Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_26802 Corylus avellana HOM05D003263 ORTHO05D004801 0.0e+00 1595.5 801 100.0
Pp3c19_19270 Physcomitrium patens HOM05D003263 ORTHO05D004801 1.7e-183 647.1 790 46.2
SMO331G0029 Selaginella moellendorffii HOM05D003263 ORTHO05D004801 8.7e-183 644.8 708 48.4
Pp3c1_34140 Physcomitrium patens HOM05D003263 ORTHO05D004801 1.9e-182 643.7 782 46.3
Pp3c1_34100 Physcomitrium patens HOM05D003263 ORTHO05D004801 3.3e-182 642.9 782 46.3
Pp3c1_34110 Physcomitrium patens HOM05D003263 ORTHO05D004801 3.3e-182 642.9 782 46.3
Cfa025667 Carpinus fangiana HOM05D003263 ORTHO05D004801 4.8e-181 639.0 701 49.1
CBR_g6354 Chara braunii HOM05D003263 ORTHO05D004801 6.9e-180 635.2 710 48.0
Ah.10g032470 Amaranthus hybridus HOM05D003263 ORTHO05D004801 1.5e-179 634.0 702 48.1
Mapoly0153s0030 Marchantia polymorpha HOM05D003263 ORTHO05D004801 2.0e-179 633.6 704 48.7
Ah.10g032480 Amaranthus hybridus HOM05D003263 ORTHO05D004801 3.4e-179 632.9 708 47.9
ECA238G3173 Erigeron canadensis HOM05D003263 ORTHO05D004801 5.8e-179 632.1 755 46.2
MCO08G340 Micromonas commoda HOM05D003263 ORTHO05D004801 5.8e-179 632.1 712 47.5
Hund13092 Selenicereus undatus HOM05D003263 ORTHO05D004801 7.6e-179 631.7 710 47.3
Cre12.g535950 Chlamydomonas reinhardtii HOM05D003263 ORTHO05D004801 9.9e-179 631.3 752 46.8
Prupe.3G165400 Prunus persica HOM05D003263 ORTHO05D004801 2.9e-178 629.8 710 47.6
HanXRQChr14g0444641 Helianthus annuus HOM05D003263 ORTHO05D004801 6.4e-178 628.6 710 46.9
EL10Ac2g03207 Beta vulgaris HOM05D003263 ORTHO05D004801 1.1e-177 627.9 706 47.2
AUR62037782 Chenopodium quinoa HOM05D003263 ORTHO05D004801 4.2e-177 625.9 706 46.7
MD17G1267300 Malus domestica HOM05D003263 ORTHO05D004801 4.2e-177 625.9 710 47.3
HanXRQChr07g0191741 Helianthus annuus HOM05D003263 ORTHO05D004801 7.1e-177 625.2 712 46.8
DCAR_014159 Daucus carota HOM05D003263 ORTHO05D004801 1.6e-176 624.0 708 47.5
CSS0018871 Camellia sinensis var. sinensis HOM05D003263 ORTHO05D004801 2.7e-176 623.2 702 47.6
CiPaw.03G074100 Carya illinoinensis HOM05D003263 ORTHO05D004801 2.7e-176 623.2 739 46.0
Ciclev10019002m.g Citrus clementina HOM05D003263 ORTHO05D004801 2.7e-176 623.2 749 46.1
Duzib138G0925 Durio zibethinus HOM05D003263 ORTHO05D004801 2.7e-176 623.2 708 47.2
RcHm_v2.0_Chr3g0491991 Rosa chinensis HOM05D003263 ORTHO05D004801 2.7e-176 623.2 701 47.1
Duzib133G1400 Durio zibethinus HOM05D003263 ORTHO05D004801 3.5e-176 622.9 710 46.5
Potri.004G082800 Populus trichocarpa HOM05D003263 ORTHO05D004801 4.6e-176 622.5 702 47.9
FAN23G0774 Fragaria x ananassa HOM05D003263 ORTHO05D004801 7.9e-176 621.7 754 45.1
MD09G1268900 Malus domestica HOM05D003263 ORTHO05D004801 7.9e-176 621.7 710 47.2
AagrBONN_evm.TU.Sc2ySwM_228.2430 Anthoceros agrestis HOM05D003263 ORTHO05D004801 1.0e-175 621.3 700 48.0
Peaxi162Scf00464g00325 Petunia axillaris HOM05D003263 ORTHO05D004801 2.3e-175 620.2 758 45.4
COL.COLO4_13315 Corchorus olitorius HOM05D003263 ORTHO05D004801 3.0e-175 619.8 702 47.4
Gohir.A07G176600 Gossypium hirsutum HOM05D003263 ORTHO05D004801 3.0e-175 619.8 702 47.6
Gorai.001G197100 Gossypium raimondii HOM05D003263 ORTHO05D004801 3.0e-175 619.8 705 47.1
FvH4_1g30070 Fragaria vesca HOM05D003263 ORTHO05D004801 3.9e-175 619.4 752 45.1
Lj6g0025109 Lotus japonicus HOM05D003263 ORTHO05D004801 3.9e-175 619.4 733 45.7
TWI74G0116 Tripterygium wilfordii HOM05D003263 ORTHO05D004801 3.9e-175 619.4 746 46.8
Actinidia35722 Actinidia chinensis HOM05D003263 ORTHO05D004801 5.1e-175 619.0 757 45.2
Lsat_1_v5_gn_3_63961 Lactuca sativa HOM05D003263 ORTHO05D004801 5.1e-175 619.0 704 46.7
QL02p059434 Quercus lobata HOM05D003263 ORTHO05D004801 5.1e-175 619.0 703 47.4
MELO3C020331.2 Cucumis melo HOM05D003263 ORTHO05D004801 6.7e-175 618.6 709 46.5
CsaV3_3G017880 Cucumis sativus L. HOM05D003263 ORTHO05D004801 6.7e-175 618.6 709 46.8
Cpa.g.sc116.77 Carica papaya HOM05D003263 ORTHO05D004801 8.7e-175 618.2 763 44.7
Dinv19049 Davidia involucrata HOM05D003263 ORTHO05D004801 1.1e-174 617.8 709 47.8
Potri.017G136133 Populus trichocarpa HOM05D003263 ORTHO05D004801 1.1e-174 617.8 708 47.0
TAR629G0765 Trochodendron aralioides HOM05D003263 ORTHO05D004801 1.1e-174 617.8 702 47.3
Sed0005557 Sechium edule HOM05D003263 ORTHO05D004801 1.5e-174 617.5 734 46.0
CAN.G222.62 Capsicum annuum HOM05D003263 ORTHO05D004801 1.9e-174 617.1 708 46.8
FAN26G0816 Fragaria x ananassa HOM05D003263 ORTHO05D004801 1.9e-174 617.1 748 45.1
Lalb_Chr18g0053541 Lupinus albus HOM05D003263 ORTHO05D004801 1.9e-174 617.1 704 46.7
ATR0118G003 Amborella trichopoda HOM05D003263 ORTHO05D004801 2.5e-174 616.7 758 46.0
ClCG05G010610 Citrullus lanatus HOM05D003263 ORTHO05D004801 2.5e-174 616.7 709 46.7
FAN19G0316 Fragaria x ananassa HOM05D003263 ORTHO05D004801 2.5e-174 616.7 752 45.1
Nitab4.5_0011135g0010 Nicotiana tabacum HOM05D003263 ORTHO05D004801 2.5e-174 616.7 706 47.2
Solyc11g011470.2 Solanum lycopersicum HOM05D003263 ORTHO05D004801 2.5e-174 616.7 706 46.2
CANSAT56G4352 Cannabis sativa HOM05D003263 ORTHO05D004801 3.3e-174 616.3 751 45.8
Gohir.D07G183900 Gossypium hirsutum HOM05D003263 ORTHO05D004801 3.3e-174 616.3 732 46.3
Manes.02G078500 Manihot esculenta HOM05D003263 ORTHO05D004801 4.3e-174 615.9 745 45.6
Atru.chr1.2038 Acer truncatum HOM05D003263 ORTHO05D004801 5.6e-174 615.5 708 46.5
Zm00001eb055050 Zea mays HOM05D003263 ORTHO05D004801 5.6e-174 615.5 703 47.2
Glyma.11G214800 Glycine max HOM05D003263 ORTHO05D004801 7.4e-174 615.1 731 45.6
Sed0016313 Sechium edule HOM05D003263 ORTHO05D004801 7.4e-174 615.1 731 46.4
Gorai.001G204300 Gossypium raimondii HOM05D003263 ORTHO05D004801 9.6e-174 614.8 702 47.4
Haze_14285 Corylus avellana HOM05D003263 ORTHO05D004801 1.3e-173 614.4 732 46.2
TWI77G0544 Tripterygium wilfordii HOM05D003263 ORTHO05D004801 1.3e-173 614.4 703 47.2
VMungo1383G2082 Vigna mungo HOM05D003263 ORTHO05D004801 1.3e-173 614.4 704 46.4
SHI30113 Sapria himalayana HOM05D003263 ORTHO05D004801 1.6e-173 614.0 718 46.8
Sopen11g006260 Solanum pennellii HOM05D003263 ORTHO05D004801 2.1e-173 613.6 755 44.0
PGSC0003DMG400013309 Solanum tuberosum HOM05D003263 ORTHO05D004801 2.1e-173 613.6 755 44.1
arahy.Tifrunner.gnm1.ann1.AUXW6G Arachis hypogaea HOM05D003263 ORTHO05D004801 2.8e-173 613.2 754 44.7
Medtr3g065130 Medicago truncatula HOM05D003263 ORTHO05D004801 2.8e-173 613.2 732 45.2
Thecc.04G063600 Theobroma cacao HOM05D003263 ORTHO05D004801 2.8e-173 613.2 732 46.0
Aqoxy3G04075 Aquilegia oxysepala HOM05D003263 ORTHO05D004801 4.8e-173 612.5 704 47.2
Sc14g0006900 Simmondsia chinensis HOM05D003263 ORTHO05D004801 6.2e-173 612.1 702 46.7
Psat5g119880 Pisum sativum HOM05D003263 ORTHO05D004801 8.1e-173 611.7 732 45.1
HPP92_020298 Vanilla planifolia HOM05D003263 ORTHO05D004801 8.1e-173 611.7 755 45.8
Glyma.18G041700 Glycine max HOM05D003263 ORTHO05D004801 1.1e-172 611.3 703 46.1
SalBow5G3125 Salvia bowleyana HOM05D003263 ORTHO05D004801 1.4e-172 610.9 705 46.2
Cfa007786 Carpinus fangiana HOM05D003263 ORTHO05D004801 1.8e-172 610.5 704 46.9
SGA_v2.0_scaffold2G00947 Striga asiatica HOM05D003263 ORTHO05D004801 1.8e-172 610.5 711 46.4
Migut.H02232 Erythranthe guttata HOM05D003263 ORTHO05D004801 2.4e-172 610.1 756 44.8
Zm00001eb216210 Zea mays HOM05D003263 ORTHO05D004801 2.4e-172 610.1 703 46.9
Phvul.001G229000 Phaseolus vulgaris HOM05D003263 ORTHO05D004801 3.1e-172 609.8 753 44.4
MSTRG.3699 Avicennia marina HOM05D003263 ORTHO05D004801 4.0e-172 609.4 705 46.0
CDE05G1320 Ceratophyllum demersum HOM05D003263 ORTHO05D004801 5.3e-172 609.0 703 47.1
Cc07_g13220 Coffea canephora HOM05D003263 ORTHO05D004801 5.3e-172 609.0 694 47.0
Gohir.A07G170100 Gossypium hirsutum HOM05D003263 ORTHO05D004801 6.9e-172 608.6 689 47.6
Gohir.D07G176300 Gossypium hirsutum HOM05D003263 ORTHO05D004801 6.9e-172 608.6 687 47.6
Os03g0713400 Oryza sativa ssp. japonica HOM05D003263 ORTHO05D004801 6.9e-172 608.6 735 45.7
MSTRG.15657 Avicennia marina HOM05D003263 ORTHO05D004801 2.6e-171 606.7 760 43.7
PGR042G3530 Punica granatum HOM05D003263 ORTHO05D004801 3.4e-171 606.3 704 47.6
Migut.K00926 Erythranthe guttata HOM05D003263 ORTHO05D004801 5.8e-171 605.5 754 45.1
Eucgr.J01621 Eucalyptus grandis HOM05D003263 ORTHO05D004801 9.9e-171 604.7 704 46.4
AL1G43210 Arabidopsis lyrata HOM05D003263 ORTHO05D004801 3.8e-170 602.8 706 45.3
unitig_748.g8633 Utricularia gibba HOM05D003263 ORTHO05D004801 3.8e-170 602.8 708 46.6
BcaB06g27086 Brassica carinata HOM05D003263 ORTHO05D004801 4.9e-170 602.4 700 45.4
Ca_17086_v3 Cicer arietinum L. HOM05D003263 ORTHO05D004801 4.9e-170 602.4 739 44.7
A04p10660 Brassica napus HOM05D003263 ORTHO05D004801 1.1e-169 601.3 700 45.4
PSO478G1645 Papaver somniferum HOM05D003263 ORTHO05D004801 1.1e-169 601.3 718 46.4
THA.LOC104805635 Tarenaya hassleriana HOM05D003263 ORTHO05D004801 1.1e-169 601.3 702 46.4
C04p44380 Brassica napus HOM05D003263 ORTHO05D004801 1.9e-169 600.5 702 45.3
BcaC02g09578 Brassica carinata HOM05D003263 ORTHO05D004801 2.4e-169 600.1 702 45.4
BolC4t26009H Brassica oleracea HOM05D003263 ORTHO05D004801 2.4e-169 600.1 702 45.4
BraA04t16733Z Brassica rapa HOM05D003263 ORTHO05D004801 3.2e-169 599.7 702 45.3
PSO017G4553 Papaver somniferum HOM05D003263 ORTHO05D004801 3.2e-169 599.7 718 46.2
TPR.G23206 Trifolium pratense HOM05D003263 ORTHO05D004801 9.3e-169 598.2 732 44.5
Thhalv10027640m.g Eutrema salsugineum HOM05D003263 ORTHO05D004801 1.6e-168 597.4 700 45.0
CARHR215400 Cardamine hirsuta HOM05D003263 ORTHO05D004801 3.5e-168 596.3 700 44.9
Manes.01G120700 Manihot esculenta HOM05D003263 ORTHO05D004801 3.5e-168 596.3 744 44.9
Aa31LG9G17530 Aethionema arabicum HOM05D003263 ORTHO05D004801 7.9e-168 595.1 744 44.1
AT5G37510 Arabidopsis thaliana HOM05D003263 ORTHO05D004801 7.9e-168 595.1 751 43.1
THA.LOC104822242 Tarenaya hassleriana HOM05D003263 ORTHO05D004801 1.0e-167 594.7 700 45.9
Carub.0007s3268 Capsella rubella HOM05D003263 ORTHO05D004801 8.7e-167 591.7 700 44.1
Aa31LG9G17520 Aethionema arabicum HOM05D003263 ORTHO05D004801 1.1e-166 591.3 706 44.8
Rhsim08G0019700 Rhododendron simsii HOM05D003263 ORTHO05D004801 4.3e-166 589.3 754 43.9
Oeu030292.1 Olea europaea HOM05D003263 ORTHO05D004801 9.6e-166 588.2 737 43.6
PRCOL_00000346 Prasinoderma coloniale HOM05D003263 ORTHO05D004801 1.3e-165 587.8 709 46.3
GSVIVG01030914001 Vitis vinifera HOM05D003263 ORTHO05D004801 2.4e-164 583.6 680 47.2
AL7G46270 Arabidopsis lyrata HOM05D003263 ORTHO05D004801 2.9e-162 576.6 784 41.3
Nitab4.5_0006562g0010 Nicotiana tabacum HOM05D003263 ORTHO05D004801 6.5e-162 575.5 616 49.2
AUR62042225 Chenopodium quinoa HOM05D003263 ORTHO05D004801 4.6e-160 569.3 706 43.9
arahy.Tifrunner.gnm1.ann1.ZZ0CH2 Arachis hypogaea HOM05D003263 ORTHO05D004801 2.8e-157 560.1 851 39.4
SGA_v2.0_scaffold108G30966 Striga asiatica HOM05D003263 ORTHO05D004801 4.8e-157 559.3 711 43.6
Lalb_Chr15g0085021 Lupinus albus HOM05D003263 ORTHO05D004801 5.3e-156 555.8 702 43.7
vmacro18524 Vaccinium macrocarpon HOM05D003263 ORTHO05D004801 2.6e-155 553.5 761 43.0
CDE05G1041 Ceratophyllum demersum HOM05D003263 ORTHO05D004801 3.7e-149 533.1 785 40.8
Nn4g24447 Nelumbo nucifera HOM05D003263 ORTHO05D004801 1.2e-144 518.1 581 48.2
Dinv28178 Davidia involucrata HOM05D003263 ORTHO05D004801 3.8e-138 496.5 708 41.0
arahy.Tifrunner.gnm1.ann1.5H82NF Arachis hypogaea HOM05D003263 ORTHO05D004801 5.3e-132 476.1 618 43.7
MBI19_g09384_MAGBIO Magnolia biondii HOM05D003263 ORTHO05D004801 9.1e-132 475.3 1024 31.8
arahy.Tifrunner.gnm1.ann1.RIP12T Arachis hypogaea HOM05D003263 ORTHO05D004801 2.7e-128 463.8 618 43.2
Oeu062704.1 Olea europaea HOM05D003263 ORTHO05D004801 1.9e-92 344.7 303 54.8
SpUN1596_0010 Schrenkiella parvula HOM05D003263 ORTHO05D004801 1.1e-87 328.9 326 49.1
Thecc.K0008100 Theobroma cacao HOM05D003263 ORTHO05D004801 5.8e-86 323.2 259 59.1
TAR371G0371 Trochodendron aralioides HOM05D003263 ORTHO05D004801 6.6e-82 309.7 653 35.1
arahy.Tifrunner.gnm1.ann1.Z93KCA Arachis hypogaea HOM05D003263 ORTHO05D004801 8.1e-72 276.2 317 45.1
arahy.Tifrunner.gnm1.ann1.HY7M04 Arachis hypogaea HOM05D000164 ORTHO05D004801 3.1e-55 221.1 387 37.2
Haze_27240 Corylus avellana HOM05D003263 ORTHO05D004801 5.8e-54 216.9 386 39.1
Eucgr.J01637 Eucalyptus grandis HOM05D003263 ORTHO05D004801 4.2e-52 210.7 153 63.4
arahy.Tifrunner.gnm1.ann1.VKQW11 Arachis hypogaea HOM05D003263 ORTHO05D004801 3.4e-46 191.0 128 67.2
Oeu062706.1 Olea europaea HOM05D003263 ORTHO05D004801 6.7e-42 176.8 326 35.3
SpUn1854_0010 Schrenkiella parvula HOM05D003263 ORTHO05D004801 7.4e-41 173.3 303 35.6
SEGI_21193 Sequoiadendron giganteum HOM05D003263 ORTHO05D004801 1.3e-40 172.6 172 52.9
arahy.Tifrunner.gnm1.ann1.SN393R Arachis hypogaea HOM05D003263 ORTHO05D004801 2.2e-40 171.8 116 67.2
SEGI_05320 Sequoiadendron giganteum HOM05D003263 ORTHO05D004801 1.4e-36 159.1 125 60.0
Potri.017G136950 Populus trichocarpa HOM05D003263 ORTHO05D004801 2.5e-33 148.3 254 37.8
CSS0049015 Camellia sinensis var. sinensis HOM05D003263 ORTHO05D004801 6.3e-32 143.7 303 35.3
CSS0039899 Camellia sinensis var. sinensis HOM05D003263 ORTHO05D004801 3.1e-31 141.4 303 35.0
CBR_g44347 Chara braunii HOM05D003263 ORTHO05D004801 2.1e-27 128.6 151 48.3
SEGI_04560 Sequoiadendron giganteum HOM05D003263 ORTHO05D004801 2.3e-26 125.2 148 44.6
Haze_26208 Corylus avellana HOM05D006320 ORTHO05D007069 6.7e-26 123.6 86 79.1
Haze_26209 Corylus avellana HOM05D006320 ORTHO05D007069 6.7e-26 123.6 86 79.1
Actinidia28797 Actinidia chinensis HOM05D003263 ORTHO05D004801 2.4e-23 115.2 135 43.7
Oeu039332.1 Olea europaea HOM05D003263 ORTHO05D004801 3.4e-22 111.3 183 37.2
Sabra17G0054900 Salix brachista HOM05D003263 ORTHO05D004801 8.5e-21 106.7 248 32.3
MD16G1264300 Malus domestica HOM05D003263 ORTHO05D004801 3.2e-20 104.8 168 34.5
Thecc.K0008200 Theobroma cacao HOM05D003263 ORTHO05D004801 1.2e-19 102.8 222 33.3
CBR_g26339 Chara braunii HOM05D004987 ORTHO05D005960 1.6e-19 102.4 208 28.8
HanXRQChr17g0559491 Helianthus annuus HOM05D003263 ORTHO05D004801 3.6e-19 101.3 66 66.7
VMungo0647G1524 Vigna mungo HOM05D003263 ORTHO05D004801 1.4e-18 99.4 123 40.7
QL04p097132 Quercus lobata HOM05D003263 ORTHO05D000041 8.8e-18 96.7 116 47.4
MD16G1264400 Malus domestica HOM05D003263 ORTHO05D004801 1.7e-16 92.4 57 70.2
Cc04_g05630 Coffea canephora HOM05D003263 ORTHO05D004801 2.2e-13 82.0 63 61.9
Ca_19082_v3 Cicer arietinum L. HOM05D003263 ORTHO05D004801 6.5e-13 80.5 82 45.1
CSS0022568 Camellia sinensis var. sinensis HOM05D003263 ORTHO05D004801 7.2e-12 77.0 97 45.4
QL08p053439 Quercus lobata HOM05D003263 ORTHO05D004801 8.0e-11 73.6 48 64.6
Hund13091 Selenicereus undatus HOM05D003263 ORTHO05D004801 2.3e-10 72.0 105 39.0
Migut.M00197 Erythranthe guttata HOM05D003263 ORTHO05D004801 1.7e-08 65.9 69 46.4
Hma1.2p1_1425F.1_g282850 Hydrangea macrophylla HOM05D003263 ORTHO05D004801 1.7e-08 65.9 100 34.0
Sabra17G0112400 Salix brachista HOM05D003263 ORTHO05D003497 3.1e-07 61.6 136 33.1
Haze_26092 Corylus avellana HOM05D000743 ORTHO05D000580 4.1e-07 61.2 82 45.1


User provided reference genes

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