Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_27525 Corylus avellana HOM05D005325 ORTHO05D008457 7.7e-109 397.1 195 100.0
CARHR122960 Cardamine hirsuta HOM05D005325 ORTHO05D008457 4.5e-24 115.5 185 39.5
AT2G29640 Arabidopsis thaliana HOM05D005325 ORTHO05D008457 4.9e-23 112.1 172 38.4
MD11G1079900 Malus domestica HOM05D005325 ORTHO05D008457 6.4e-23 111.7 174 36.8
Actinidia25148 Actinidia chinensis HOM05D005325 ORTHO05D008457 8.4e-23 111.3 190 35.8
Cc01_g13970 Coffea canephora HOM05D005325 ORTHO05D008457 1.1e-22 110.9 173 34.7
BcaC02g11048 Brassica carinata HOM05D005325 ORTHO05D008457 1.4e-22 110.5 172 38.4
Nn2g11401 Nelumbo nucifera HOM05D005325 ORTHO05D008457 1.9e-22 110.2 173 37.0
ECA248G3745 Erigeron canadensis HOM05D005325 ORTHO05D008457 2.4e-22 109.8 175 34.9
Sc12g0000890 Simmondsia chinensis HOM05D005325 ORTHO05D008457 3.2e-22 109.4 169 39.1
Sopen09g014710 Solanum pennellii HOM05D005325 ORTHO05D008457 4.2e-22 109.0 172 35.5
C04p21170 Brassica napus HOM05D005325 ORTHO05D008457 5.4e-22 108.6 170 38.2
Thhalv10017013m.g Eutrema salsugineum HOM05D005325 ORTHO05D008457 5.4e-22 108.6 171 38.0
vmacro02986 Vaccinium macrocarpon HOM05D005325 ORTHO05D008457 5.4e-22 108.6 189 34.4
AL4G24390 Arabidopsis lyrata HOM05D005325 ORTHO05D008457 7.1e-22 108.2 175 37.1
Carub.0004s1073 Capsella rubella HOM05D005325 ORTHO05D008457 7.1e-22 108.2 172 36.6
FvH4_3g38250 Fragaria vesca HOM05D005325 ORTHO05D008457 7.1e-22 108.2 173 37.0
Solyc09g031770.3 Solanum lycopersicum HOM05D005325 ORTHO05D008457 7.1e-22 108.2 172 34.9
A05p15750 Brassica napus HOM05D005325 ORTHO05D008457 9.3e-22 107.8 159 40.3
EL10Ac7g16130 Beta vulgaris HOM05D005325 ORTHO05D008457 1.2e-21 107.5 160 36.9
BraA05t20490Z Brassica rapa HOM05D005325 ORTHO05D008457 1.2e-21 107.5 159 40.3
Lsat_1_v5_gn_5_172281 Lactuca sativa HOM05D005325 ORTHO05D008457 1.2e-21 107.5 173 34.7
Zm00001eb011730 Zea mays HOM05D005325 ORTHO05D008457 1.2e-21 107.5 171 35.7
COL.COLO4_19112 Corchorus olitorius HOM05D005325 ORTHO05D008457 1.6e-21 107.1 171 36.8
Sp4g12350 Schrenkiella parvula HOM05D005325 ORTHO05D008457 1.6e-21 107.1 185 36.8
Ah.08g220810 Amaranthus hybridus HOM05D005325 ORTHO05D008457 2.1e-21 106.7 164 36.6
Manes.02G121500 Manihot esculenta HOM05D005325 ORTHO05D008457 2.1e-21 106.7 178 36.5
Os03g0265200 Oryza sativa ssp. japonica HOM05D005325 ORTHO05D008457 2.1e-21 106.7 171 36.3
CANSAT54G0458 Cannabis sativa HOM05D005325 ORTHO05D008457 2.7e-21 106.3 174 35.6
Psat2g059320 Pisum sativum HOM05D005325 ORTHO05D008457 2.7e-21 106.3 175 35.4
PGR119G0476 Punica granatum HOM05D005325 ORTHO05D008457 2.7e-21 106.3 159 39.0
BolC4t23643H Brassica oleracea HOM05D005325 ORTHO05D008457 3.5e-21 105.9 172 37.8
Potri.001G249400 Populus trichocarpa HOM05D005325 ORTHO05D008457 3.5e-21 105.9 190 35.3
Rhsim13G0071900 Rhododendron simsii HOM05D005325 ORTHO05D008457 3.5e-21 105.9 173 34.7
Hund04885 Selenicereus undatus HOM05D005325 ORTHO05D008457 3.5e-21 105.9 160 37.5
PGSC0003DMG400020866 Solanum tuberosum HOM05D005325 ORTHO05D008457 3.5e-21 105.9 175 34.3
BcaB02g10271 Brassica carinata HOM05D005325 ORTHO05D008457 4.6e-21 105.5 186 36.0
AUR62020101 Chenopodium quinoa HOM05D005325 ORTHO05D008457 6.0e-21 105.1 167 34.1
RcHm_v2.0_Chr5g0068731 Rosa chinensis HOM05D005325 ORTHO05D008457 6.0e-21 105.1 173 37.0
DCAR_007389 Daucus carota HOM05D005325 ORTHO05D008457 7.9e-21 104.8 173 34.7
FAN11G0298 Fragaria x ananassa HOM05D005325 ORTHO05D008457 7.9e-21 104.8 173 36.4
Mapoly0026s0005 Marchantia polymorpha HOM05D005325 ORTHO05D008457 7.9e-21 104.8 193 35.8
Sabra16G0151500 Salix brachista HOM05D005325 ORTHO05D008457 7.9e-21 104.8 161 37.3
Aa31LG5G6860 Aethionema arabicum HOM05D005325 ORTHO05D008457 1.0e-20 104.4 171 36.3
Cpa.g.sc112.50 Carica papaya HOM05D005325 ORTHO05D008457 1.0e-20 104.4 175 35.4
MBI14_g04425_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 1.0e-20 104.4 160 39.4
Ciclev10029368m.g Citrus clementina HOM05D005325 ORTHO05D008457 1.3e-20 104.0 173 34.1
CsaV3_6G016370 Cucumis sativus L. HOM05D005325 ORTHO05D008457 1.3e-20 104.0 175 35.4
Prupe.6G060500 Prunus persica HOM05D005325 ORTHO05D008457 1.3e-20 104.0 173 34.7
AUR62001679 Chenopodium quinoa HOM05D005325 ORTHO05D008457 1.8e-20 103.6 167 33.5
MELO3C025867.2 Cucumis melo HOM05D005325 ORTHO05D008457 1.8e-20 103.6 175 34.9
HPP92_015197 Vanilla planifolia HOM05D005325 ORTHO05D008457 1.8e-20 103.6 159 38.4
MSTRG.18491 Avicennia marina HOM05D005325 ORTHO05D008457 2.3e-20 103.2 174 36.2
Glyma.02G225500 Glycine max HOM05D005325 ORTHO05D008457 2.3e-20 103.2 173 34.7
Oeu019913.1 Olea europaea HOM05D005325 ORTHO05D008457 2.3e-20 103.2 190 33.2
Sed0000838 Sechium edule HOM05D005325 ORTHO05D008457 3.0e-20 102.8 191 33.5
CAN.G700.24 Capsicum annuum HOM05D005325 ORTHO05D008457 3.9e-20 102.4 173 34.1
Nitab4.5_0000408g0140 Nicotiana tabacum HOM05D005325 ORTHO05D008457 3.9e-20 102.4 171 33.3
Phvul.008G262400 Phaseolus vulgaris HOM05D005325 ORTHO05D008457 3.9e-20 102.4 171 33.9
TWI31G1198 Tripterygium wilfordii HOM05D005325 ORTHO05D008457 3.9e-20 102.4 175 33.1
Peaxi162Scf00116g00163 Petunia axillaris HOM05D005325 ORTHO05D008457 5.1e-20 102.1 174 34.5
Ca_05587_v3 Cicer arietinum L. HOM05D005325 ORTHO05D008457 6.7e-20 101.7 175 34.3
FAN21G2059 Fragaria x ananassa HOM05D005325 ORTHO05D008457 6.7e-20 101.7 158 38.6
FAN25G2817 Fragaria x ananassa HOM05D005325 ORTHO05D008457 6.7e-20 101.7 173 35.8
Lalb_Chr04g0252301 Lupinus albus HOM05D005325 ORTHO05D008457 6.7e-20 101.7 178 36.0
unitig_62.g23862 Utricularia gibba HOM05D005325 ORTHO05D008457 6.7e-20 101.7 174 36.8
unitig_64.g29774 Utricularia gibba HOM05D005325 ORTHO05D008457 6.7e-20 101.7 174 36.8
Migut.D00728 Erythranthe guttata HOM05D005325 ORTHO05D008457 8.7e-20 101.3 158 38.0
Thecc.09G305000 Theobroma cacao HOM05D005325 ORTHO05D008457 8.7e-20 101.3 171 35.7
CSS0007520 Camellia sinensis var. sinensis HOM05D005325 ORTHO05D008457 1.5e-19 100.5 173 34.1
CSS0011737 Camellia sinensis var. sinensis HOM05D005325 ORTHO05D008457 1.5e-19 100.5 173 34.1
Dinv28619 Davidia involucrata HOM05D005325 ORTHO05D008457 1.5e-19 100.5 191 33.0
TPR.G24020 Trifolium pratense HOM05D005325 ORTHO05D008457 3.3e-19 99.4 177 33.9
VMungo0647G2564 Vigna mungo HOM05D005325 ORTHO05D008457 3.3e-19 99.4 171 36.8
Pp3c13_16720 Physcomitrium patens HOM05D005325 ORTHO05D008457 5.6e-19 98.6 191 31.9
Duzib170G0996 Durio zibethinus HOM05D005325 ORTHO05D008457 7.4e-19 98.2 171 34.5
Eucgr.J01937 Eucalyptus grandis HOM05D005325 ORTHO05D008457 7.4e-19 98.2 160 36.9
Glyma.14G192300 Glycine max HOM05D005325 ORTHO05D008457 7.4e-19 98.2 169 36.1
BolC4t27390H Brassica oleracea HOM05D005325 ORTHO05D008457 9.6e-19 97.8 158 38.0
Gohir.D05G090700 Gossypium hirsutum HOM05D005325 ORTHO05D008457 9.6e-19 97.8 171 35.1
arahy.Tifrunner.gnm1.ann1.CQ7B2G Arachis hypogaea HOM05D005325 ORTHO05D008457 1.3e-18 97.4 175 33.7
arahy.Tifrunner.gnm1.ann1.VY3BKH Arachis hypogaea HOM05D005325 ORTHO05D008457 1.3e-18 97.4 176 33.5
Cfa011661 Carpinus fangiana HOM05D005325 ORTHO05D008457 1.3e-18 97.4 173 32.4
BcaB06g28320 Brassica carinata HOM05D005325 ORTHO05D008457 1.6e-18 97.1 171 35.7
CiPaw.13G080600 Carya illinoinensis HOM05D005325 ORTHO05D008457 1.6e-18 97.1 173 34.7
Medtr5g069880 Medicago truncatula HOM05D005325 ORTHO05D008457 1.6e-18 97.1 172 34.9
QL01p037417 Quercus lobata HOM05D005325 ORTHO05D008457 1.6e-18 97.1 171 33.9
Gorai.009G093200 Gossypium raimondii HOM05D005325 ORTHO05D008457 2.1e-18 96.7 171 34.5
LjContig00155g0003403 Lotus japonicus HOM05D005325 ORTHO05D008457 2.1e-18 96.7 174 32.8
Haze_24265 Corylus avellana HOM05D005325 ORTHO05D008457 2.8e-18 96.3 173 31.8
ATR0618G365 Amborella trichopoda HOM05D005325 ORTHO05D008457 3.7e-18 95.9 173 35.8
AagrBONN_evm.TU.Sc2ySwM_362.272 Anthoceros agrestis HOM05D005325 ORTHO05D008457 4.8e-18 95.5 167 34.7
A04p22570 Brassica napus HOM05D005325 ORTHO05D008457 4.8e-18 95.5 194 34.5
BraA04t17802Z Brassica rapa HOM05D005325 ORTHO05D008457 4.8e-18 95.5 158 38.0
SGA_v2.0_scaffold8G04497 Striga asiatica HOM05D005325 ORTHO05D008457 4.8e-18 95.5 173 32.4
GSVIVG01024786001 Vitis vinifera HOM05D005325 ORTHO05D008457 4.8e-18 95.5 173 32.9
BcaC02g08075 Brassica carinata HOM05D005325 ORTHO05D008457 6.2e-18 95.1 159 37.1
PSO339G0931 Papaver somniferum HOM05D005325 ORTHO05D008457 6.2e-18 95.1 174 34.5
PSO384G1123 Papaver somniferum HOM05D005325 ORTHO05D008457 1.4e-17 94.0 174 33.9
Gohir.A05G089800 Gossypium hirsutum HOM05D005325 ORTHO05D008457 2.4e-17 93.2 171 33.9
AagrBONN_evm.TU.Sc2ySwM_362.267 Anthoceros agrestis HOM05D005325 ORTHO05D008457 6.9e-17 91.7 167 34.1
Cre03.g146707 Chlamydomonas reinhardtii HOM05D005325 ORTHO05D008457 6.9e-17 91.7 169 32.5
Aqoxy4G02653 Aquilegia oxysepala HOM05D005325 ORTHO05D008457 9.0e-17 91.3 173 30.6
SHI11316 Sapria himalayana HOM05D005325 ORTHO05D008457 7.6e-16 88.2 174 31.6
CDE10G0077 Ceratophyllum demersum HOM05D000561 ORTHO05D000514 1.9e-14 83.6 112 42.9
SMO351G0628 Selaginella moellendorffii HOM05D005325 ORTHO05D008457 6.7e-12 75.1 149 32.9
Duzib168G2216 Durio zibethinus HOM05D005325 ORTHO05D008457 1.9e-11 73.6 163 29.4
FAN16G2295 Fragaria x ananassa HOM05D005325 ORTHO05D008457 4.3e-11 72.4 149 31.5
Lj1P141T46 Lonicera japonica HOM05D005325 ORTHO05D008457 5.6e-11 72.0 153 30.1
TAR636G1969 Trochodendron aralioides HOM05D005325 ORTHO05D008457 7.4e-11 71.6 148 29.1
Thhalv10017876m.g Eutrema salsugineum HOM05D005325 ORTHO05D008457 9.6e-11 71.2 125 34.4
TAR633G2421 Trochodendron aralioides HOM05D005325 ORTHO05D008457 2.1e-10 70.1 153 28.8
Nitab4.5_0006983g0030 Nicotiana tabacum HOM05D005325 ORTHO05D008457 3.1e-09 66.2 146 28.1
MBI14_g39232_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 1.5e-08 63.9 83 47.0


User provided reference genes

Program Settings