Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_26655 Corylus avellana HOM05D006107 ORTHO05D007455 2.8e-297 1024.6 561 100.0
Pp3c3_22750 Physcomitrium patens HOM05D006107 ORTHO05D007455 1.8e-179 633.3 552 59.4
Lj4g0016203 Lotus japonicus HOM05D006107 ORTHO05D007455 9.4e-176 620.9 568 56.2
Psat7g125400 Pisum sativum HOM05D006107 ORTHO05D007455 4.7e-175 618.6 558 56.3
Medtr4g085890 Medicago truncatula HOM05D006107 ORTHO05D007455 1.8e-174 616.7 565 55.9
TPR.G12695 Trifolium pratense HOM05D006107 ORTHO05D007455 3.0e-174 615.9 568 55.5
PSO541G4551 Papaver somniferum HOM05D006107 ORTHO05D007455 3.9e-174 615.5 565 55.2
Phvul.003G291600 Phaseolus vulgaris HOM05D006107 ORTHO05D007455 3.9e-174 615.5 555 56.2
AagrBONN_evm.TU.Sc2ySwM_368.3420 Anthoceros agrestis HOM05D006107 ORTHO05D007455 1.1e-173 614.0 564 56.4
Mapoly0009s0150 Marchantia polymorpha HOM05D006107 ORTHO05D007455 1.1e-173 614.0 557 56.4
Ca_18695_v3 Cicer arietinum L. HOM05D006107 ORTHO05D007455 1.5e-173 613.6 568 55.3
Atru.chr5.2684 Acer truncatum HOM05D006107 ORTHO05D007455 3.3e-173 612.5 562 55.9
BcaB03g11861 Brassica carinata HOM05D006107 ORTHO05D007455 4.4e-173 612.1 552 56.9
MBI03_g13479_MAGBIO Magnolia biondii HOM05D006107 ORTHO05D007455 4.4e-173 612.1 565 54.7
BcaC01g00937 Brassica carinata HOM05D006107 ORTHO05D007455 5.7e-173 611.7 552 55.8
Glyma.02G131500 Glycine max HOM05D006107 ORTHO05D007455 5.7e-173 611.7 568 54.9
THA.LOC104807265 Tarenaya hassleriana HOM05D006107 ORTHO05D007455 5.7e-173 611.7 553 55.3
Aqoxy6G01306 Aquilegia oxysepala HOM05D006107 ORTHO05D007455 9.7e-173 610.9 564 56.0
A08p17180 Brassica napus HOM05D006107 ORTHO05D007455 9.7e-173 610.9 552 55.8
Gohir.A12G023600 Gossypium hirsutum HOM05D006107 ORTHO05D007455 9.7e-173 610.9 553 55.2
C03p86150 Brassica napus HOM05D006107 ORTHO05D007455 1.3e-172 610.5 552 55.6
Thecc.02G102000 Theobroma cacao HOM05D006107 ORTHO05D007455 1.3e-172 610.5 568 54.4
QL11p035424 Quercus lobata HOM05D006107 ORTHO05D007455 1.7e-172 610.1 551 55.4
TWI31G1484 Tripterygium wilfordii HOM05D006107 ORTHO05D007455 1.7e-172 610.1 565 54.5
PSO675G2583 Papaver somniferum HOM05D006107 ORTHO05D007455 2.2e-172 609.8 565 54.9
BolC3t20903H Brassica oleracea HOM05D006107 ORTHO05D007455 2.8e-172 609.4 552 55.6
Glyma.07G213500 Glycine max HOM05D006107 ORTHO05D007455 2.8e-172 609.4 568 54.8
Gorai.008G024600 Gossypium raimondii HOM05D006107 ORTHO05D007455 2.8e-172 609.4 553 55.2
Ciclev10028103m.g Citrus clementina HOM05D006107 ORTHO05D007455 3.7e-172 609.0 565 54.7
Lj5A210T89 Lonicera japonica HOM05D006107 ORTHO05D007455 3.7e-172 609.0 565 54.5
VMungo0251G2128 Vigna mungo HOM05D006107 ORTHO05D007455 3.7e-172 609.0 552 55.8
arahy.Tifrunner.gnm1.ann1.Q9TTL4 Arachis hypogaea HOM05D006107 ORTHO05D007455 4.8e-172 608.6 568 54.0
BraA08t33679Z Brassica rapa HOM05D006107 ORTHO05D007455 4.8e-172 608.6 552 55.8
CANSAT25G2960 Cannabis sativa HOM05D006107 ORTHO05D007455 4.8e-172 608.6 553 56.1
Duzib132G0557 Durio zibethinus HOM05D006107 ORTHO05D007455 4.8e-172 608.6 565 54.0
Gohir.D12G024200 Gossypium hirsutum HOM05D006107 ORTHO05D007455 4.8e-172 608.6 553 55.0
Sabra09G0076700 Salix brachista HOM05D006107 ORTHO05D007455 4.8e-172 608.6 565 54.3
Sed0010263 Sechium edule HOM05D006107 ORTHO05D007455 4.8e-172 608.6 565 55.0
Aa31LG2G16450 Aethionema arabicum HOM05D006107 ORTHO05D007455 6.3e-172 608.2 553 56.1
Rhsim05G0085900 Rhododendron simsii HOM05D006107 ORTHO05D007455 6.3e-172 608.2 552 55.8
Cfa004529 Carpinus fangiana HOM05D006107 ORTHO05D007455 1.1e-171 607.4 552 56.2
Potri.009G100800 Populus trichocarpa HOM05D006107 ORTHO05D007455 1.1e-171 607.4 565 54.2
SalBow6G1673 Salvia bowleyana HOM05D006107 ORTHO05D007455 1.4e-171 607.1 562 55.3
TAR376G0662 Trochodendron aralioides HOM05D006107 ORTHO05D007455 1.8e-171 606.7 565 55.4
AT4G34030 Arabidopsis thaliana HOM05D006107 ORTHO05D007455 5.3e-171 605.1 557 55.5
RcHm_v2.0_Chr6g0257681 Rosa chinensis HOM05D006107 ORTHO05D007455 7.0e-171 604.7 552 55.8
CsaV3_7G008530 Cucumis sativus L. HOM05D006107 ORTHO05D007455 1.2e-170 604.0 553 55.7
A03p62570 Brassica napus HOM05D006107 ORTHO05D007455 2.0e-170 603.2 565 54.9
C07p60130 Brassica napus HOM05D006107 ORTHO05D007455 2.0e-170 603.2 552 55.6
BolC7t46453H Brassica oleracea HOM05D006107 ORTHO05D007455 2.0e-170 603.2 552 55.6
Migut.B00356 Erythranthe guttata HOM05D006107 ORTHO05D007455 2.0e-170 603.2 565 54.2
HPP92_004071 Vanilla planifolia HOM05D006107 ORTHO05D007455 2.0e-170 603.2 552 56.2
Cc02_g18880 Coffea canephora HOM05D006107 ORTHO05D007455 3.5e-170 602.4 561 54.7
HanXRQChr11g0331361 Helianthus annuus HOM05D006107 ORTHO05D007455 5.9e-170 601.7 565 53.5
Hma1.2p1_0474F.1_g160480 Hydrangea macrophylla HOM05D006107 ORTHO05D007455 5.9e-170 601.7 551 55.0
AL7G17360 Arabidopsis lyrata HOM05D006107 ORTHO05D007455 7.7e-170 601.3 557 55.1
Thhalv10024753m.g Eutrema salsugineum HOM05D006107 ORTHO05D007455 7.7e-170 601.3 557 55.1
Lalb_Chr16g0384781 Lupinus albus HOM05D006107 ORTHO05D007455 7.7e-170 601.3 568 53.5
Sc18g0004170 Simmondsia chinensis HOM05D006107 ORTHO05D007455 2.2e-169 599.7 552 56.5
Lsat_1_v5_gn_7_86820 Lactuca sativa HOM05D006107 ORTHO05D007455 3.8e-169 599.0 560 54.5
CSS0002619 Camellia sinensis var. sinensis HOM05D006107 ORTHO05D007455 5.0e-169 598.6 556 54.9
ECA236G2832 Erigeron canadensis HOM05D006107 ORTHO05D007455 5.0e-169 598.6 560 54.8
Hund06173 Selenicereus undatus HOM05D006107 ORTHO05D007455 5.0e-169 598.6 564 56.2
CSS0005791 Camellia sinensis var. sinensis HOM05D006107 ORTHO05D007455 6.5e-169 598.2 556 54.9
Sp7g31760 Schrenkiella parvula HOM05D006107 ORTHO05D007455 8.5e-169 597.8 552 54.7
SGA_v2.0_scaffold90G27632 Striga asiatica HOM05D006107 ORTHO05D007455 8.5e-169 597.8 563 55.1
FAN20G2345 Fragaria x ananassa HOM05D006107 ORTHO05D007455 1.1e-168 597.4 552 55.4
Eucgr.G01434 Eucalyptus grandis HOM05D006107 ORTHO05D007455 1.9e-168 596.7 565 54.2
Peaxi162Scf00016g01935 Petunia axillaris HOM05D006107 ORTHO05D007455 1.9e-168 596.7 552 55.4
Prupe.8G126800 Prunus persica HOM05D006107 ORTHO05D007455 1.9e-168 596.7 552 55.3
Carub.0007s0637 Capsella rubella HOM05D006107 ORTHO05D007455 2.5e-168 596.3 552 54.2
FAN15G1599 Fragaria x ananassa HOM05D006107 ORTHO05D007455 2.5e-168 596.3 552 55.4
PGR042G0079 Punica granatum HOM05D006107 ORTHO05D007455 2.5e-168 596.3 566 54.2
Zm00001eb179170 Zea mays HOM05D006107 ORTHO05D007455 5.5e-168 595.1 561 55.1
EL10Ac1g02230 Beta vulgaris HOM05D006107 ORTHO05D007455 7.2e-168 594.7 563 55.4
DCAR_001629 Daucus carota HOM05D006107 ORTHO05D007455 7.2e-168 594.7 563 55.6
CAN.G1041.37 Capsicum annuum HOM05D006107 ORTHO05D007455 9.4e-168 594.3 563 54.5
FvH4_2g05870 Fragaria vesca HOM05D006107 ORTHO05D007455 9.4e-168 594.3 552 55.1
ATR1126G046 Amborella trichopoda HOM05D006107 ORTHO05D007455 1.2e-167 594.0 556 54.7
FAN24G1318 Fragaria x ananassa HOM05D006107 ORTHO05D007455 4.7e-167 592.0 552 55.1
GSVIVG01031728001 Vitis vinifera HOM05D006107 ORTHO05D007455 4.7e-167 592.0 566 53.5
Solyc01g108030.4 Solanum lycopersicum HOM05D006107 ORTHO05D007455 6.1e-167 591.7 563 54.4
COL.COLO4_32644 Corchorus olitorius HOM05D006107 ORTHO05D007455 1.0e-166 590.9 555 55.0
PGSC0003DMG400025888 Solanum tuberosum HOM05D006107 ORTHO05D007455 1.0e-166 590.9 563 54.2
CDE10G1185 Ceratophyllum demersum HOM05D006107 ORTHO05D007455 2.3e-166 589.7 554 55.2
MD05G1082300 Malus domestica HOM05D006107 ORTHO05D007455 3.0e-166 589.3 553 54.4
Sopen01g050230 Solanum pennellii HOM05D006107 ORTHO05D007455 3.0e-166 589.3 554 54.7
Cre03.g181200 Chlamydomonas reinhardtii HOM05D006107 ORTHO05D007455 7.5e-165 584.7 568 54.8
AUR62035403 Chenopodium quinoa HOM05D006107 ORTHO05D007455 2.2e-164 583.2 586 53.9
RcHm_v2.0_Chr6g0257701 Rosa chinensis HOM05D006107 ORTHO05D007455 2.2e-164 583.2 565 53.1
BcaNung03357 Brassica carinata HOM05D006107 ORTHO05D007455 4.8e-164 582.0 554 54.7
arahy.Tifrunner.gnm1.ann1.H5D5IL Arachis hypogaea HOM05D006107 ORTHO05D007455 8.2e-164 581.3 594 51.2
PRCOL_00006414 Prasinoderma coloniale HOM05D006107 ORTHO05D007455 7.0e-163 578.2 550 54.7
ClCG02G006000 Citrullus lanatus HOM05D006107 ORTHO05D007455 3.5e-162 575.9 588 51.4
Haze_10087 Corylus avellana HOM05D006107 ORTHO05D007455 1.0e-161 574.3 561 53.1
Nitab4.5_0018866g0010 Nicotiana tabacum HOM05D006107 ORTHO05D007455 2.2e-161 573.2 580 52.4
Oeu007292.2 Olea europaea HOM05D006107 ORTHO05D007455 6.5e-161 571.6 511 57.7
Nn5g30280 Nelumbo nucifera HOM05D006107 ORTHO05D007455 8.5e-161 571.2 514 56.8
vmacro19505 Vaccinium macrocarpon HOM05D006107 ORTHO05D007455 6.1e-159 565.1 655 47.2
CARHR242170 Cardamine hirsuta HOM05D006107 ORTHO05D007455 8.0e-159 564.7 511 55.6
SEGI_09747 Sequoiadendron giganteum HOM05D006107 ORTHO05D007455 1.0e-158 564.3 512 56.2
FAN27G3033 Fragaria x ananassa HOM05D006107 ORTHO05D007455 1.2e-157 560.8 552 52.9
unitig_21.g20740 Utricularia gibba HOM05D006107 ORTHO05D007455 1.7e-156 557.0 564 52.1
Nitab4.5_0001428g0130 Nicotiana tabacum HOM05D006107 ORTHO05D007455 3.7e-156 555.8 561 52.0
SMO174G0062 Selaginella moellendorffii HOM05D006107 ORTHO05D007455 5.4e-155 552.0 565 52.0
CiPaw.05G007100 Carya illinoinensis HOM05D006107 ORTHO05D007455 3.2e-152 542.7 481 56.8
Manes.07G078100 Manihot esculenta HOM05D006107 ORTHO05D007455 5.5e-152 542.0 481 56.5
Dinv42164 Davidia involucrata HOM05D006107 ORTHO05D007455 1.2e-149 534.3 551 50.3
Haze_27116 Corylus avellana HOM05D006107 ORTHO05D007455 2.0e-149 533.5 479 57.2
MELO3C018456.2 Cucumis melo HOM05D006107 ORTHO05D007455 1.8e-147 526.9 471 57.1
Cpa.g.sc62.2 Carica papaya HOM05D006107 ORTHO05D007455 1.0e-145 521.2 477 55.3
HPP92_004116 Vanilla planifolia HOM05D006107 ORTHO05D007455 1.8e-142 510.4 552 49.6
Haze_26656 Corylus avellana HOM05D006107 ORTHO05D007455 2.2e-140 503.4 250 100.0
Haze_27030 Corylus avellana HOM05D006107 ORTHO05D007455 6.4e-140 501.9 561 48.3
AUR62041887 Chenopodium quinoa HOM05D006107 ORTHO05D007455 2.8e-119 433.3 508 48.2
Actinidia17868 Actinidia chinensis HOM05D006107 ORTHO05D007455 3.6e-111 406.4 439 49.0
Ah.00g000150 Amaranthus hybridus HOM05D006107 ORTHO05D007455 1.3e-87 328.2 373 49.3
Hma1.2p1_0474F.1_g160470 Hydrangea macrophylla HOM05D006107 ORTHO05D007455 7.6e-77 292.4 222 63.5
QL11p035444 Quercus lobata HOM05D006107 ORTHO05D007455 6.1e-58 229.6 160 68.8
CBR_g54985 Chara braunii HOM05D006107 ORTHO05D007455 3.8e-44 183.7 542 27.9
QL11p035447 Quercus lobata HOM05D006107 ORTHO05D007455 3.5e-21 107.5 80 62.5
Medtr3g011860 Medicago truncatula HOM05D006107 ORTHO05D007455 2.8e-18 97.8 197 32.5
Cfa025742 Carpinus fangiana HOM05D006107 ORTHO05D007455 3.6e-18 97.4 582 20.8
QL11p035449 Quercus lobata HOM05D006107 ORTHO05D007455 1.9e-14 85.1 66 50.0
Solyc01g108060.2 Solanum lycopersicum HOM05D006107 ORTHO05D007455 7.1e-06 56.6 29 82.8


User provided reference genes

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