Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_27412 Corylus avellana HOM05D005139 ORTHO05D006125 1.5e-164 582.8 288 100.0
Mapoly0145s0019 Marchantia polymorpha HOM05D005139 ORTHO05D006125 3.2e-55 219.5 287 42.2
AL2G39160 Arabidopsis lyrata HOM05D005139 ORTHO05D006125 1.2e-54 217.6 271 42.1
BcaC08g47457 Brassica carinata HOM05D005139 ORTHO05D006125 1.2e-54 217.6 271 42.1
A07p43980 Brassica napus HOM05D005139 ORTHO05D006125 1.6e-54 217.2 271 42.1
C06p52650 Brassica napus HOM05D005139 ORTHO05D006125 1.6e-54 217.2 271 42.1
BraA07t31905Z Brassica rapa HOM05D005139 ORTHO05D006125 1.6e-54 217.2 271 42.1
SMO244G0086 Selaginella moellendorffii HOM05D005139 ORTHO05D006125 4.7e-54 215.7 271 41.7
Potri.001G389300 Populus trichocarpa HOM05D005139 ORTHO05D006125 5.2e-53 212.2 271 41.0
CAN.G443.5 Capsicum annuum HOM05D005139 ORTHO05D006125 1.2e-52 211.1 258 42.2
BcaB03g16034 Brassica carinata HOM05D005139 ORTHO05D006125 1.5e-52 210.7 271 41.3
Carub.0002s2560 Capsella rubella HOM05D005139 ORTHO05D006125 2.6e-52 209.9 271 41.3
Manes.15G095700 Manihot esculenta HOM05D005139 ORTHO05D006125 4.4e-52 209.1 271 40.6
AagrBONN_evm.TU.Sc2ySwM_368.2003 Anthoceros agrestis HOM05D005139 ORTHO05D006125 5.7e-52 208.8 265 42.6
Eucgr.F01248 Eucalyptus grandis HOM05D005139 ORTHO05D006125 5.7e-52 208.8 271 40.2
Actinidia12584 Actinidia chinensis HOM05D005139 ORTHO05D006125 9.7e-52 208.0 286 40.2
Solyc12g014320.2 Solanum lycopersicum HOM05D005139 ORTHO05D006125 2.2e-51 206.8 244 43.4
Sopen12g006100 Solanum pennellii HOM05D005139 ORTHO05D006125 2.2e-51 206.8 244 43.4
Cfa019555 Carpinus fangiana HOM05D005139 ORTHO05D006125 2.8e-51 206.5 279 40.5
Ciclev10023690m.g Citrus clementina HOM05D005139 ORTHO05D006125 2.8e-51 206.5 271 40.2
Thhalv10018370m.g Eutrema salsugineum HOM05D005139 ORTHO05D006125 4.8e-51 205.7 271 40.6
Atru.chr2.2128 Acer truncatum HOM05D005139 ORTHO05D006125 6.3e-51 205.3 271 39.5
Aqoxy3G02037 Aquilegia oxysepala HOM05D005139 ORTHO05D006125 6.3e-51 205.3 269 40.1
Zm00001eb399210 Zea mays HOM05D005139 ORTHO05D006125 1.1e-50 204.5 286 38.5
Sp5g33790 Schrenkiella parvula HOM05D005139 ORTHO05D006125 1.4e-50 204.1 244 43.4
TWI38G1771 Tripterygium wilfordii HOM05D005139 ORTHO05D006125 1.4e-50 204.1 271 39.5
Ca_19229_v3 Cicer arietinum L. HOM05D005139 ORTHO05D006125 3.1e-50 203.0 266 42.5
Migut.H02003 Erythranthe guttata HOM05D005139 ORTHO05D006125 3.1e-50 203.0 244 42.6
ATR0127G028 Amborella trichopoda HOM05D005139 ORTHO05D006125 4.1e-50 202.6 244 41.8
MCO01G684 Micromonas commoda HOM05D005139 ORTHO05D006125 4.1e-50 202.6 287 39.4
CSS0042561 Camellia sinensis var. sinensis HOM05D005139 ORTHO05D006125 5.3e-50 202.2 271 39.5
SalBow7G0115 Salvia bowleyana HOM05D005139 ORTHO05D006125 5.3e-50 202.2 286 39.2
Cc05_g10990 Coffea canephora HOM05D005139 ORTHO05D006125 7.0e-50 201.8 271 39.1
SalBow7G2844 Salvia bowleyana HOM05D005139 ORTHO05D006125 7.0e-50 201.8 286 39.2
Aa31LG4G2260 Aethionema arabicum HOM05D005139 ORTHO05D006125 9.1e-50 201.4 245 43.3
Pp3c16_8790 Physcomitrium patens HOM05D005139 ORTHO05D006125 1.2e-49 201.1 271 40.2
RcHm_v2.0_Chr5g0030761 Rosa chinensis HOM05D005139 ORTHO05D006125 1.6e-49 200.7 266 39.5
AT1G78770 Arabidopsis thaliana HOM05D005139 ORTHO05D006125 2.7e-49 199.9 271 39.9
MELO3C008916.2 Cucumis melo HOM05D005139 ORTHO05D006125 2.7e-49 199.9 266 41.0
CsaV3_4G030530 Cucumis sativus L. HOM05D005139 ORTHO05D006125 2.7e-49 199.9 266 41.0
Medtr8g058380 Medicago truncatula HOM05D005139 ORTHO05D006125 2.7e-49 199.9 266 42.5
Sabra11G0096100 Salix brachista HOM05D005139 ORTHO05D006125 3.5e-49 199.5 282 39.0
unitig_26.g9517 Utricularia gibba HOM05D005139 ORTHO05D006125 3.5e-49 199.5 266 39.5
TPR.G5739 Trifolium pratense HOM05D005139 ORTHO05D006125 5.9e-49 198.7 266 41.7
CARHR072310 Cardamine hirsuta HOM05D005139 ORTHO05D006125 7.7e-49 198.4 243 42.4
HanXRQChr11g0331031 Helianthus annuus HOM05D005139 ORTHO05D006125 1.0e-48 198.0 229 45.4
Lj8A148G34 Lonicera japonica HOM05D005139 ORTHO05D006125 1.0e-48 198.0 244 43.0
Dinv18369 Davidia involucrata HOM05D005139 ORTHO05D006125 1.3e-48 197.6 271 39.1
Potri.011G108800 Populus trichocarpa HOM05D005139 ORTHO05D006125 1.3e-48 197.6 237 43.0
Thecc.07G118200 Theobroma cacao HOM05D005139 ORTHO05D006125 2.2e-48 196.8 243 42.4
MD11G1264600 Malus domestica HOM05D005139 ORTHO05D006125 1.1e-47 194.5 229 43.7
THA.LOC104812316 Tarenaya hassleriana HOM05D005139 ORTHO05D006125 1.1e-47 194.5 234 43.6
Aqoxy4G00276 Aquilegia oxysepala HOM05D005139 ORTHO05D006125 1.9e-47 193.7 242 41.3
CANSAT35G0508 Cannabis sativa HOM05D005139 ORTHO05D006125 1.9e-47 193.7 232 44.4
HanXRQChr15g0495211 Helianthus annuus HOM05D005139 ORTHO05D006125 1.9e-47 193.7 229 43.7
Psat4g140160 Pisum sativum HOM05D005139 ORTHO05D006125 2.5e-47 193.4 266 41.0
CiPaw.11G159600 Carya illinoinensis HOM05D005139 ORTHO05D006125 3.2e-47 193.0 229 43.2
FvH4_3g18210 Fragaria vesca HOM05D005139 ORTHO05D006125 4.2e-47 192.6 229 41.9
FAN25G1917 Fragaria x ananassa HOM05D005139 ORTHO05D006125 4.2e-47 192.6 229 41.9
PSO063G5899 Papaver somniferum HOM05D005139 ORTHO05D006125 4.2e-47 192.6 235 41.7
PSO782G2705 Papaver somniferum HOM05D005139 ORTHO05D006125 4.2e-47 192.6 235 41.7
C03p92750 Brassica napus HOM05D005139 ORTHO05D006125 1.2e-46 191.0 237 42.2
FAN21G0160 Fragaria x ananassa HOM05D005139 ORTHO05D006125 1.2e-46 191.0 229 41.5
Prupe.4G162300 Prunus persica HOM05D005139 ORTHO05D006125 2.1e-46 190.3 229 44.1
Peaxi162Scf00000g06812 Petunia axillaris HOM05D005139 ORTHO05D006125 2.7e-46 189.9 237 43.0
Sed0024992 Sechium edule HOM05D005139 ORTHO05D006125 3.6e-46 189.5 229 43.7
GSVIVG01014182001 Vitis vinifera HOM05D005139 ORTHO05D006125 4.7e-46 189.1 237 41.8
Gohir.D01G042704 Gossypium hirsutum HOM05D005139 ORTHO05D006125 6.1e-46 188.7 234 42.3
Gorai.002G053800 Gossypium raimondii HOM05D005139 ORTHO05D006125 6.1e-46 188.7 234 42.3
Ciclev10019589m.g Citrus clementina HOM05D005139 ORTHO05D006125 1.4e-45 187.6 234 41.9
COL.COLO4_17530 Corchorus olitorius HOM05D005139 ORTHO05D006125 1.4e-45 187.6 234 41.9
Duzib213G0634 Durio zibethinus HOM05D005139 ORTHO05D006125 1.4e-45 187.6 234 41.9
Phvul.011G165500 Phaseolus vulgaris HOM05D005139 ORTHO05D006125 4.0e-45 186.0 232 43.5
Zm00001eb010020 Zea mays HOM05D005139 ORTHO05D006125 4.0e-45 186.0 284 37.0
Lsat_1_v5_gn_7_102480 Lactuca sativa HOM05D005139 ORTHO05D006125 5.2e-45 185.7 227 42.3
Gohir.A01G053400 Gossypium hirsutum HOM05D005139 ORTHO05D006125 1.2e-44 184.5 234 41.5
Sc03g0010570 Simmondsia chinensis HOM05D005139 ORTHO05D006125 3.4e-44 183.0 232 40.9
Ah.04g164210 Amaranthus hybridus HOM05D005139 ORTHO05D006125 4.4e-44 182.6 247 40.5
FAN11G0516 Fragaria x ananassa HOM05D005139 ORTHO05D006125 4.4e-44 182.6 229 41.0
FAN16G0871 Fragaria x ananassa HOM05D005139 ORTHO05D006125 4.4e-44 182.6 229 41.0
Lalb_Chr03g0031181 Lupinus albus HOM05D005139 ORTHO05D006125 5.7e-44 182.2 229 43.2
ClCG04G002160 Citrullus lanatus HOM05D005139 ORTHO05D006125 2.2e-43 180.3 229 43.2
Glyma.06G228700 Glycine max HOM05D005139 ORTHO05D006125 2.8e-43 179.9 229 42.4
Lj3g0013017 Lotus japonicus HOM05D005139 ORTHO05D006125 2.8e-43 179.9 229 41.5
Glyma.12G156300 Glycine max HOM05D005139 ORTHO05D006125 4.8e-43 179.1 227 42.3
SEGI_23856 Sequoiadendron giganteum HOM05D005139 ORTHO05D006125 6.3e-43 178.7 210 45.2
ECA236G1068 Erigeron canadensis HOM05D005139 ORTHO05D006125 1.1e-42 177.9 273 36.6
Os03g0236966 Oryza sativa ssp. japonica HOM05D005139 ORTHO05D006125 1.1e-42 177.9 286 35.3
Cfa023795 Carpinus fangiana HOM05D005139 ORTHO05D006125 9.1e-42 174.9 281 37.7
MBI06_g15765_MAGBIO Magnolia biondii HOM05D005139 ORTHO05D006125 1.6e-41 174.1 229 41.0
PGR083G0616 Punica granatum HOM05D005139 ORTHO05D006125 2.2e-40 170.2 284 35.2
Haze_09316 Corylus avellana HOM05D005139 ORTHO05D006125 8.5e-40 168.3 209 42.6
SHI27616 Sapria himalayana HOM05D005139 ORTHO05D006125 2.5e-39 166.8 312 33.3
Nitab4.5_0000035g0250 Nicotiana tabacum HOM05D005139 ORTHO05D006125 4.2e-39 166.0 210 41.9
SGA_v2.0_scaffold130G34288 Striga asiatica HOM05D005139 ORTHO05D006125 8.0e-38 161.8 271 35.1
arahy.Tifrunner.gnm1.ann1.405FF9 Arachis hypogaea HOM05D005139 ORTHO05D006125 1.8e-37 160.6 232 39.2
arahy.Tifrunner.gnm1.ann1.J0RB3X Arachis hypogaea HOM05D005139 ORTHO05D006125 1.8e-37 160.6 232 39.2
QL08p026113 Quercus lobata HOM05D005139 ORTHO05D006125 8.8e-37 158.3 357 29.7
Cre13.g562950 Chlamydomonas reinhardtii HOM05D005139 ORTHO05D006125 2.2e-35 153.7 214 40.7
Oeu005379.1 Olea europaea HOM05D005139 ORTHO05D006125 6.3e-35 152.1 150 48.7
EL10Ac4g08361 Beta vulgaris HOM05D005139 ORTHO05D006125 1.4e-34 151.0 303 32.0
AUR62019588 Chenopodium quinoa HOM05D005139 ORTHO05D006125 7.8e-33 145.2 284 33.1
DCAR_013162 Daucus carota HOM05D005139 ORTHO05D006125 2.5e-31 140.2 178 41.0
AUR62037557 Chenopodium quinoa HOM05D005139 ORTHO05D006125 7.3e-31 138.7 289 32.2
CBR_g50377 Chara braunii HOM05D005139 ORTHO05D006125 2.9e-27 126.7 318 28.9
RcHm_v2.0_Chr3g0469831 Rosa chinensis HOM05D005139 ORTHO05D006125 8.3e-27 125.2 119 48.7
HPP92_004205 Vanilla planifolia HOM05D005139 ORTHO05D006125 8.3e-27 125.2 198 36.9
vmacro11947 Vaccinium macrocarpon HOM05D005139 ORTHO05D006125 1.1e-26 124.8 180 37.8
Hund10469 Selenicereus undatus HOM05D005139 ORTHO05D006125 2.7e-25 120.2 124 45.2
Ciclev10023408m.g Citrus clementina HOM05D005139 ORTHO05D006125 7.8e-25 118.6 188 37.2
RcHm_v2.0_Chr1g0337671 Rosa chinensis HOM05D005139 ORTHO05D006125 3.0e-24 116.7 119 46.2
Prupe.4G161700 Prunus persica HOM05D005139 ORTHO05D006125 1.1e-23 114.8 237 32.1
Nitab4.5_0007851g0020 Nicotiana tabacum HOM05D005139 ORTHO05D006125 2.5e-23 113.6 171 37.4
CDE06G2579 Ceratophyllum demersum HOM05D005139 ORTHO05D006125 1.6e-22 110.9 175 37.1
VMungo1127G1423 Vigna mungo HOM05D005139 ORTHO05D006125 1.3e-19 101.3 101 48.5
Dinv15003 Davidia involucrata HOM05D005139 ORTHO05D006125 2.9e-19 100.1 113 43.4
VMungo1127G2083 Vigna mungo HOM05D005139 ORTHO05D006125 2.9e-19 100.1 157 38.9
Cpa.g.sc77.24 Carica papaya HOM05D005139 ORTHO05D006125 5.4e-18 95.9 96 50.0
TAR626G0095 Trochodendron aralioides HOM05D005139 ORTHO05D006125 1.0e-16 91.7 90 47.8
Cpa.g.sc77.22 Carica papaya HOM05D005139 ORTHO05D006125 2.0e-12 77.4 144 31.9
PRCOL_00005307 Prasinoderma coloniale HOM05D005139 ORTHO05D006125 5.8e-12 75.9 268 22.8
Hund10473 Selenicereus undatus HOM05D005139 ORTHO05D006125 1.1e-10 71.6 157 30.6
Potri.001G389500 Populus trichocarpa HOM05D005139 ORTHO05D006125 7.8e-09 65.5 61 49.2


User provided reference genes

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