Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_26583 Corylus avellana HOM05D005843 ORTHO05D007781 0.0e+00 1316.2 653 100.0
AUR62015928 Chenopodium quinoa HOM05D005843 ORTHO05D007781 1.2e-44 185.7 460 31.1
ECA238G1173 Erigeron canadensis HOM05D005843 ORTHO05D007781 5.5e-42 176.8 506 29.8
Carub.0006s0120 Capsella rubella HOM05D005843 ORTHO05D007781 9.3e-42 176.0 492 29.1
AL6G11640 Arabidopsis lyrata HOM05D005843 ORTHO05D007781 2.7e-41 174.5 493 29.6
BcaC06g31988 Brassica carinata HOM05D005843 ORTHO05D007781 4.6e-41 173.7 489 29.2
AT5G02410 Arabidopsis thaliana HOM05D005843 ORTHO05D007781 1.0e-40 172.6 492 28.9
THA.LOC104809903 Tarenaya hassleriana HOM05D005843 ORTHO05D007781 3.9e-40 170.6 498 27.1
Sp6g40070 Schrenkiella parvula HOM05D005843 ORTHO05D007781 6.7e-40 169.9 492 29.1
BcaNung02129 Brassica carinata HOM05D005843 ORTHO05D007781 8.7e-40 169.5 492 28.7
BcaNung05922 Brassica carinata HOM05D005843 ORTHO05D007781 8.7e-40 169.5 511 28.8
C03p00940 Brassica napus HOM05D005843 ORTHO05D007781 8.7e-40 169.5 488 27.9
BolC3t12656H Brassica oleracea HOM05D005843 ORTHO05D007781 8.7e-40 169.5 488 27.9
BolC9t60149H Brassica oleracea HOM05D005843 ORTHO05D007781 8.7e-40 169.5 492 28.7
CARHR211000 Cardamine hirsuta HOM05D005843 ORTHO05D007781 1.5e-39 168.7 509 29.5
Eucgr.K03141 Eucalyptus grandis HOM05D005843 ORTHO05D007781 1.5e-39 168.7 502 28.3
PGR004G0455 Punica granatum HOM05D005843 ORTHO05D007781 4.3e-39 167.2 504 27.2
DCAR_014847 Daucus carota HOM05D005843 ORTHO05D007781 5.6e-39 166.8 508 30.1
A10p33250 Brassica napus HOM05D005843 ORTHO05D007781 7.4e-39 166.4 495 29.1
Thhalv10013300m.g Eutrema salsugineum HOM05D005843 ORTHO05D007781 9.6e-39 166.0 496 28.6
BcaB01g06160 Brassica carinata HOM05D005843 ORTHO05D007781 2.1e-38 164.9 488 27.5
Medtr7g060680 Medicago truncatula HOM05D005843 ORTHO05D007781 3.7e-38 164.1 518 28.2
Solyc09g010770.3 Solanum lycopersicum HOM05D005843 ORTHO05D007781 4.8e-38 163.7 495 29.3
Cc06_g02690 Coffea canephora HOM05D005843 ORTHO05D007781 6.2e-38 163.3 504 29.4
Nn8g39667 Nelumbo nucifera HOM05D005843 ORTHO05D007781 1.4e-37 162.2 506 29.1
Lalb_Chr19g0125371 Lupinus albus HOM05D005843 ORTHO05D007781 1.8e-37 161.8 506 29.4
Gorai.006G173000 Gossypium raimondii HOM05D005843 ORTHO05D007781 6.9e-37 159.8 506 27.3
Sc20g0004950 Simmondsia chinensis HOM05D005843 ORTHO05D007781 6.9e-37 159.8 522 28.4
Thecc.05G040300 Theobroma cacao HOM05D005843 ORTHO05D007781 6.9e-37 159.8 511 28.4
arahy.Tifrunner.gnm1.ann1.JAB43P Arachis hypogaea HOM05D005843 ORTHO05D007781 9.0e-37 159.5 499 28.1
Ca_26026_v3 Cicer arietinum L. HOM05D005843 ORTHO05D007781 1.5e-36 158.7 502 28.3
Atru.chr8.1969 Acer truncatum HOM05D005843 ORTHO05D007781 2.0e-36 158.3 511 27.6
A03p00670 Brassica napus HOM05D005843 ORTHO05D007781 2.6e-36 157.9 500 27.8
TWI38G1602 Tripterygium wilfordii HOM05D005843 ORTHO05D007781 2.6e-36 157.9 494 28.7
MELO3C003129.2 Cucumis melo HOM05D005843 ORTHO05D007781 4.5e-36 157.1 492 29.1
GSVIVG01034179001 Vitis vinifera HOM05D005843 ORTHO05D007781 4.5e-36 157.1 492 28.7
Gohir.A09G156300 Gossypium hirsutum HOM05D005843 ORTHO05D007781 5.8e-36 156.8 511 27.8
Gohir.D09G151700 Gossypium hirsutum HOM05D005843 ORTHO05D007781 5.8e-36 156.8 508 27.6
Phvul.008G100900 Phaseolus vulgaris HOM05D005843 ORTHO05D007781 7.6e-36 156.4 487 27.7
Psat5g101400 Pisum sativum HOM05D005843 ORTHO05D007781 7.6e-36 156.4 522 28.0
C09p74160 Brassica napus HOM05D005843 ORTHO05D007781 1.0e-35 156.0 450 29.1
BraA03t09456Z Brassica rapa HOM05D005843 ORTHO05D007781 1.0e-35 156.0 507 27.0
PSO151G0180 Papaver somniferum HOM05D005843 ORTHO05D007781 1.3e-35 155.6 511 28.6
Manes.17G047400 Manihot esculenta HOM05D005843 ORTHO05D007781 1.7e-35 155.2 508 29.1
SHI00339 Sapria himalayana HOM05D005843 ORTHO05D007781 1.7e-35 155.2 505 26.9
SMO137G0039 Selaginella moellendorffii HOM05D005843 ORTHO05D007781 1.7e-35 155.2 489 29.7
Sopen09g005490 Solanum pennellii HOM05D005843 ORTHO05D007781 1.7e-35 155.2 514 27.2
Haze_20785 Corylus avellana HOM05D005843 ORTHO05D007781 2.2e-35 154.8 521 26.5
Glyma.07G131100 Glycine max HOM05D005843 ORTHO05D007781 2.2e-35 154.8 502 28.7
VMungo1383G2898 Vigna mungo HOM05D005843 ORTHO05D007781 2.2e-35 154.8 495 28.3
RcHm_v2.0_Chr3g0466751 Rosa chinensis HOM05D005843 ORTHO05D007781 3.8e-35 154.1 508 27.0
TPR.G23290 Trifolium pratense HOM05D005843 ORTHO05D007781 4.9e-35 153.7 518 27.2
CAN.G326.14 Capsicum annuum HOM05D005843 ORTHO05D007781 6.5e-35 153.3 515 27.6
HanXRQChr16g0515781 Helianthus annuus HOM05D005843 ORTHO05D007781 6.5e-35 153.3 480 27.7
Lsat_1_v5_gn_2_17401 Lactuca sativa HOM05D005843 ORTHO05D007781 8.4e-35 152.9 491 28.3
CANSAT35G1785 Cannabis sativa HOM05D005843 ORTHO05D007781 1.4e-34 152.1 514 28.0
PSO339G2649 Papaver somniferum HOM05D005843 ORTHO05D007781 1.4e-34 152.1 518 27.8
Pp3c4_12410 Physcomitrium patens HOM05D005843 ORTHO05D007781 1.9e-34 151.8 505 27.7
TAR633G1568 Trochodendron aralioides HOM05D005843 ORTHO05D007781 3.2e-34 151.0 506 27.9
CsaV3_4G024980 Cucumis sativus L. HOM05D005843 ORTHO05D007781 7.1e-34 149.8 489 28.4
Rhsim05G0192300 Rhododendron simsii HOM05D005843 ORTHO05D007781 7.1e-34 149.8 515 27.2
EL10Ac3g07255 Beta vulgaris HOM05D005843 ORTHO05D007781 9.3e-34 149.4 507 27.2
CiPaw.09G192200 Carya illinoinensis HOM05D005843 ORTHO05D007781 9.3e-34 149.4 498 25.9
Hma1.2p1_1513F.1_g288040 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 9.3e-34 149.4 506 28.5
Prupe.6G254200 Prunus persica HOM05D005843 ORTHO05D007781 1.6e-33 148.7 508 27.8
MD12G1140900 Malus domestica HOM05D005843 ORTHO05D007781 4.6e-33 147.1 501 27.1
Nitab4.5_0001190g0070 Nicotiana tabacum HOM05D005843 ORTHO05D007781 4.6e-33 147.1 506 27.1
Sed0019468 Sechium edule HOM05D005843 ORTHO05D007781 6.0e-33 146.7 483 28.6
PGSC0003DMG400008911 Solanum tuberosum HOM05D005843 ORTHO05D007781 6.0e-33 146.7 517 26.1
SGA_v2.0_scaffold75G24948 Striga asiatica HOM05D005843 ORTHO05D007781 7.9e-33 146.4 488 26.8
QL06p005681 Quercus lobata HOM05D005843 ORTHO05D007781 1.0e-32 146.0 508 25.8
Migut.J00332 Erythranthe guttata HOM05D005843 ORTHO05D007781 2.3e-32 144.8 491 27.5
Duzib128G1977 Durio zibethinus HOM05D005843 ORTHO05D007781 3.0e-32 144.4 524 27.7
Cpa.g.sc332.7 Carica papaya HOM05D005843 ORTHO05D007781 5.1e-32 143.7 507 27.6
MD04G1127500 Malus domestica HOM05D005843 ORTHO05D007781 5.1e-32 143.7 503 26.6
FAN05G5617 Fragaria x ananassa HOM05D005843 ORTHO05D007781 6.7e-32 143.3 504 26.8
SalBow3G1829 Salvia bowleyana HOM05D005843 ORTHO05D007781 6.7e-32 143.3 510 25.5
ClCG04G008190 Citrullus lanatus HOM05D005843 ORTHO05D007781 1.1e-31 142.5 513 28.8
Oeu024347.1 Olea europaea HOM05D005843 ORTHO05D007781 3.3e-31 141.0 506 26.5
FAN14G2296 Fragaria x ananassa HOM05D005843 ORTHO05D007781 4.3e-31 140.6 506 26.3
Hund24578 Selenicereus undatus HOM05D005843 ORTHO05D007781 5.7e-31 140.2 511 26.8
Aa31LG1G22390 Aethionema arabicum HOM05D005843 ORTHO05D007781 7.4e-31 139.8 564 26.1
Glyma.18G179500 Glycine max HOM05D005843 ORTHO05D007781 2.1e-30 138.3 458 27.7
Aqoxy6G01388 Aquilegia oxysepala HOM05D005843 ORTHO05D007781 4.8e-30 137.1 506 27.1
FAN09G3893 Fragaria x ananassa HOM05D005843 ORTHO05D007781 2.4e-29 134.8 510 25.3
HPP92_000805 Vanilla planifolia HOM05D005843 ORTHO05D007781 2.4e-29 134.8 505 25.7
QL11p021821 Quercus lobata HOM05D005843 ORTHO05D007781 3.1e-29 134.4 546 24.7
Peaxi162Scf00165g01322 Petunia axillaris HOM05D005843 ORTHO05D007781 4.1e-29 134.0 529 25.9
Lj3C968G10 Lonicera japonica HOM05D005843 ORTHO05D007781 9.0e-29 132.9 545 25.9
Actinidia26464 Actinidia chinensis HOM05D005843 ORTHO05D000250 2.0e-28 131.7 468 27.4
CSS0035027 Camellia sinensis var. sinensis HOM05D005843 ORTHO05D007781 4.5e-28 130.6 457 28.9
CBR_g29861 Chara braunii HOM05D005843 ORTHO05D000002 7.6e-28 129.8 215 35.8
Potri.006G084800 Populus trichocarpa HOM05D005843 ORTHO05D007781 1.7e-27 128.6 237 35.9
unitig_26.g9195 Utricularia gibba HOM05D005843 ORTHO05D007781 2.2e-27 128.3 242 33.9
Lj3g0024665 Lotus japonicus HOM05D005843 ORTHO05D007781 1.1e-26 125.9 219 33.8
arahy.Tifrunner.gnm1.ann1.HAEF8J Arachis hypogaea HOM05D005843 ORTHO05D007781 1.9e-26 125.2 226 35.4
Mapoly0047s0019 Marchantia polymorpha HOM05D005843 ORTHO05D007781 1.9e-26 125.2 510 24.3
Os04g0503700 Oryza sativa ssp. japonica HOM05D005843 ORTHO05D007781 1.9e-26 125.2 238 33.2
Zm00001eb078080 Zea mays HOM05D005843 ORTHO05D007781 1.2e-25 122.5 237 33.8
Dinv37176 Davidia involucrata HOM05D005843 ORTHO05D007781 1.6e-25 122.1 237 33.8
Hma1.2p1_1513F.1_g288030 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 1.6e-25 122.1 238 34.0
Sabra06G0064400 Salix brachista HOM05D005843 ORTHO05D007781 2.1e-25 121.7 515 26.4
Dinv35609 Davidia involucrata HOM05D005843 ORTHO05D007781 1.3e-24 119.0 434 27.9
AUR62030297 Chenopodium quinoa HOM05D005843 ORTHO05D007781 2.2e-22 111.7 588 22.6
AagrBONN_evm.TU.Sc2ySwM_117.1914 Anthoceros agrestis HOM05D005843 ORTHO05D007781 6.3e-22 110.2 397 26.7
FAN02G2362 Fragaria x ananassa HOM05D005843 ORTHO05D007781 8.2e-22 109.8 533 23.8
CDE09G0345 Ceratophyllum demersum HOM05D005843 ORTHO05D007781 8.5e-19 99.8 235 31.9
vmacro20152 Vaccinium macrocarpon HOM05D005843 ORTHO05D007781 1.1e-18 99.4 366 29.5
SGA_v2.0_scaffold75G24944 Striga asiatica HOM05D005843 ORTHO05D007781 1.6e-17 95.5 152 36.2
Cre01.g041300 Chlamydomonas reinhardtii HOM05D005843 ORTHO05D007781 2.1e-17 95.1 210 33.8
DCAR_015734 Daucus carota HOM05D005843 ORTHO05D007781 2.7e-17 94.7 133 42.9
TAR636G2087 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.7e-14 85.5 155 36.1
FvH4_6g13910 Fragaria vesca HOM05D005843 ORTHO05D007781 2.2e-11 75.1 338 24.6
Nitab4.5_0002018g0090 Nicotiana tabacum HOM05D005843 ORTHO05D007781 1.2e-09 69.3 56 53.6
AUR62018365 Chenopodium quinoa HOM05D005843 ORTHO05D007781 2.3e-08 65.1 60 51.7
Hma1.2p1_1611F.1_g293520 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 4.4e-07 60.8 51 52.9
BcaC06g31987 Brassica carinata HOM05D005843 ORTHO05D007781 7.4e-07 60.1 308 24.0
A03p00710 Brassica napus HOM05D005843 ORTHO05D007781 9.7e-07 59.7 46 54.3
TAR636G3605 Trochodendron aralioides HOM05D005843 ORTHO05D007781 9.7e-07 59.7 61 45.9
SEGI_08652 Sequoiadendron giganteum HOM05D005843 ORTHO05D000001 1.3e-06 59.3 46 52.2
DCAR_015735 Daucus carota HOM05D005843 ORTHO05D007781 1.7e-06 58.9 51 51.0


User provided reference genes

Program Settings