Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_26650 Corylus avellana HOM05D004602 ORTHO05D005906 0.0e+00 2293.5 1208 100.0
Nn2g14888 Nelumbo nucifera HOM05D004602 ORTHO05D005906 3.8e-105 387.5 1131 27.7
Mapoly0022s0167 Marchantia polymorpha HOM05D004602 ORTHO05D005906 1.3e-102 379.0 1159 27.2
TAR636G3632 Trochodendron aralioides HOM05D004602 ORTHO05D005906 1.5e-101 375.6 1089 26.5
THA.LOC104824412 Tarenaya hassleriana HOM05D004602 ORTHO05D005906 3.3e-101 374.4 1127 26.1
Pp3c3_32300 Physcomitrium patens HOM05D004602 ORTHO05D005906 4.3e-101 374.0 1087 26.9
ATR0745G001 Amborella trichopoda HOM05D004602 ORTHO05D005906 2.8e-100 371.3 1133 26.3
TWI53G0771 Tripterygium wilfordii HOM05D004602 ORTHO05D005906 2.8e-100 371.3 1108 26.7
Ah.04g151080 Amaranthus hybridus HOM05D004602 ORTHO05D005906 1.4e-99 369.0 1103 27.5
MSTRG.19816 Avicennia marina HOM05D004602 ORTHO05D005906 1.4e-99 369.0 1169 26.8
AagrBONN_evm.TU.Sc2ySwM_362.2771 Anthoceros agrestis HOM05D004602 ORTHO05D005906 1.8e-99 368.6 1124 26.4
Haze_19715 Corylus avellana HOM05D004602 ORTHO05D005906 3.1e-99 367.9 1163 25.7
Prupe.7G042500 Prunus persica HOM05D004602 ORTHO05D005906 3.1e-99 367.9 1160 25.9
Peaxi162Scf01378g00118 Petunia axillaris HOM05D004602 ORTHO05D005906 4.0e-99 367.5 1098 26.5
PGR031G1006 Punica granatum HOM05D004602 ORTHO05D005906 9.0e-99 366.3 1178 27.2
DCAR_016876 Daucus carota HOM05D004602 ORTHO05D005906 1.2e-98 365.9 1144 26.8
Dinv08512 Davidia involucrata HOM05D004602 ORTHO05D005906 1.2e-98 365.9 1077 26.5
Manes.08G057600 Manihot esculenta HOM05D004602 ORTHO05D005906 2.0e-98 365.2 1162 26.0
Potri.006G041500 Populus trichocarpa HOM05D004602 ORTHO05D005906 2.6e-98 364.8 1119 26.4
Actinidia38152 Actinidia chinensis HOM05D004602 ORTHO05D005906 4.5e-98 364.0 1135 27.0
Lj1A1104G73 Lonicera japonica HOM05D004602 ORTHO05D005906 4.5e-98 364.0 1139 26.4
CAN.G641.74 Capsicum annuum HOM05D004602 ORTHO05D005906 9.9e-98 362.8 1092 26.2
PSO339G0660 Papaver somniferum HOM05D004602 ORTHO05D005906 9.9e-98 362.8 1185 26.6
MD14G1099800 Malus domestica HOM05D004602 ORTHO05D005906 2.9e-97 361.3 1165 26.0
PGSC0003DMG400029835 Solanum tuberosum HOM05D004602 ORTHO05D005906 4.9e-97 360.5 1094 26.3
AL5G38540 Arabidopsis lyrata HOM05D004602 ORTHO05D005906 6.4e-97 360.1 1095 26.0
SGA_v2.0_scaffold105G30304 Striga asiatica HOM05D004602 ORTHO05D005906 6.4e-97 360.1 1138 26.7
MELO3C009773.2 Cucumis melo HOM05D004602 ORTHO05D005906 1.1e-96 359.4 1146 25.9
Cpa.g.sc5.207 Carica papaya HOM05D004602 ORTHO05D005906 1.9e-96 358.6 1160 25.9
HanXRQChr06g0176911 Helianthus annuus HOM05D004602 ORTHO05D005906 4.2e-96 357.5 1134 26.2
A04p03790 Brassica napus HOM05D004602 ORTHO05D005906 5.4e-96 357.1 1114 25.6
CSS0013313 Camellia sinensis var. sinensis HOM05D004602 ORTHO05D005906 5.4e-96 357.1 1100 26.1
Sabra06G0028200 Salix brachista HOM05D004602 ORTHO05D005906 5.4e-96 357.1 1115 25.4
ClCG10G016070 Citrullus lanatus HOM05D004602 ORTHO05D005906 9.3e-96 356.3 1149 25.8
Solyc10g079730.3 Solanum lycopersicum HOM05D004602 ORTHO05D005906 1.2e-95 355.9 1094 26.2
BraA04t16055Z Brassica rapa HOM05D004602 ORTHO05D005906 1.6e-95 355.5 1114 25.4
PSO384G2446 Papaver somniferum HOM05D004602 ORTHO05D005906 1.6e-95 355.5 1142 27.0
SEGI_37933 Sequoiadendron giganteum HOM05D004602 ORTHO05D005906 2.7e-95 354.8 1097 25.6
AT3G57060 Arabidopsis thaliana HOM05D004602 ORTHO05D005906 4.6e-95 354.0 1115 26.0
CBR_g63081 Chara braunii HOM05D004602 ORTHO05D005906 7.9e-95 353.2 1168 26.2
Eucgr.A02262 Eucalyptus grandis HOM05D004602 ORTHO05D005906 7.9e-95 353.2 1136 25.6
BolC8t50853H Brassica oleracea HOM05D004602 ORTHO05D005906 1.3e-94 352.4 1088 25.9
RcHm_v2.0_Chr2g0125151 Rosa chinensis HOM05D004602 ORTHO05D005906 1.3e-94 352.4 1164 25.6
Sopen10g030360 Solanum pennellii HOM05D004602 ORTHO05D005906 1.3e-94 352.4 1094 26.1
Aqoxy2G00344 Aquilegia oxysepala HOM05D004602 ORTHO05D005906 1.8e-94 352.1 1139 25.6
Carub.0005s2386 Capsella rubella HOM05D004602 ORTHO05D005906 2.3e-94 351.7 1123 25.9
Migut.J01674 Erythranthe guttata HOM05D004602 ORTHO05D005906 2.3e-94 351.7 1082 26.3
A09p49980 Brassica napus HOM05D004602 ORTHO05D005906 3.0e-94 351.3 1089 25.6
BraA09t40448Z Brassica rapa HOM05D004602 ORTHO05D005906 3.0e-94 351.3 1089 25.6
EL10Ac3g07209 Beta vulgaris HOM05D004602 ORTHO05D005906 5.1e-94 350.5 1166 25.8
BolC4t25093H Brassica oleracea HOM05D004602 ORTHO05D005906 5.1e-94 350.5 1114 25.2
Ciclev10018515m.g Citrus clementina HOM05D004602 ORTHO05D005906 6.7e-94 350.1 1168 25.0
Glyma.02G157700 Glycine max HOM05D004602 ORTHO05D005906 6.7e-94 350.1 1090 26.0
BcaC02g09900 Brassica carinata HOM05D004602 ORTHO05D005906 8.7e-94 349.7 1114 25.2
C04p35390 Brassica napus HOM05D004602 ORTHO05D005906 8.7e-94 349.7 1114 25.2
C08p32390 Brassica napus HOM05D004602 ORTHO05D005906 1.1e-93 349.4 1088 25.9
FvH4_6g25220 Fragaria vesca HOM05D004602 ORTHO05D005906 1.1e-93 349.4 1147 25.8
AUR62030338 Chenopodium quinoa HOM05D004602 ORTHO05D005906 1.5e-93 349.0 1121 26.4
Thhalv10005748m.g Eutrema salsugineum HOM05D004602 ORTHO05D005906 1.9e-93 348.6 1092 25.8
Gorai.007G353800 Gossypium raimondii HOM05D004602 ORTHO05D005906 1.9e-93 348.6 1141 25.9
Lsat_1_v5_gn_8_82681 Lactuca sativa HOM05D004602 ORTHO05D005906 1.9e-93 348.6 1130 25.7
vmacro09030 Vaccinium macrocarpon HOM05D004602 ORTHO05D005906 2.5e-93 348.2 1218 25.8
Hund24628 Selenicereus undatus HOM05D004602 ORTHO05D005906 3.3e-93 347.8 1109 26.2
TPR.G19659 Trifolium pratense HOM05D004602 ORTHO05D005906 3.3e-93 347.8 1089 25.9
Cc06_g18890 Coffea canephora HOM05D004602 ORTHO05D005906 5.6e-93 347.1 1091 25.3
FAN14G4483 Fragaria x ananassa HOM05D004602 ORTHO05D005906 5.6e-93 347.1 1140 25.8
Psat6g123240 Pisum sativum HOM05D004602 ORTHO05D005906 5.6e-93 347.1 1094 25.7
Sp5g05520 Schrenkiella parvula HOM05D004602 ORTHO05D005906 7.4e-93 346.7 1114 25.7
Nitab4.5_0001364g0050 Nicotiana tabacum HOM05D004602 ORTHO05D005906 1.3e-92 345.9 1139 25.8
CSS0046388 Camellia sinensis var. sinensis HOM05D004602 ORTHO05D005906 1.6e-92 345.5 1027 26.7
CARHR167250 Cardamine hirsuta HOM05D004602 ORTHO05D005906 1.6e-92 345.5 1105 25.6
Lj5g0012838 Lotus japonicus HOM05D004602 ORTHO05D005906 1.6e-92 345.5 1091 25.6
Phvul.007G247800 Phaseolus vulgaris HOM05D004602 ORTHO05D005906 1.6e-92 345.5 1089 25.4
QL07p008767 Quercus lobata HOM05D004602 ORTHO05D005906 3.7e-92 344.4 1159 25.2
Duzib106G0250 Durio zibethinus HOM05D004602 ORTHO05D005906 4.8e-92 344.0 1134 25.7
Sc19g0008270 Simmondsia chinensis HOM05D004602 ORTHO05D005906 4.8e-92 344.0 1081 25.8
VMungo0720G1740 Vigna mungo HOM05D004602 ORTHO05D005906 4.8e-92 344.0 1097 25.7
Gohir.A11G308300 Gossypium hirsutum HOM05D004602 ORTHO05D005906 1.1e-91 342.8 1141 25.9
Medtr1g051230 Medicago truncatula HOM05D004602 ORTHO05D005906 1.1e-91 342.8 1089 26.1
Thecc.05G139800 Theobroma cacao HOM05D004602 ORTHO05D005906 1.4e-91 342.4 1137 25.2
unitig_21.g20921 Utricularia gibba HOM05D004602 ORTHO05D005906 1.8e-91 342.0 1136 25.2
Ca_26637_v3 Cicer arietinum L. HOM05D004602 ORTHO05D005906 3.1e-91 341.3 1081 25.6
ECA236G3238 Erigeron canadensis HOM05D004602 ORTHO05D005906 4.0e-91 340.9 1117 25.0
Zm00001eb329790 Zea mays HOM05D004602 ORTHO05D005906 4.0e-91 340.9 1086 25.8
Gohir.D11G323700 Gossypium hirsutum HOM05D004602 ORTHO05D005906 1.5e-90 339.0 1027 26.5
Nitab4.5_0000571g0090 Nicotiana tabacum HOM05D004602 ORTHO05D005906 4.5e-90 337.4 1094 25.8
FAN09G3373 Fragaria x ananassa HOM05D004602 ORTHO05D005906 7.6e-90 336.7 1148 25.8
Lalb_Chr02g0156531 Lupinus albus HOM05D004602 ORTHO05D005906 1.3e-89 335.9 1102 26.5
AUR62040826 Chenopodium quinoa HOM05D004602 ORTHO05D005906 2.9e-89 334.7 1086 26.2
arahy.Tifrunner.gnm1.ann1.F5KNV4 Arachis hypogaea HOM05D004602 ORTHO05D005906 3.8e-89 334.3 1170 25.6
arahy.Tifrunner.gnm1.ann1.0AC10P Arachis hypogaea HOM05D004602 ORTHO05D005906 1.4e-88 332.4 1163 24.9
Sed0020412 Sechium edule HOM05D004602 ORTHO05D005906 1.5e-85 322.4 1185 24.1
COL.COLO4_37951 Corchorus olitorius HOM05D004602 ORTHO05D005906 3.3e-85 321.2 1151 25.2
Oeu029496.3 Olea europaea HOM05D004602 ORTHO05D005906 3.3e-85 321.2 1083 26.0
Aa31LG10G11980 Aethionema arabicum HOM05D004602 ORTHO05D005906 4.3e-85 320.9 1181 25.6
CiPaw.09G045900 Carya illinoinensis HOM05D004602 ORTHO05D005906 7.4e-85 320.1 1023 26.1
SMO351G0392 Selaginella moellendorffii HOM05D004602 ORTHO05D005906 9.6e-85 319.7 1162 25.8
CsaV3_3G040360 Cucumis sativus L. HOM05D004602 ORTHO05D005906 1.3e-84 319.3 1148 24.7
Pp3c12_12160 Physcomitrium patens HOM05D004602 ORTHO05D005906 1.3e-84 319.3 1095 25.3
BcaC07g40081 Brassica carinata HOM05D004602 ORTHO05D005906 6.2e-84 317.0 980 26.3
SHI28280 Sapria himalayana HOM05D004602 ORTHO05D005906 6.2e-84 317.0 1055 26.0
Atru.chr1.1489 Acer truncatum HOM05D004602 ORTHO05D005906 2.0e-82 312.0 1113 26.4
Os07g0659500 Oryza sativa ssp. japonica HOM05D004602 ORTHO05D005906 6.5e-81 307.0 1085 25.0
BcaC07g40050 Brassica carinata HOM05D004602 ORTHO05D005906 1.9e-80 305.4 1111 24.3
Peaxi162Scf00970g00168 Petunia axillaris HOM05D004602 ORTHO05D005906 5.5e-80 303.9 1087 24.7
GSVIVG01033598001 Vitis vinifera HOM05D004602 ORTHO05D005906 7.9e-79 300.1 1169 23.8
Cfa024947 Carpinus fangiana HOM05D004602 ORTHO05D005906 4.3e-77 294.3 1033 26.5
PRCOL_00006547 Prasinoderma coloniale HOM05D004602 ORTHO05D005906 7.6e-74 283.5 1090 24.1
MCO05G584 Micromonas commoda HOM05D004602 ORTHO05D005906 1.7e-73 282.3 1255 25.0
BcaNung07305 Brassica carinata HOM05D004602 ORTHO05D005906 2.1e-71 275.4 980 24.8
CANSAT56G2079 Cannabis sativa HOM05D004602 ORTHO05D005906 3.3e-69 268.1 688 28.9
Rhsim04G0110600 Rhododendron simsii HOM05D004602 ORTHO05D005906 3.7e-68 264.6 1181 23.3
HPP92_025012 Vanilla planifolia HOM05D004602 ORTHO05D005906 1.0e-65 256.5 1010 23.8
FAN02G3171 Fragaria x ananassa HOM05D004602 ORTHO05D005906 4.7e-63 247.7 878 23.9
COL.COLO4_37953 Corchorus olitorius HOM05D004602 ORTHO05D005906 2.6e-29 135.6 342 31.3
CiPaw.16G087800 Carya illinoinensis HOM05D004602 ORTHO05D005906 1.3e-25 123.2 833 20.9
MBI13_g01621_MAGBIO Magnolia biondii HOM05D004602 ORTHO05D005906 2.6e-21 109.0 566 23.0
Cre10.g432500 Chlamydomonas reinhardtii HOM05D004602 ORTHO05D005906 1.4e-19 103.2 259 27.0
SalBow8G3517 Salvia bowleyana HOM05D004602 ORTHO05D005906 2.3e-14 85.9 166 38.6
SalBow8G5198 Salvia bowleyana HOM05D004602 ORTHO05D005906 2.3e-14 85.9 166 38.6
SalBow8G5420 Salvia bowleyana HOM05D004602 ORTHO05D005906 8.9e-14 84.0 156 39.7


User provided reference genes

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