61.2 95 42.1
Dinv39879 Davidia involucrata HOM05D003180 ORTHO05D003664 1.1e-07 61.2 96 40.6
A02p30370 Brassica napus HOM05D003180 ORTHO05D003664 1.5e-07 60.8 94 41.5
BraA02t08052Z Brassica rapa HOM05D003180 ORTHO05D003664 1.5e-07 60.8 94 41.5
Dinv35999 Davidia involucrata HOM05D003180 ORTHO05D003664 1.5e-07 60.8 104 37.5
Eucgr.I00961 Eucalyptus grandis HOM05D003180 ORTHO05D003664 1.5e-07 60.8 107 36.4
Mapoly0136s0032 Marchantia polymorpha HOM05D003180 ORTHO05D003664 1.5e-07 60.8 100 40.0
AT5G04120 Arabidopsis thaliana HOM05D003180 ORTHO05D003664 1.9e-07 60.5 93 40.9
Cre10.g460300 Chlamydomonas reinhardtii HOM05D003180 ORTHO05D003664 1.9e-07 60.5 98 40.8
Aqoxy6G01421 Aquilegia oxysepala HOM05D003180 ORTHO05D003664 2.5e-07 60.1 106 37.7
BcaB05g21786 Brassica carinata HOM05D003180 ORTHO05D003664 2.5e-07 60.1 93 41.9
BcaC03g12967 Brassica carinata HOM05D003180 ORTHO05D014840 2.5e-07 60.1 93 41.9
C02p01670 Brassica napus HOM05D003180 ORTHO05D003664 2.5e-07 60.1 93 41.9
BolC2t06132H Brassica oleracea HOM05D003180 ORTHO05D003664 2.5e-07 60.1 93 41.9
BraA02t04798Z Brassica rapa HOM05D003180 ORTHO05D003664 2.5e-07 60.1 93 41.9
MBI02_g21207_MAGBIO Magnolia biondii HOM05D003180 ORTHO05D003664 2.5e-07 60.1 103 36.9
MBI02_g44921_MAGBIO Magnolia biondii HOM05D003180 ORTHO05D003664 2.5e-07 60.1 103 36.9
MBI19_g22600_MAGBIO Magnolia biondii HOM05D003180 ORTHO05D003664 2.5e-07 60.1 106 33.0
Medtr8g079760 Medicago truncatula HOM05D003180 ORTHO05D003664 2.5e-07 60.1 108 36.1
Phvul.003G246100 Phaseolus vulgaris HOM05D003180 ORTHO05D003664 2.5e-07 60.1 111 33.3
TPR.G19019 Trifolium pratense HOM05D003180 ORTHO05D003664 2.5e-07 60.1 161 31.7
Aa31LG1G21210 Aethionema arabicum HOM05D003180 ORTHO05D003664 3.3e-07 59.7 93 39.8
Aa31LG1G21340 Aethionema arabicum HOM05D003180 ORTHO05D003664 3.3e-07 59.7 93 39.8
BcaB05g21776 Brassica carinata HOM05D003180 ORTHO05D003664 3.3e-07 59.7 93 40.9
Lsat_1_v5_gn_4_169080 Lactuca sativa HOM05D000369 ORTHO05D000253 3.3e-07 59.7 106 37.7
Lj4g0023396 Lotus japonicus HOM05D003180 ORTHO05D003664 3.3e-07 59.7 109 36.7
Psat4g088120 Pisum sativum HOM05D003180 ORTHO05D003664 3.3e-07 59.7 108 36.1
Eucgr.I00958 Eucalyptus grandis HOM05D003180 ORTHO05D003664 4.3e-07 59.3 131 35.1
MD15G1280300 Malus domestica HOM05D003180 ORTHO05D003664 4.3e-07 59.3 110 38.2
Os12g0135100 Oryza sativa ssp. japonica HOM05D003180 ORTHO05D003664 4.3e-07 59.3 103 38.8
Rhsim06G0046200 Rhododendron simsii HOM05D003180 ORTHO05D003664 4.3e-07 59.3 103 35.9
CSS0036818 Camellia sinensis var. sinensis HOM05D003180 ORTHO05D003664 5.6e-07 58.9 89 41.6
Eucgr.I00967 Eucalyptus grandis HOM05D003180 ORTHO05D003664 5.6e-07 58.9 91 42.9
Thhalv10015526m.g Eutrema salsugineum HOM05D003180 ORTHO05D003664 5.6e-07 58.9 93 41.9
Lalb_Chr05g0226691 Lupinus albus HOM05D003180 ORTHO05D003664 5.6e-07 58.9 91 42.9
MBI19_g42984_MAGBIO Magnolia biondii HOM05D003180 ORTHO05D003664 5.6e-07 58.9 106 33.0
Phvul.003G246200 Phaseolus vulgaris HOM05D003180 ORTHO05D003664 5.6e-07 58.9 105 40.0
ATR1133G056 Amborella trichopoda HOM05D003180 ORTHO05D003664 7.3e-07 58.5 95 38.9
Gorai.007G210600 Gossypium raimondii HOM05D003180 ORTHO05D003664 9.5e-07 58.2 101 40.6
MD15G1280400 Malus domestica HOM05D003180 ORTHO05D003664 9.5e-07 58.2 91 42.9
HPP92_010952 Vanilla planifolia HOM05D003180 ORTHO05D003664 9.5e-07 58.2 113 35.4
EL10Ac6g15148 Beta vulgaris HOM05D003180 ORTHO05D003664 1.2e-06 57.8 64 51.6
Aqoxy1G00385 Aquilegia oxysepala HOM05D003180 ORTHO05D003664 1.6e-06 57.4 106 34.0
Aqoxy1G00384 Aquilegia oxysepala HOM05D003180 ORTHO05D003664 2.1e-06 57.0 106 31.1
VMungo0251G3329 Vigna mungo HOM05D003180 ORTHO05D003664 2.1e-06 57.0 94 37.2
Zm00001eb196320 Zea mays HOM05D003180 ORTHO05D003664 2.8e-06 56.6 93 38.7
ATR0820G288 Amborella trichopoda HOM05D003185 ORTHO05D007711 3.6e-06 56.2 141 31.9
Ca_22193_v3 Cicer arietinum L. HOM05D003180 ORTHO05D003664 3.6e-06 56.2 95 38.9
Prupe.7G136900 Prunus persica HOM05D003180 ORTHO05D003664 3.6e-06 56.2 126 34.9
CDE10G0039 Ceratophyllum demersum HOM05D003180 ORTHO05D003664 4.7e-06 55.8 90 41.1
Ca_28868_v3 Cicer arietinum L. HOM05D003180 ORTHO05D003664 4.7e-06 55.8 109 34.9
unitig_736.g22659 Utricularia gibba HOM05D003180 ORTHO05D003664 4.7e-06 55.8 61 49.2
AUR62003849 Chenopodium quinoa HOM05D003180 ORTHO05D003664 6.1e-06 55.5 64 51.6
Gohir.A12G083066 Gossypium hirsutum HOM05D003180 ORTHO05D003664 6.1e-06 55.5 88 43.2
Os11g0138400 Oryza sativa ssp. japonica HOM05D003180 ORTHO05D003664 8.0e-06 55.1 94 39.4


User provided reference genes

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