Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_26927 Corylus avellana HOM05D003318 ORTHO05D004544 0.0e+00 1090.1 581 100.0
MSTRG.23140 Avicennia marina HOM05D003318 ORTHO05D004544 5.9e-64 249.6 327 41.9
ATR1091G089 Amborella trichopoda HOM05D003318 ORTHO05D004544 5.0e-63 246.5 326 43.3
PRCOL_00005811 Prasinoderma coloniale HOM05D003318 ORTHO05D004544 6.5e-63 246.1 339 40.7
Solyc06g071550.3 Solanum lycopersicum HOM05D003318 ORTHO05D004544 4.2e-62 243.4 335 41.5
PGSC0003DMG402027084 Solanum tuberosum HOM05D003318 ORTHO05D004544 4.2e-62 243.4 337 41.2
Cc04_g12170 Coffea canephora HOM05D003318 ORTHO05D004544 9.4e-62 242.3 328 40.9
GSVIVG01007720001 Vitis vinifera HOM05D003318 ORTHO05D004544 9.4e-62 242.3 332 41.0
CAN.G2085.3 Capsicum annuum HOM05D003318 ORTHO05D004544 1.2e-61 241.9 337 40.7
Migut.O00115 Erythranthe guttata HOM05D003318 ORTHO05D004544 1.2e-61 241.9 329 41.0
RcHm_v2.0_Chr7g0193331 Rosa chinensis HOM05D003318 ORTHO05D004544 1.6e-61 241.5 378 39.2
AL6G29090 Arabidopsis lyrata HOM05D003318 ORTHO05D004544 2.7e-61 240.7 359 40.7
MSTRG.11467 Avicennia marina HOM05D003318 ORTHO05D004544 2.7e-61 240.7 329 41.0
Prupe.5G171400 Prunus persica HOM05D003318 ORTHO05D004544 2.7e-61 240.7 368 39.4
Sopen06g027840 Solanum pennellii HOM05D003318 ORTHO05D004544 2.7e-61 240.7 337 40.7
Actinidia33079 Actinidia chinensis HOM05D003318 ORTHO05D004544 3.6e-61 240.4 338 40.8
FAN18G0002 Fragaria x ananassa HOM05D003318 ORTHO05D004544 4.7e-61 240.0 378 39.2
MBI16_g39220_MAGBIO Magnolia biondii HOM05D003318 ORTHO05D004544 4.7e-61 240.0 327 41.3
MD14G1177900 Malus domestica HOM05D003318 ORTHO05D004544 4.7e-61 240.0 370 38.4
CANSAT80G1582 Cannabis sativa HOM05D003318 ORTHO05D004544 6.1e-61 239.6 332 40.7
Peaxi162Scf00689g00118 Petunia axillaris HOM05D003318 ORTHO05D004544 6.1e-61 239.6 336 40.8
RcHm_v2.0_Chr6g0263071 Rosa chinensis HOM05D003318 ORTHO05D004544 6.1e-61 239.6 378 38.6
SalBow5G2274 Salvia bowleyana HOM05D003318 ORTHO05D004544 6.1e-61 239.6 329 41.0
Ca_16165_v3 Cicer arietinum L. HOM05D003318 ORTHO05D004544 1.0e-60 238.8 328 41.8
MD06G1172000 Malus domestica HOM05D003318 ORTHO05D004544 1.0e-60 238.8 327 41.3
Aa31LG11G11520 Aethionema arabicum HOM05D003318 ORTHO05D004544 1.4e-60 238.4 336 40.8
Dinv38569 Davidia involucrata HOM05D003318 ORTHO05D004544 1.8e-60 238.0 337 40.1
CSS0041520 Camellia sinensis var. sinensis HOM05D003318 ORTHO05D004544 3.0e-60 237.3 338 39.9
CARHR195080 Cardamine hirsuta HOM05D003318 ORTHO05D004544 3.0e-60 237.3 308 44.2
AT5G17990 Arabidopsis thaliana HOM05D003318 ORTHO05D004544 3.9e-60 236.9 387 38.8
FvH4_5g05490 Fragaria vesca HOM05D003318 ORTHO05D004544 3.9e-60 236.9 378 37.8
Psat0ss3962g0480 Pisum sativum HOM05D003318 ORTHO05D004544 3.9e-60 236.9 385 37.4
TAR622G0444 Trochodendron aralioides HOM05D003318 ORTHO05D004544 3.9e-60 236.9 345 40.6
CsaV3_1G008610 Cucumis sativus L. HOM05D003318 ORTHO05D004544 5.2e-60 236.5 314 41.1
Dinv33471 Davidia involucrata HOM05D003318 ORTHO05D004544 5.2e-60 236.5 342 40.4
PSO478G3254 Papaver somniferum HOM05D003318 ORTHO05D004544 5.2e-60 236.5 341 40.5
QL11p012704 Quercus lobata HOM05D003318 ORTHO05D004544 5.2e-60 236.5 341 38.7
HPP92_007429 Vanilla planifolia HOM05D003318 ORTHO05D004544 5.2e-60 236.5 337 39.8
Oeu023437.2 Olea europaea HOM05D003318 ORTHO05D004544 6.7e-60 236.1 321 40.8
CAN.G1166.8 Capsicum annuum HOM05D003318 ORTHO05D004544 8.8e-60 235.7 337 40.4
FAN04G1614 Fragaria x ananassa HOM05D003318 ORTHO05D004544 8.8e-60 235.7 378 37.6
Lj1g0000906 Lotus japonicus HOM05D003318 ORTHO05D004544 8.8e-60 235.7 328 40.2
Cfa019154 Carpinus fangiana HOM05D003318 ORTHO05D004544 1.1e-59 235.3 331 39.3
QL08p043380 Quercus lobata HOM05D003318 ORTHO05D004544 1.1e-59 235.3 341 38.1
Dinv20635 Davidia involucrata HOM05D003318 ORTHO05D004544 1.5e-59 235.0 337 39.2
Lsat_1_v5_gn_1_28341 Lactuca sativa HOM05D003318 ORTHO05D004544 1.5e-59 235.0 319 41.1
Nitab4.5_0000003g0690 Nicotiana tabacum HOM05D003318 ORTHO05D004544 1.5e-59 235.0 342 40.1
Hund02756 Selenicereus undatus HOM05D003318 ORTHO05D004544 1.5e-59 235.0 374 38.5
ECA247G3283 Erigeron canadensis HOM05D003318 ORTHO05D004544 2.0e-59 234.6 327 40.1
MELO3C002275.2 Cucumis melo HOM05D003318 ORTHO05D004544 2.6e-59 234.2 304 42.1
Hma1.2p1_2568F.1_g324540 Hydrangea macrophylla HOM05D003318 ORTHO05D004544 2.6e-59 234.2 335 39.4
Mapoly0027s0124 Marchantia polymorpha HOM05D003318 ORTHO05D004544 2.6e-59 234.2 360 38.6
Pp3c17_16690 Physcomitrium patens HOM05D003318 ORTHO05D004544 2.6e-59 234.2 346 37.6
Potri.012G082700 Populus trichocarpa HOM05D003318 ORTHO05D004544 2.6e-59 234.2 335 40.0
Rhsim08G0174000 Rhododendron simsii HOM05D003318 ORTHO05D004544 2.6e-59 234.2 411 36.7
Ciclev10020016m.g Citrus clementina HOM05D003318 ORTHO05D004544 3.3e-59 233.8 319 42.6
Lsat_1_v5_gn_4_183240 Lactuca sativa HOM05D003318 ORTHO05D004544 3.3e-59 233.8 328 40.5
PGR083G1815 Punica granatum HOM05D003318 ORTHO05D004544 3.3e-59 233.8 327 40.4
Eucgr.B00293 Eucalyptus grandis HOM05D003318 ORTHO05D004544 4.4e-59 233.4 377 37.9
Thhalv10013530m.g Eutrema salsugineum HOM05D003318 ORTHO05D004544 4.4e-59 233.4 361 38.5
HanXRQChr09g0251391 Helianthus annuus HOM05D003318 ORTHO05D004544 4.4e-59 233.4 319 40.8
PSO017G3133 Papaver somniferum HOM05D003318 ORTHO05D004544 4.4e-59 233.4 341 39.9
TAR629G1623 Trochodendron aralioides HOM05D003318 ORTHO05D004544 4.4e-59 233.4 338 40.2
BcaC04g18737 Brassica carinata HOM05D003318 ORTHO05D004544 5.7e-59 233.0 358 38.8
C09p59000 Brassica napus HOM05D003318 ORTHO05D004544 5.7e-59 233.0 358 38.8
BolC9t58746H Brassica oleracea HOM05D003318 ORTHO05D004544 5.7e-59 233.0 358 38.8
Sp6g26300 Schrenkiella parvula HOM05D003318 ORTHO05D004544 5.7e-59 233.0 336 39.9
Carub.0006s1618 Capsella rubella HOM05D003318 ORTHO05D004544 7.4e-59 232.6 380 38.4
FAN18G0175 Fragaria x ananassa HOM05D003318 ORTHO05D004544 7.4e-59 232.6 378 37.3
Lj5A126T76 Lonicera japonica HOM05D003318 ORTHO05D004544 7.4e-59 232.6 329 40.4
Lalb_Chr08g0236611 Lupinus albus HOM05D003318 ORTHO05D004544 7.4e-59 232.6 320 40.9
arahy.Tifrunner.gnm1.ann1.XU68ZZ Arachis hypogaea HOM05D003318 ORTHO05D004544 9.7e-59 232.3 329 40.4
Thecc.03G014800 Theobroma cacao HOM05D003318 ORTHO05D004544 9.7e-59 232.3 338 38.8
A10p21530 Brassica napus HOM05D003318 ORTHO05D004544 1.3e-58 231.9 335 39.7
DCAR_016479 Daucus carota HOM05D003318 ORTHO05D004544 1.3e-58 231.9 345 38.6
Hma1.2p1_0993F.1_g245293 Hydrangea macrophylla HOM05D003318 ORTHO05D004544 1.3e-58 231.9 339 39.8
Hma1.2p1_0999F.1_g246340 Hydrangea macrophylla HOM05D003318 ORTHO05D004544 1.3e-58 231.9 339 39.8
Sopen12g014750 Solanum pennellii HOM05D003318 ORTHO05D004544 1.3e-58 231.9 319 42.3
Aqoxy3G01070 Aquilegia oxysepala HOM05D003318 ORTHO05D004544 1.7e-58 231.5 331 40.5
arahy.Tifrunner.gnm1.ann1.GNW9LV Arachis hypogaea HOM05D003318 ORTHO05D004544 1.7e-58 231.5 329 40.1
Sed0002340 Sechium edule HOM05D003318 ORTHO05D004544 1.7e-58 231.5 382 36.9
Solyc12g035190.2 Solanum lycopersicum HOM05D003318 ORTHO05D004544 1.7e-58 231.5 335 40.3
vmacro19403 Vaccinium macrocarpon HOM05D003318 ORTHO05D004544 1.7e-58 231.5 330 40.9
BcaB08g36721 Brassica carinata HOM05D003318 ORTHO05D004544 2.2e-58 231.1 363 38.3
TAR374G0007 Trochodendron aralioides HOM05D003318 ORTHO05D004544 2.2e-58 231.1 335 40.0
GSVIVG01032439001 Vitis vinifera HOM05D003318 ORTHO05D004544 2.2e-58 231.1 304 42.1
BraA10t44214Z Brassica rapa HOM05D003318 ORTHO05D004544 2.8e-58 230.7 355 38.3
ClCG01G013250 Citrullus lanatus HOM05D003318 ORTHO05D004544 2.8e-58 230.7 351 37.9
Ah.02g110590 Amaranthus hybridus HOM05D003318 ORTHO05D004544 3.7e-58 230.3 304 41.8
Sabra15G0103300 Salix brachista HOM05D003318 ORTHO05D004544 3.7e-58 230.3 346 38.2
PGSC0003DMG400031392 Solanum tuberosum HOM05D003318 ORTHO05D004544 3.7e-58 230.3 318 42.1
Nitab4.5_0006198g0010 Nicotiana tabacum HOM05D003318 ORTHO05D004544 8.2e-58 229.2 352 39.2
A02p04620 Brassica napus HOM05D003318 ORTHO05D004544 1.1e-57 228.8 342 39.8
VMungo1309G2893 Vigna mungo HOM05D003318 ORTHO05D004544 1.1e-57 228.8 344 37.8
Haze_07523 Corylus avellana HOM05D003318 ORTHO05D004544 1.4e-57 228.4 331 38.7
Migut.H00094 Erythranthe guttata HOM05D003318 ORTHO05D004544 1.4e-57 228.4 318 41.2
SHI00282 Sapria himalayana HOM05D003318 ORTHO05D004544 1.4e-57 228.4 332 38.9
SMO353G0193 Selaginella moellendorffii HOM05D003318 ORTHO05D004544 1.4e-57 228.4 380 38.2
THA.LOC104820782 Tarenaya hassleriana HOM05D003318 ORTHO05D004544 1.4e-57 228.4 340 38.5
Gohir.D12G275900 Gossypium hirsutum HOM05D003318 ORTHO05D004544 1.8e-57 228.0 342 38.3
HanXRQChr09g0254931 Helianthus annuus HOM05D003318 ORTHO05D004544 1.8e-57 228.0 346 39.0
Zm00001eb403640 Zea mays HOM05D003318 ORTHO05D004544 1.8e-57 228.0 381 38.3
Sed0012780 Sechium edule HOM05D003318 ORTHO05D004544 2.4e-57 227.6 355 38.0
C02p09560 Brassica napus HOM05D003318 ORTHO05D004544 3.1e-57 227.3 384 37.5
Gohir.A12G275200 Gossypium hirsutum HOM05D003318 ORTHO05D004544 3.1e-57 227.3 342 38.6
SGA_v2.0_scaffold116G32230 Striga asiatica HOM05D003318 ORTHO05D004544 3.1e-57 227.3 367 38.4
Manes.06G106300 Manihot esculenta HOM05D003318 ORTHO05D004544 4.1e-57 226.9 331 39.6
Gorai.008G296400 Gossypium raimondii HOM05D003318 ORTHO05D004544 5.3e-57 226.5 342 38.3
Nn4g22710 Nelumbo nucifera HOM05D003318 ORTHO05D004544 5.3e-57 226.5 365 37.8
TWI14G1066 Tripterygium wilfordii HOM05D003318 ORTHO05D004544 5.3e-57 226.5 338 38.8
BcaC03g13562 Brassica carinata HOM05D003318 ORTHO05D004544 7.0e-57 226.1 384 37.2
Nitab4.5_0001659g0170 Nicotiana tabacum HOM05D003318 ORTHO05D004544 7.0e-57 226.1 345 38.8
vmacro05848 Vaccinium macrocarpon HOM05D003318 ORTHO05D004544 7.0e-57 226.1 374 37.4
CiPaw.11G024300 Carya illinoinensis HOM05D003318 ORTHO05D004544 9.1e-57 225.7 306 40.5
CiPaw.12G028100 Carya illinoinensis HOM05D003318 ORTHO05D004544 9.1e-57 225.7 301 40.9
Cc07_g01950 Coffea canephora HOM05D003318 ORTHO05D004544 9.1e-57 225.7 347 38.6
DCAR_021707 Daucus carota HOM05D003318 ORTHO05D004544 9.1e-57 225.7 361 39.3
BraA02t05423Z Brassica rapa HOM05D003318 ORTHO05D004544 1.2e-56 225.3 388 37.6
MBI10_g27994_MAGBIO Magnolia biondii HOM05D003318 ORTHO05D004544 2.0e-56 224.6 343 39.4
Peaxi162Scf00700g00534 Petunia axillaris HOM05D003318 ORTHO05D004544 2.0e-56 224.6 350 39.7
Nn3g16817 Nelumbo nucifera HOM05D003318 ORTHO05D004544 2.6e-56 224.2 304 41.4
Atru.chr9.2499 Acer truncatum HOM05D003318 ORTHO05D004544 3.5e-56 223.8 321 41.7
BolC2t06863H Brassica oleracea HOM05D003318 ORTHO05D004544 4.5e-56 223.4 384 37.2
Cre10.g429150 Chlamydomonas reinhardtii HOM05D003318 ORTHO05D004544 4.5e-56 223.4 335 40.3
unitig_61.g26476 Utricularia gibba HOM05D003318 ORTHO05D004544 4.5e-56 223.4 329 39.2
BcaB05g23318 Brassica carinata HOM05D003318 ORTHO05D004544 5.9e-56 223.0 328 40.5
Actinidia36099 Actinidia chinensis HOM05D003318 ORTHO05D004544 1.3e-55 221.9 342 39.2
SGA_v2.0_scaffold481G52331 Striga asiatica HOM05D003318 ORTHO05D004544 1.3e-55 221.9 332 39.5
Os03g0126000 Oryza sativa ssp. japonica HOM05D003318 ORTHO05D004544 2.2e-55 221.1 314 40.4
Dinv35091 Davidia involucrata HOM05D003318 ORTHO05D004544 2.9e-55 220.7 343 38.5
Oeu016410.1 Olea europaea HOM05D003318 ORTHO05D004544 3.8e-55 220.3 363 37.7
Phvul.009G177200 Phaseolus vulgaris HOM05D003318 ORTHO05D004544 3.8e-55 220.3 339 36.9
Glyma.04G184900 Glycine max HOM05D003318 ORTHO05D004544 2.5e-54 217.6 355 37.2
CDE06G1481 Ceratophyllum demersum HOM05D003318 ORTHO05D004544 4.2e-54 216.9 266 44.4
MSTRG.24028 Avicennia marina HOM05D003318 ORTHO05D004544 5.5e-54 216.5 311 39.9
Sabra12G0059400 Salix brachista HOM05D003318 ORTHO05D004544 1.2e-53 215.3 287 42.5
Sc04g0001710 Simmondsia chinensis HOM05D003318 ORTHO05D004544 1.6e-53 214.9 282 43.3
COL.COLO4_30076 Corchorus olitorius HOM05D003318 ORTHO05D004544 2.1e-53 214.5 272 42.3
ECA232G1375 Erigeron canadensis HOM05D003318 ORTHO05D004544 2.1e-53 214.5 280 43.2
Medtr3g077590 Medicago truncatula HOM05D003318 ORTHO05D004544 2.7e-53 214.2 320 37.8
Aa31LG5G14350 Aethionema arabicum HOM05D003318 ORTHO05D004544 1.0e-52 212.2 324 39.2
Lj7A595G62 Lonicera japonica HOM05D003318 ORTHO05D004544 5.2e-52 209.9 361 36.3
AUR62008192 Chenopodium quinoa HOM05D003318 ORTHO05D004544 2.0e-51 208.0 338 36.1
Rhsim10G0019100 Rhododendron simsii HOM05D003318 ORTHO05D004544 2.0e-51 208.0 322 38.5
SalBow1G7854 Salvia bowleyana HOM05D003318 ORTHO05D004544 4.4e-51 206.8 346 37.3
AUR62030944 Chenopodium quinoa HOM05D003318 ORTHO05D004544 1.7e-50 204.9 369 35.2
SGA_v2.0_scaffold90G27893 Striga asiatica HOM05D003318 ORTHO05D004544 5.5e-46 189.9 364 35.4
EL10Ac5g10728 Beta vulgaris HOM05D003318 ORTHO05D004544 7.2e-46 189.5 322 37.0
Aqoxy1G03320 Aquilegia oxysepala HOM05D003318 ORTHO05D004544 4.0e-44 183.7 331 34.7
Nitab4.5_0002643g0020 Nicotiana tabacum HOM05D003318 ORTHO05D004544 5.2e-44 183.3 334 38.3
AagrBONN_evm.TU.Sc2ySwM_362.2078 Anthoceros agrestis HOM05D003318 ORTHO05D004544 2.6e-43 181.0 366 35.2
RcHm_v2.0_Chr6g0263081 Rosa chinensis HOM05D003318 ORTHO05D004544 9.1e-41 172.6 179 48.6
Nitab4.5_0002306g0030 Nicotiana tabacum HOM05D003318 ORTHO05D004544 1.3e-39 168.7 357 34.5
Aqoxy248s001 Aquilegia oxysepala HOM05D003318 ORTHO05D004544 3.3e-38 164.1 253 37.9
RcHm_v2.0_Chr6g0263061 Rosa chinensis HOM05D003318 ORTHO05D004544 4.2e-38 163.7 164 51.2
Duzib205G1868 Durio zibethinus HOM05D003318 ORTHO05D004544 1.2e-37 162.2 215 41.4
Cfa026557 Carpinus fangiana HOM05D003318 ORTHO05D125285 1.2e-35 155.6 354 33.9
Cpa.g.sc928.1 Carica papaya HOM05D003318 ORTHO05D004544 3.2e-33 147.5 192 42.7
FAN02G4038 Fragaria x ananassa HOM05D003318 ORTHO05D004544 7.8e-32 142.9 186 41.4
Hma1.2p1_0592F.1_g185485 Hydrangea macrophylla HOM05D003318 ORTHO05D004544 1.3e-31 142.1 327 32.4
MBI10_g40111_MAGBIO Magnolia biondii HOM05D003318 ORTHO05D004544 2.9e-31 141.0 332 31.9
CDE07G1695 Ceratophyllum demersum HOM05D003318 ORTHO05D004544 8.6e-31 139.4 352 31.2
SEGI_31346 Sequoiadendron giganteum HOM05D003318 ORTHO05D004544 7.3e-30 136.3 128 53.1
TPR.G25990 Trifolium pratense HOM05D003318 ORTHO05D004544 2.0e-27 128.3 200 36.5
MCO09G499 Micromonas commoda HOM05D003318 ORTHO05D004544 5.8e-27 126.7 193 38.3
Cfa019115 Carpinus fangiana HOM05D003318 ORTHO05D004544 2.6e-19 101.3 120 48.3
Ah.11g051490 Amaranthus hybridus HOM05D003318 ORTHO05D004544 7.5e-19 99.8 171 39.2
Manes.14G064001 Manihot esculenta HOM05D003318 ORTHO05D004544 7.1e-17 93.2 289 29.8
Actinidia19331 Actinidia chinensis HOM05D003318 ORTHO05D004544 1.6e-16 92.0 156 35.9
SEGI_28385 Sequoiadendron giganteum HOM05D003318 ORTHO05D004544 3.3e-14 84.3 133 36.8
PGSC0003DMG400018097 Solanum tuberosum HOM05D003318 ORTHO05D009063 3.3e-14 84.3 93 43.0
MBI02_g17816_MAGBIO Magnolia biondii HOM05D003318 ORTHO05D011024 8.1e-13 79.7 129 38.8
FAN14G3301 Fragaria x ananassa HOM05D003318 ORTHO05D004544 5.2e-12 77.0 152 29.6
Cpa.g.c44999 Carica papaya HOM05D003318 ORTHO05D004544 8.9e-12 76.3 104 40.4
BcaB04g17330 Brassica carinata HOM05D003318 ORTHO05D011024 1.2e-11 75.9 84 53.6
Nitab4.5_0000118g0210 Nicotiana tabacum HOM05D003318 ORTHO05D004544 3.4e-11 74.3 98 40.8
MBI06_g10737_MAGBIO Magnolia biondii HOM05D003318 ORTHO05D011024 1.4e-09 68.9 72 51.4
MBI16_g01186_MAGBIO Magnolia biondii HOM05D003318 ORTHO05D011024 2.4e-09 68.2 112 39.3
EL10Ac8g19201 Beta vulgaris HOM05D003318 ORTHO05D011024 3.2e-09 67.8 101 40.6
MBI06_g16692_MAGBIO Magnolia biondii HOM05D003318 ORTHO05D008292 7.1e-09 66.6 154 33.1
AL3G45680 Arabidopsis lyrata HOM05D003318 ORTHO05D004544 3.5e-08 64.3 129 34.1
CARHR154460 Cardamine hirsuta HOM05D003318 ORTHO05D011024 6.0e-08 63.5 77 45.5


User provided reference genes

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