Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_27504 Corylus avellana HOM05D005644 ORTHO05D007092 6.6e-123 444.1 236 100.0
Mapoly0106s0034 Marchantia polymorpha HOM05D005644 ORTHO05D007092 6.5e-46 188.3 147 59.9
PRCOL_00001837 Prasinoderma coloniale HOM05D005644 ORTHO05D007092 2.5e-45 186.4 162 53.1
Pp3c7_6320 Physcomitrium patens HOM05D005644 ORTHO05D007092 3.2e-45 186.0 149 59.7
SMO137G0236 Selaginella moellendorffii HOM05D005644 ORTHO05D007092 4.2e-45 185.7 150 58.0
MCO15G254 Micromonas commoda HOM05D005644 ORTHO05D007092 5.5e-45 185.3 178 48.3
Eucgr.I02428 Eucalyptus grandis HOM05D005644 ORTHO05D007092 9.4e-45 184.5 142 58.5
CANSAT01G2444 Cannabis sativa HOM05D005644 ORTHO05D007092 3.6e-44 182.6 142 57.7
Ciclev10022394m.g Citrus clementina HOM05D005644 ORTHO05D007092 3.6e-44 182.6 142 57.7
MELO3C026580.2 Cucumis melo HOM05D005644 ORTHO05D007092 4.7e-44 182.2 142 57.7
CiPaw.02G018800 Carya illinoinensis HOM05D005644 ORTHO05D007092 6.1e-44 181.8 142 57.7
MD02G1145400 Malus domestica HOM05D005644 ORTHO05D007092 6.1e-44 181.8 142 57.0
AagrBONN_evm.TU.Sc2ySwM_362.2207 Anthoceros agrestis HOM05D005644 ORTHO05D007092 8.0e-44 181.4 144 57.6
CsaV3_3G042790 Cucumis sativus L. HOM05D005644 ORTHO05D007092 8.0e-44 181.4 142 57.7
Potri.005G121700 Populus trichocarpa HOM05D005644 ORTHO05D007092 8.0e-44 181.4 142 57.0
Potri.007G023500 Populus trichocarpa HOM05D005644 ORTHO05D007092 8.0e-44 181.4 142 57.0
Sed0008907 Sechium edule HOM05D005644 ORTHO05D007092 8.0e-44 181.4 142 56.3
Atru.chr7.2312 Acer truncatum HOM05D005644 ORTHO05D007092 1.4e-43 180.6 142 56.3
BcaB08g34803 Brassica carinata HOM05D005644 ORTHO05D007092 1.4e-43 180.6 142 54.2
Carub.0003s3246 Capsella rubella HOM05D005644 ORTHO05D007092 1.4e-43 180.6 142 55.6
PSO675G1163 Papaver somniferum HOM05D005644 ORTHO05D007092 1.4e-43 180.6 142 54.9
Prupe.7G156300 Prunus persica HOM05D005644 ORTHO05D007092 1.4e-43 180.6 142 56.3
Sp3g31700 Schrenkiella parvula HOM05D005644 ORTHO05D007092 1.4e-43 180.6 142 54.2
vmacro17823 Vaccinium macrocarpon HOM05D005644 ORTHO05D007092 1.4e-43 180.6 142 57.0
Aqoxy6G01133 Aquilegia oxysepala HOM05D005644 ORTHO05D007092 1.8e-43 180.3 142 57.0
A06p33310 Brassica napus HOM05D005644 ORTHO05D007092 1.8e-43 180.3 142 54.2
C03p59070 Brassica napus HOM05D005644 ORTHO05D007092 1.8e-43 180.3 142 54.2
BolC3t18168H Brassica oleracea HOM05D005644 ORTHO05D007092 1.8e-43 180.3 142 54.2
Thhalv10022866m.g Eutrema salsugineum HOM05D005644 ORTHO05D007092 1.8e-43 180.3 142 54.9
PGR031G1764 Punica granatum HOM05D005644 ORTHO05D007092 1.8e-43 180.3 142 54.9
Aa31LG8G15730 Aethionema arabicum HOM05D005644 ORTHO05D007092 2.3e-43 179.9 142 54.9
AL3G51550 Arabidopsis lyrata HOM05D005644 ORTHO05D007092 2.3e-43 179.9 142 54.9
AT2G18290 Arabidopsis thaliana HOM05D005644 ORTHO05D007092 2.3e-43 179.9 142 54.9
Lj2A454T58 Lonicera japonica HOM05D005644 ORTHO05D007092 2.3e-43 179.9 142 57.0
QL06p046522 Quercus lobata HOM05D005644 ORTHO05D007092 2.3e-43 179.9 142 55.6
SalBow5G1882 Salvia bowleyana HOM05D005644 ORTHO05D007092 2.3e-43 179.9 142 57.0
Ca_22319_v3 Cicer arietinum L. HOM05D005644 ORTHO05D007092 3.0e-43 179.5 142 56.3
Duzib264G1010 Durio zibethinus HOM05D005644 ORTHO05D007092 3.0e-43 179.5 142 56.3
PSO541G0643 Papaver somniferum HOM05D005644 ORTHO05D007092 3.0e-43 179.5 142 54.9
SGA_v2.0_scaffold44G16541 Striga asiatica HOM05D005644 ORTHO05D007092 3.0e-43 179.5 142 56.3
THA.LOC104819776 Tarenaya hassleriana HOM05D005644 ORTHO05D007092 3.0e-43 179.5 142 57.0
VMungo0251G3244 Vigna mungo HOM05D005644 ORTHO05D007092 3.0e-43 179.5 140 56.4
Gohir.A02G166400 Gossypium hirsutum HOM05D005644 ORTHO05D007092 4.0e-43 179.1 142 55.6
Nn1g04949 Nelumbo nucifera HOM05D005644 ORTHO05D007092 4.0e-43 179.1 142 56.3
Phvul.003G254800 Phaseolus vulgaris HOM05D005644 ORTHO05D007092 4.0e-43 179.1 140 56.4
arahy.Tifrunner.gnm1.ann1.59MT2Q Arachis hypogaea HOM05D005644 ORTHO05D007092 5.2e-43 178.7 142 54.9
arahy.Tifrunner.gnm1.ann1.SR5TCU Arachis hypogaea HOM05D005644 ORTHO05D007092 5.2e-43 178.7 142 54.9
CSS0024834 Camellia sinensis var. sinensis HOM05D005644 ORTHO05D007092 5.2e-43 178.7 135 60.0
Gohir.D03G013600 Gossypium hirsutum HOM05D005644 ORTHO05D007092 5.2e-43 178.7 142 55.6
Gorai.003G013900 Gossypium raimondii HOM05D005644 ORTHO05D007092 5.2e-43 178.7 142 55.6
Os05g0579800 Oryza sativa ssp. japonica HOM05D005644 ORTHO05D007092 5.2e-43 178.7 142 55.6
Thecc.01G033400 Theobroma cacao HOM05D005644 ORTHO05D007092 5.2e-43 178.7 142 55.6
Glyma.16G138200 Glycine max HOM05D005644 ORTHO05D007092 6.8e-43 178.3 140 55.7
TAR101G0001 Trochodendron aralioides HOM05D005644 ORTHO05D007092 6.8e-43 178.3 142 56.3
unitig_37.g12363 Utricularia gibba HOM05D005644 ORTHO05D007092 6.8e-43 178.3 151 55.0
Zm00001eb342630 Zea mays HOM05D005644 ORTHO05D007092 6.8e-43 178.3 142 57.0
Medtr8g077200 Medicago truncatula HOM05D005644 ORTHO05D007092 8.8e-43 177.9 142 55.6
Psat4g094240 Pisum sativum HOM05D005644 ORTHO05D007092 8.8e-43 177.9 142 55.6
TWI73G0320 Tripterygium wilfordii HOM05D005644 ORTHO05D007092 8.8e-43 177.9 142 54.9
EL10Ac4g07935 Beta vulgaris HOM05D005644 ORTHO05D007092 1.2e-42 177.6 144 56.2
Dinv39995 Davidia involucrata HOM05D005644 ORTHO05D007092 1.2e-42 177.6 142 56.3
MBI02_g12270_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 1.2e-42 177.6 161 50.9
GSVIVG01018941001 Vitis vinifera HOM05D005644 ORTHO05D007092 1.2e-42 177.6 142 57.0
Cc07_g09670 Coffea canephora HOM05D005644 ORTHO05D007092 1.5e-42 177.2 140 57.9
FvH4_1g13080 Fragaria vesca HOM05D005644 ORTHO05D007092 1.5e-42 177.2 142 56.3
FAN19G1519 Fragaria x ananassa HOM05D005644 ORTHO05D007092 2.0e-42 176.8 142 56.3
Sc16g0002690 Simmondsia chinensis HOM05D005644 ORTHO05D007092 2.0e-42 176.8 142 55.6
MSTRG.3592 Avicennia marina HOM05D005644 ORTHO05D007092 2.6e-42 176.4 142 55.6
Migut.L00368 Erythranthe guttata HOM05D005644 ORTHO05D007092 2.6e-42 176.4 142 54.9
Migut.L00376 Erythranthe guttata HOM05D005644 ORTHO05D007092 2.6e-42 176.4 142 54.9
Lalb_Chr09g0333481 Lupinus albus HOM05D005644 ORTHO05D007092 2.6e-42 176.4 142 54.9
ATR0594G186 Amborella trichopoda HOM05D005644 ORTHO05D007092 3.4e-42 176.0 142 54.9
FvH4_5g29620 Fragaria vesca HOM05D005644 ORTHO05D007092 3.4e-42 176.0 142 56.3
Manes.01G136400 Manihot esculenta HOM05D005644 ORTHO05D007092 3.4e-42 176.0 142 54.2
Manes.02G095200 Manihot esculenta HOM05D005644 ORTHO05D007092 3.4e-42 176.0 142 54.9
Oeu050374.1 Olea europaea HOM05D005644 ORTHO05D007092 3.4e-42 176.0 142 56.3
HanXRQChr09g0261331 Helianthus annuus HOM05D005644 ORTHO05D007092 4.4e-42 175.6 142 54.2
Lsat_1_v5_gn_4_151201 Lactuca sativa HOM05D005644 ORTHO05D007092 4.4e-42 175.6 144 54.9
Hund21503 Selenicereus undatus HOM05D005644 ORTHO05D007092 5.7e-42 175.3 142 54.9
Lj4g0022669 Lotus japonicus HOM05D005644 ORTHO05D007092 7.5e-42 174.9 140 55.7
ECA232G0363 Erigeron canadensis HOM05D005644 ORTHO05D007092 9.8e-42 174.5 144 54.9
Nitab4.5_0000136g0330 Nicotiana tabacum HOM05D005644 ORTHO05D007092 1.3e-41 174.1 142 55.6
RcHm_v2.0_Chr2g0101251 Rosa chinensis HOM05D005644 ORTHO05D007092 1.3e-41 174.1 142 54.9
Zm00001eb294590 Zea mays HOM05D005644 ORTHO05D007092 1.7e-41 173.7 142 55.6
CAN.G53.17 Capsicum annuum HOM05D005644 ORTHO05D007092 3.7e-41 172.6 142 54.9
PGSC0003DMG400015483 Solanum tuberosum HOM05D005644 ORTHO05D007092 3.7e-41 172.6 142 55.6
Oeu002799.2 Olea europaea HOM05D005644 ORTHO05D007092 8.3e-41 171.4 142 54.2
Solyc02g062680.3 Solanum lycopersicum HOM05D005644 ORTHO05D007092 8.3e-41 171.4 142 54.9
Sopen02g013700 Solanum pennellii HOM05D005644 ORTHO05D007092 8.3e-41 171.4 142 54.9
THA.LOC104804235 Tarenaya hassleriana HOM05D005644 ORTHO05D007092 8.3e-41 171.4 142 53.5
CDE04G3399 Ceratophyllum demersum HOM05D005644 ORTHO05D007092 1.8e-40 170.2 135 55.6
Glyma.02G055400 Glycine max HOM05D005644 ORTHO05D007092 1.8e-40 170.2 140 54.3
PGR083G1765 Punica granatum HOM05D005644 ORTHO05D007092 1.8e-40 170.2 142 52.8
Nitab4.5_0005482g0020 Nicotiana tabacum HOM05D005644 ORTHO05D007092 3.1e-40 169.5 144 54.9
BraA06t26260Z Brassica rapa HOM05D005644 ORTHO05D007092 7.0e-40 168.3 135 54.1
ClCG10G013900 Citrullus lanatus HOM05D005644 ORTHO05D007092 1.6e-39 167.2 168 48.2
Cre13.g571850 Chlamydomonas reinhardtii HOM05D005644 ORTHO05D007092 4.5e-39 165.6 143 51.7
Sabra05G0100200 Salix brachista HOM05D005644 ORTHO05D007092 4.5e-39 165.6 132 57.6
FAN28G2376 Fragaria x ananassa HOM05D005644 ORTHO05D003509 2.9e-38 162.9 133 56.4
AUR62020530 Chenopodium quinoa HOM05D005644 ORTHO05D007092 3.8e-38 162.5 144 52.1
AUR62043224 Chenopodium quinoa HOM05D005644 ORTHO05D007092 3.8e-38 162.5 144 52.1
Atru.chr3.600 Acer truncatum HOM05D005644 ORTHO05D007092 6.6e-38 161.8 142 50.7
TPR.G24098 Trifolium pratense HOM05D005644 ORTHO05D007092 1.9e-37 160.2 181 44.2
BolC7t40857H Brassica oleracea HOM05D005644 ORTHO05D007092 4.3e-37 159.1 131 53.4
FAN23G1669 Fragaria x ananassa HOM05D005644 ORTHO05D007092 4.3e-37 159.1 135 55.6
Rhsim11G0151400 Rhododendron simsii HOM05D005644 ORTHO05D007092 1.2e-36 157.5 195 42.1
FAN08G2945 Fragaria x ananassa HOM05D005644 ORTHO05D007092 3.6e-36 156.0 133 54.9
AUR62034193 Chenopodium quinoa HOM05D005644 ORTHO05D007092 4.7e-36 155.6 144 49.3
BcaC06g36396 Brassica carinata HOM05D005644 ORTHO05D007092 3.7e-33 146.0 121 52.1
Peaxi162Scf00008g03525 Petunia axillaris HOM05D005644 ORTHO05D007092 6.4e-33 145.2 142 50.0
Cpa.g.sc6.131 Carica papaya HOM05D005644 ORTHO05D007092 9.2e-32 141.4 103 59.2
CBR_g49399 Chara braunii HOM05D005644 ORTHO05D007092 2.3e-30 136.7 103 55.3
SEGI_22782 Sequoiadendron giganteum HOM05D005644 ORTHO05D007092 3.0e-30 136.3 112 54.5
Hma1.2p1_0789F.1_g218290 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 8.6e-30 134.8 109 56.0
FAN26G0781 Fragaria x ananassa HOM05D000577 ORTHO05D003509 1.5e-29 134.0 103 57.3
FAN18G2110 Fragaria x ananassa HOM05D005644 ORTHO05D007092 2.0e-26 123.6 142 43.7
SGA_v2.0_scaffold2G01321 Striga asiatica HOM05D005644 ORTHO05D007092 1.7e-25 120.6 103 54.4
HPP92_023420 Vanilla planifolia HOM05D005644 ORTHO05D007092 1.7e-25 120.6 142 43.0
MBI08_g40822_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 3.2e-24 116.3 176 39.2
CARHR108880 Cardamine hirsuta HOM05D005644 ORTHO05D007092 3.3e-21 106.3 88 53.4
MBI18_g01974_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 5.1e-14 82.4 71 52.1
FAN13G0528 Fragaria x ananassa HOM05D005644 ORTHO05D007092 1.5e-13 80.9 140 33.6
C07p04570 Brassica napus HOM05D005644 ORTHO05D007092 3.3e-13 79.7 107 35.5
MBI02_g42708_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 6.2e-12 75.5 134 35.1
MBI02_g23461_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 2.0e-10 70.5 105 41.0
DCAR_025950 Daucus carota HOM05D005644 ORTHO05D007092 4.9e-09 65.9 52 51.9
Hund21501 Selenicereus undatus HOM05D005644 ORTHO05D007092 4.9e-09 65.9 56 51.8
MBI18_g16980_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 1.7e-06 57.4 51 47.1
Hma1.2p1_2451F.1_g322360 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 6.6e-06 55.5 104 31.7


User provided reference genes

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