Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_27029 Corylus avellana HOM05D006520 ORTHO05D008405 5.1e-126 454.5 247 100.0
Cfa027367 Carpinus fangiana HOM05D006520 ORTHO05D008405 1.2e-50 204.1 255 47.8
Haze_27296 Corylus avellana HOM05D006520 ORTHO05D008405 7.6e-45 184.9 256 43.0
VMungo1127G1053 Vigna mungo HOM05D006520 ORTHO05D008405 4.6e-42 175.6 259 44.0
Mapoly0055s0094 Marchantia polymorpha HOM05D006520 ORTHO05D008405 7.8e-42 174.9 256 44.9
Pp3c15_18640 Physcomitrium patens HOM05D006520 ORTHO05D008405 5.1e-41 172.2 259 43.6
Phvul.011G139475 Phaseolus vulgaris HOM05D006520 ORTHO05D008405 1.1e-40 171.0 259 44.8
AL1G58660 Arabidopsis lyrata HOM05D006520 ORTHO05D008405 1.5e-40 170.6 264 42.8
AT1G50940 Arabidopsis thaliana HOM05D006520 ORTHO05D008405 1.5e-40 170.6 264 43.2
Lj8A167T45 Lonicera japonica HOM05D006520 ORTHO05D008405 1.5e-40 170.6 265 44.2
Thhalv10011599m.g Eutrema salsugineum HOM05D006520 ORTHO05D008405 1.9e-40 170.2 264 42.4
Sp1g37680 Schrenkiella parvula HOM05D006520 ORTHO05D008405 1.9e-40 170.2 263 43.3
DCAR_010030 Daucus carota HOM05D006520 ORTHO05D008405 5.6e-40 168.7 265 43.4
THA.LOC104817880 Tarenaya hassleriana HOM05D006520 ORTHO05D008405 5.6e-40 168.7 264 43.6
Cc05_g13380 Coffea canephora HOM05D006520 ORTHO05D008405 9.6e-40 167.9 265 42.3
PGSC0003DMG400001100 Solanum tuberosum HOM05D006520 ORTHO05D008405 9.6e-40 167.9 265 41.5
Atru.chr2.3238 Acer truncatum HOM05D006520 ORTHO05D008405 1.3e-39 167.5 261 43.7
Sed0027741 Sechium edule HOM05D006520 ORTHO05D008405 1.6e-39 167.2 261 42.5
ClCG05G014620 Citrullus lanatus HOM05D006520 ORTHO05D008405 2.1e-39 166.8 261 43.3
Gohir.A01G076200 Gossypium hirsutum HOM05D006520 ORTHO05D008405 2.1e-39 166.8 261 44.8
Gorai.002G084200 Gossypium raimondii HOM05D006520 ORTHO05D008405 2.1e-39 166.8 261 44.8
Solyc12g005200.3 Solanum lycopersicum HOM05D006520 ORTHO05D008405 2.1e-39 166.8 265 41.1
Lj3g0004956 Lotus japonicus HOM05D006520 ORTHO05D008405 2.8e-39 166.4 261 42.5
Nitab4.5_0000653g0110 Nicotiana tabacum HOM05D006520 ORTHO05D008405 2.8e-39 166.4 265 40.8
CAN.G315.8 Capsicum annuum HOM05D006520 ORTHO05D008405 3.6e-39 166.0 265 40.4
Lsat_1_v5_gn_7_65980 Lactuca sativa HOM05D006520 ORTHO05D008405 3.6e-39 166.0 260 41.9
Aa31LG10G3340 Aethionema arabicum HOM05D006520 ORTHO05D008405 4.8e-39 165.6 261 42.9
BcaB04g17242 Brassica carinata HOM05D006520 ORTHO05D008405 4.8e-39 165.6 262 42.4
CARHR040980 Cardamine hirsuta HOM05D006520 ORTHO05D008405 4.8e-39 165.6 264 42.8
HanXRQChr08g0234071 Helianthus annuus HOM05D006520 ORTHO05D008405 4.8e-39 165.6 261 42.5
Os03g0835400 Oryza sativa ssp. japonica HOM05D006520 ORTHO05D008405 4.8e-39 165.6 263 41.1
Ciclev10008777m.g Citrus clementina HOM05D006520 ORTHO05D008405 6.2e-39 165.2 264 42.8
QL08p012619 Quercus lobata HOM05D006520 ORTHO05D008405 6.2e-39 165.2 263 42.2
C03p89710 Brassica napus HOM05D006520 ORTHO05D008405 8.1e-39 164.9 261 42.1
Carub.0001s3988 Capsella rubella HOM05D006520 ORTHO05D008405 8.1e-39 164.9 264 41.7
Glyma.06G270300 Glycine max HOM05D006520 ORTHO05D008405 8.1e-39 164.9 261 42.9
Oeu021407.1 Olea europaea HOM05D006520 ORTHO05D008405 8.1e-39 164.9 265 43.0
arahy.Tifrunner.gnm1.ann1.45MNV2 Arachis hypogaea HOM05D006520 ORTHO05D008405 1.1e-38 164.5 262 41.6
Gohir.D01G063700 Gossypium hirsutum HOM05D006520 ORTHO05D008405 1.1e-38 164.5 261 44.4
BcaC01g01246 Brassica carinata HOM05D006520 ORTHO05D008405 1.4e-38 164.1 261 42.1
A08p03100 Brassica napus HOM05D006520 ORTHO05D008405 1.4e-38 164.1 261 42.1
BolC3t21294H Brassica oleracea HOM05D006520 ORTHO05D008405 1.4e-38 164.1 261 42.1
BraA08t32341Z Brassica rapa HOM05D006520 ORTHO05D008405 1.4e-38 164.1 261 42.1
CANSAT35G1182 Cannabis sativa HOM05D006520 ORTHO05D008405 1.4e-38 164.1 264 43.6
PSO210G5695 Papaver somniferum HOM05D006520 ORTHO05D008405 1.4e-38 164.1 265 43.0
Sopen12g001190 Solanum pennellii HOM05D006520 ORTHO05D008405 1.4e-38 164.1 265 41.1
ECA246G0715 Erigeron canadensis HOM05D006520 ORTHO05D008405 1.8e-38 163.7 260 41.5
Lalb_Chr03g0030081 Lupinus albus HOM05D006520 ORTHO05D008405 1.8e-38 163.7 258 40.3
PSO832G0135 Papaver somniferum HOM05D006520 ORTHO05D008405 1.8e-38 163.7 265 43.0
Potri.011G135600 Populus trichocarpa HOM05D006520 ORTHO05D008405 2.4e-38 163.3 262 41.6
SGA_v2.0_scaffold258G45796 Striga asiatica HOM05D006520 ORTHO05D008405 2.4e-38 163.3 266 42.1
Dinv22290 Davidia involucrata HOM05D006520 ORTHO05D008405 3.1e-38 162.9 265 42.6
Nn3g21422 Nelumbo nucifera HOM05D006520 ORTHO05D008405 3.1e-38 162.9 264 41.3
FAN21G1190 Fragaria x ananassa HOM05D006520 ORTHO05D008405 4.0e-38 162.5 264 42.4
Cfa020400 Carpinus fangiana HOM05D006520 ORTHO05D008405 5.3e-38 162.2 261 41.8
CsaV3_3G023150 Cucumis sativus L. HOM05D006520 ORTHO05D008405 5.3e-38 162.2 264 40.5
Psat7g163040 Pisum sativum HOM05D006520 ORTHO05D008405 5.3e-38 162.2 253 42.3
vmacro11755 Vaccinium macrocarpon HOM05D006520 ORTHO05D008405 5.3e-38 162.2 263 40.3
Migut.M01795 Erythranthe guttata HOM05D006520 ORTHO05D008405 6.9e-38 161.8 263 42.6
MD03G1209400 Malus domestica HOM05D006520 ORTHO05D008405 6.9e-38 161.8 264 42.0
COL.COLO4_09604 Corchorus olitorius HOM05D006520 ORTHO05D008405 9.0e-38 161.4 261 42.5
Nitab4.5_0004600g0010 Nicotiana tabacum HOM05D006520 ORTHO05D008405 9.0e-38 161.4 265 40.8
SMO169G0265 Selaginella moellendorffii HOM05D006520 ORTHO05D008405 9.0e-38 161.4 258 44.2
Ca_18859_v3 Cicer arietinum L. HOM05D006520 ORTHO05D008405 1.2e-37 161.0 257 42.0
Duzib213G0852 Durio zibethinus HOM05D006520 ORTHO05D008405 1.2e-37 161.0 263 42.6
Sc16g0006360 Simmondsia chinensis HOM05D006520 ORTHO05D008405 1.5e-37 160.6 261 41.8
RcHm_v2.0_Chr5g0037851 Rosa chinensis HOM05D006520 ORTHO05D008405 2.0e-37 160.2 264 41.3
MELO3C018098.2 Cucumis melo HOM05D006520 ORTHO05D008405 3.4e-37 159.5 264 40.2
FvH4_3g22000 Fragaria vesca HOM05D006520 ORTHO05D008405 3.4e-37 159.5 264 42.0
TAR362G1255 Trochodendron aralioides HOM05D006520 ORTHO05D008405 3.4e-37 159.5 264 41.7
FAN16G1768 Fragaria x ananassa HOM05D006520 ORTHO05D008405 4.4e-37 159.1 264 42.0
CSS0025953 Camellia sinensis var. sinensis HOM05D006520 ORTHO05D008405 7.6e-37 158.3 265 41.5
Thecc.07G046500 Theobroma cacao HOM05D006520 ORTHO05D008405 7.6e-37 158.3 261 41.8
GSVIVG01001984001 Vitis vinifera HOM05D006520 ORTHO05D008405 7.6e-37 158.3 264 40.5
Aqoxy5G00708 Aquilegia oxysepala HOM05D006520 ORTHO05D008405 9.9e-37 157.9 265 40.8
Peaxi162Scf01097g00110 Petunia axillaris HOM05D006520 ORTHO05D008405 9.9e-37 157.9 262 38.5
Hund18268 Selenicereus undatus HOM05D006520 ORTHO05D008405 9.9e-37 157.9 261 41.4
PGR083G2407 Punica granatum HOM05D006520 ORTHO05D008405 1.3e-36 157.5 266 42.1
Ah.06g182970 Amaranthus hybridus HOM05D006520 ORTHO05D008405 1.7e-36 157.1 262 42.7
Prupe.4G205700 Prunus persica HOM05D006520 ORTHO05D008405 1.7e-36 157.1 264 41.7
Sabra11G0121700 Salix brachista HOM05D006520 ORTHO05D008405 1.7e-36 157.1 294 37.4
TWI38G0825 Tripterygium wilfordii HOM05D006520 ORTHO05D008405 1.7e-36 157.1 265 40.8
Eucgr.F00972 Eucalyptus grandis HOM05D006520 ORTHO05D008405 2.2e-36 156.8 261 42.5
Medtr4g080790 Medicago truncatula HOM05D006520 ORTHO05D008405 2.2e-36 156.8 262 41.6
ATR0706G183 Amborella trichopoda HOM05D006520 ORTHO05D008405 2.9e-36 156.4 266 42.5
Sabra11G0121400 Salix brachista HOM05D006520 ORTHO05D008405 4.9e-36 155.6 294 37.1
CiPaw.11G185500 Carya illinoinensis HOM05D006520 ORTHO05D008405 8.4e-36 154.8 261 41.0
Cpa.g.sc1133.1 Carica papaya HOM05D006520 ORTHO05D008405 3.2e-35 152.9 264 42.0
Manes.15G075200 Manihot esculenta HOM05D006520 ORTHO05D008405 1.2e-34 151.0 203 47.3
Haze_09634 Corylus avellana HOM05D006520 ORTHO05D008405 3.5e-34 149.4 275 38.9
AUR62043225 Chenopodium quinoa HOM05D006520 ORTHO05D008405 4.6e-34 149.1 262 41.6
Actinidia09928 Actinidia chinensis HOM05D006520 ORTHO05D008405 6.0e-34 148.7 204 47.5
AUR62020529 Chenopodium quinoa HOM05D006520 ORTHO05D008405 1.3e-33 147.5 262 41.6
HPP92_026253 Vanilla planifolia HOM05D006520 ORTHO05D008405 1.7e-33 147.1 268 39.6
PRCOL_00001901 Prasinoderma coloniale HOM05D006520 ORTHO05D008405 4.3e-32 142.5 238 44.5
SHI31861 Sapria himalayana HOM05D006520 ORTHO05D008405 5.6e-32 142.1 259 40.5
TPR.G25908 Trifolium pratense HOM05D006520 ORTHO05D008405 7.3e-32 141.7 224 42.0
EL10Ac4g07934 Beta vulgaris HOM05D006520 ORTHO05D008405 9.6e-32 141.4 259 39.8
Cre16.g687950 Chlamydomonas reinhardtii HOM05D006520 ORTHO05D008405 6.2e-31 138.7 268 37.7
SalBow6G5624 Salvia bowleyana HOM05D006520 ORTHO05D008405 8.4e-28 128.3 237 40.5
Zm00001eb063680 Zea mays HOM05D006520 ORTHO05D008405 3.0e-25 119.8 236 38.6
CiPaw.11G185700 Carya illinoinensis HOM05D006520 ORTHO05D008405 4.0e-22 109.4 253 34.4
AagrBONN_evm.TU.Sc2ySwM_228.3593 Anthoceros agrestis HOM05D006520 ORTHO05D008405 2.9e-20 103.2 162 42.0
unitig_62.g23270 Utricularia gibba HOM05D006520 ORTHO05D008405 1.6e-18 97.4 182 37.9
CDE01G0592 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 6.0e-18 95.5 153 39.9
TAR362G0323 Trochodendron aralioides HOM05D000062 ORTHO05D000043 8.7e-17 91.7 173 38.2
Glyma.12G134400 Glycine max HOM05D006520 ORTHO05D008405 5.7e-16 89.0 140 41.4
CsaV3_3G025190 Cucumis sativus L. HOM05D006520 ORTHO05D008405 2.1e-15 87.0 169 34.9
SEGI_24363 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 3.1e-14 83.2 151 36.4
CsaV3_3G025180 Cucumis sativus L. HOM05D006520 ORTHO05D008405 1.5e-13 80.9 75 56.0
Pp3c15_18800 Physcomitrium patens HOM05D006520 ORTHO05D008405 1.5e-13 80.9 129 42.6
CsaV3_UNG094710 Cucumis sativus L. HOM05D006520 ORTHO05D008405 4.5e-13 79.3 91 50.5
arahy.Tifrunner.gnm1.ann1.3QT6IB Arachis hypogaea HOM05D006520 ORTHO05D008405 3.8e-12 76.3 98 45.9
CsaV3_UNG094720 Cucumis sativus L. HOM05D006520 ORTHO05D008405 1.1e-06 58.2 112 34.8


User provided reference genes

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