Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_26508 Corylus avellana HOM05D006359 ORTHO05D007871 8.2e-90 333.6 153 100.0
PSO782G4768 Papaver somniferum HOM05D006359 ORTHO05D007871 1.9e-14 83.2 141 39.0
PSO063G2711 Papaver somniferum HOM05D006359 ORTHO05D007871 1.2e-13 80.5 141 36.9
Cre11.g467767 Chlamydomonas reinhardtii HOM05D006359 ORTHO05D007871 2.3e-12 76.3 105 37.1
Potri.019G051400 Populus trichocarpa HOM05D006359 ORTHO05D007871 2.3e-12 76.3 108 41.7
Aqoxy3G02089 Aquilegia oxysepala HOM05D006359 ORTHO05D007871 4.0e-12 75.5 112 42.9
Ca_23151_v3 Cicer arietinum L. HOM05D006359 ORTHO05D007871 4.0e-12 75.5 161 37.9
AUR62002057 Chenopodium quinoa HOM05D006359 ORTHO05D007871 5.2e-12 75.1 146 37.7
Pp3c16_5910 Physcomitrium patens HOM05D006359 ORTHO05D007871 5.2e-12 75.1 134 41.8
Sopen03g027690 Solanum pennellii HOM05D006359 ORTHO05D007871 5.2e-12 75.1 146 35.6
TWI74G0194 Tripterygium wilfordii HOM05D006359 ORTHO05D007871 5.2e-12 75.1 109 41.3
FvH4_7g33890 Fragaria vesca HOM05D006359 ORTHO05D007871 6.8e-12 74.7 110 42.7
RcHm_v2.0_Chr1g0384091 Rosa chinensis HOM05D006359 ORTHO05D007871 8.9e-12 74.3 139 38.8
Sabra19G0057200 Salix brachista HOM05D006359 ORTHO05D007871 8.9e-12 74.3 108 39.8
CiPaw.06G019000 Carya illinoinensis HOM05D006359 ORTHO05D007871 1.2e-11 73.9 143 35.7
HanXRQChr12g0381881 Helianthus annuus HOM05D006359 ORTHO05D007871 1.5e-11 73.6 112 43.8
Nitab4.5_0000021g0410 Nicotiana tabacum HOM05D006359 ORTHO05D007871 1.5e-11 73.6 113 42.5
ECA246G3947 Erigeron canadensis HOM05D006359 ORTHO05D007871 2.0e-11 73.2 112 43.8
Lj3A888T26 Lonicera japonica HOM05D006359 ORTHO05D007871 2.0e-11 73.2 112 43.8
PGR042G0220 Punica granatum HOM05D006359 ORTHO05D007871 2.0e-11 73.2 109 41.3
QL09p024508 Quercus lobata HOM05D006359 ORTHO05D007871 2.0e-11 73.2 113 41.6
SMO331G0004 Selaginella moellendorffii HOM05D006359 ORTHO05D007871 2.0e-11 73.2 89 47.2
Hund09785 Selenicereus undatus HOM05D006359 ORTHO05D007871 2.0e-11 73.2 108 39.8
CAN.G303.77 Capsicum annuum HOM05D006359 ORTHO05D007871 2.6e-11 72.8 110 41.8
AUR62028171 Chenopodium quinoa HOM05D006359 ORTHO05D007871 2.6e-11 72.8 108 40.7
Os10g0579300 Oryza sativa ssp. japonica HOM05D006359 ORTHO05D007871 2.6e-11 72.8 110 41.8
PGSC0003DMG402000567 Solanum tuberosum HOM05D006359 ORTHO05D007871 2.6e-11 72.8 146 35.6
MELO3C005389.2 Cucumis melo HOM05D006359 ORTHO05D007871 3.4e-11 72.4 113 41.6
arahy.Tifrunner.gnm1.ann1.0WZ6H1 Arachis hypogaea HOM05D006359 ORTHO05D007871 4.4e-11 72.0 114 42.1
CDE11G0363 Ceratophyllum demersum HOM05D006359 ORTHO05D007871 4.4e-11 72.0 85 44.7
FAN01G1102 Fragaria x ananassa HOM05D006359 ORTHO05D007871 4.4e-11 72.0 117 40.2
FAN03G1870 Fragaria x ananassa HOM05D006359 ORTHO05D007871 4.4e-11 72.0 155 35.5
arahy.Tifrunner.gnm1.ann1.N39QDT Arachis hypogaea HOM05D006359 ORTHO05D007871 5.8e-11 71.6 114 42.1
CANSAT56G0993 Cannabis sativa HOM05D006359 ORTHO05D007871 5.8e-11 71.6 109 40.4
CsaV3_5G005640 Cucumis sativus L. HOM05D006359 ORTHO05D007871 5.8e-11 71.6 113 42.5
Eucgr.K00090 Eucalyptus grandis HOM05D006359 ORTHO05D007871 5.8e-11 71.6 116 40.5
Lsat_1_v5_gn_3_105561 Lactuca sativa HOM05D006359 ORTHO05D007871 5.8e-11 71.6 110 42.7
MCO08G302 Micromonas commoda HOM05D006359 ORTHO05D007871 5.8e-11 71.6 58 60.3
Sed0002409 Sechium edule HOM05D006359 ORTHO05D007871 5.8e-11 71.6 113 42.5
Sed0025211 Sechium edule HOM05D006359 ORTHO05D007871 5.8e-11 71.6 113 42.5
CDE02G3318 Ceratophyllum demersum HOM05D005498 ORTHO05D006719 7.6e-11 71.2 85 44.7
Ciclev10022653m.g Citrus clementina HOM05D006359 ORTHO05D007871 7.6e-11 71.2 143 35.0
MD01G1235400 Malus domestica HOM05D006359 ORTHO05D007871 7.6e-11 71.2 112 40.2
SalBow4G0660 Salvia bowleyana HOM05D006359 ORTHO05D007871 7.6e-11 71.2 113 39.8
SalBow4G2166 Salvia bowleyana HOM05D006359 ORTHO05D007871 7.6e-11 71.2 113 39.8
Medtr8g009960 Medicago truncatula HOM05D006359 ORTHO05D007871 9.9e-11 70.9 83 53.0
MD07G1308200 Malus domestica HOM05D006359 ORTHO05D007871 1.3e-10 70.5 112 39.3
TAR375G0743 Trochodendron aralioides HOM05D006359 ORTHO05D007871 1.3e-10 70.5 110 40.0
Mapoly0001s0046 Marchantia polymorpha HOM05D006359 ORTHO05D007871 1.7e-10 70.1 130 35.4
Zm00001eb224990 Zea mays HOM05D006359 ORTHO05D007871 1.7e-10 70.1 81 48.1
VMungo1215G3178 Vigna mungo HOM05D006359 ORTHO05D007871 2.2e-10 69.7 89 47.2
AagrBONN_evm.TU.Sc2ySwM_344.5152 Anthoceros agrestis HOM05D006359 ORTHO05D007871 2.9e-10 69.3 148 35.1
arahy.Tifrunner.gnm1.ann1.K5IGPH Arachis hypogaea HOM05D006359 ORTHO05D007871 2.9e-10 69.3 89 47.2
Cpa.g.sc39.69 Carica papaya HOM05D006359 ORTHO05D007871 2.9e-10 69.3 156 34.6
FAN02G0767 Fragaria x ananassa HOM05D006359 ORTHO05D007871 2.9e-10 69.3 123 41.5
FAN03G2552 Fragaria x ananassa HOM05D006359 ORTHO05D007871 2.9e-10 69.3 117 39.3
Nitab4.5_0011930g0020 Nicotiana tabacum HOM05D006359 ORTHO05D007871 2.9e-10 69.3 142 34.5
HPP92_002578 Vanilla planifolia HOM05D006076 ORTHO05D007871 2.9e-10 69.3 115 40.9
CBR_g23185 Chara braunii HOM05D000019 ORTHO05D000002 4.9e-10 68.6 112 40.2
Cc02_g00330 Coffea canephora HOM05D006359 ORTHO05D007871 4.9e-10 68.6 112 41.1
Migut.F00100 Erythranthe guttata HOM05D006359 ORTHO05D007871 4.9e-10 68.6 113 39.8
Lalb_Chr05g0211271 Lupinus albus HOM05D006359 ORTHO05D007871 4.9e-10 68.6 115 40.9
Prupe.2G325400 Prunus persica HOM05D006359 ORTHO05D007871 4.9e-10 68.6 137 36.5
SGA_v2.0_scaffold18G08507 Striga asiatica HOM05D006359 ORTHO05D007871 4.9e-10 68.6 113 39.8
THA.LOC104820881 Tarenaya hassleriana HOM05D006359 ORTHO05D007871 4.9e-10 68.6 117 38.5
Zm00001eb025210 Zea mays HOM05D006359 ORTHO05D007871 4.9e-10 68.6 111 39.6
Manes.08G162700 Manihot esculenta HOM05D006359 ORTHO05D007871 6.4e-10 68.2 112 41.1
EL10Ac3g05084 Beta vulgaris HOM05D006359 ORTHO05D007871 8.4e-10 67.8 106 38.7
Sc13g0010840 Simmondsia chinensis HOM05D006359 ORTHO05D007871 8.4e-10 67.8 112 41.1
Aa31LG5G13580 Aethionema arabicum HOM05D006359 ORTHO05D007871 1.1e-09 67.4 113 39.8
ATR0829G118 Amborella trichopoda HOM05D006359 ORTHO05D007871 1.1e-09 67.4 110 40.0
FAN05G5659 Fragaria x ananassa HOM05D006359 ORTHO05D007871 1.1e-09 67.4 98 42.9
TPR.G17376 Trifolium pratense HOM05D006359 ORTHO05D007871 1.1e-09 67.4 83 49.4
TPR.G779 Trifolium pratense HOM05D006359 ORTHO05D007871 1.1e-09 67.4 83 49.4
Phvul.002G039500 Phaseolus vulgaris HOM05D006359 ORTHO05D007871 1.4e-09 67.0 87 46.0
SGA_v2.0_scaffold44G16885 Striga asiatica HOM05D006359 ORTHO05D007871 1.4e-09 67.0 112 39.3
Cfa015873 Carpinus fangiana HOM05D006359 ORTHO05D007871 2.4e-09 66.2 110 39.1
COL.COLO4_25307 Corchorus olitorius HOM05D006359 ORTHO05D007871 2.4e-09 66.2 110 38.2
Glyma.01G228400 Glycine max HOM05D006359 ORTHO05D007871 2.4e-09 66.2 113 38.9
Glyma.11G011200 Glycine max HOM05D006359 ORTHO05D007871 2.4e-09 66.2 111 39.6
Lj3g0004693 Lotus japonicus HOM05D006359 ORTHO05D007871 2.4e-09 66.2 110 39.1
arahy.Tifrunner.gnm1.ann1.PN0BWC Arachis hypogaea HOM05D006359 ORTHO05D007871 3.2e-09 65.9 80 50.0
Hma1.2p1_0758F.1_g213680 Hydrangea macrophylla HOM05D006359 ORTHO05D007871 3.2e-09 65.9 77 50.6
Hma1.2p1_0758F.1_g213690 Hydrangea macrophylla HOM05D006359 ORTHO05D007871 3.2e-09 65.9 77 50.6
Psat4g215600 Pisum sativum HOM05D006359 ORTHO05D007871 3.2e-09 65.9 57 61.4
HPP92_002574 Vanilla planifolia HOM05D004915 ORTHO05D006048 3.2e-09 65.9 83 47.0
HPP92_002576 Vanilla planifolia HOM05D004915 ORTHO05D006048 3.2e-09 65.9 83 47.0
AL3G12700 Arabidopsis lyrata HOM05D006359 ORTHO05D007871 4.1e-09 65.5 112 41.1
AT3G03100 Arabidopsis thaliana HOM05D006359 ORTHO05D007871 4.1e-09 65.5 112 41.1
FAN10G1928 Fragaria x ananassa HOM05D006359 ORTHO05D007871 4.1e-09 65.5 53 60.4
Peaxi162Scf00745g00854 Petunia axillaris HOM05D006359 ORTHO05D007871 4.1e-09 65.5 112 41.1
unitig_0.g2431 Utricularia gibba HOM05D001194 ORTHO05D007871 4.1e-09 65.5 111 37.8
Atru.chr12.1978 Acer truncatum HOM05D006359 ORTHO05D007871 5.4e-09 65.1 111 39.6
Duzib168G1989 Durio zibethinus HOM05D006359 ORTHO05D007871 5.4e-09 65.1 110 39.1
Gohir.A09G104700 Gossypium hirsutum HOM05D006359 ORTHO05D007871 5.4e-09 65.1 110 38.2
Gohir.D09G101400 Gossypium hirsutum HOM05D006359 ORTHO05D007871 5.4e-09 65.1 110 38.2
Gorai.006G118800 Gossypium raimondii HOM05D006359 ORTHO05D007871 5.4e-09 65.1 110 38.2
Rhsim09G0212500 Rhododendron simsii HOM05D006359 ORTHO05D007871 5.4e-09 65.1 89 44.9
vmacro10188 Vaccinium macrocarpon HOM05D006359 ORTHO05D007871 5.4e-09 65.1 89 44.9
BolC1t05848H Brassica oleracea HOM05D006359 ORTHO05D007871 7.1e-09 64.7 112 39.3
BraA01t04593Z Brassica rapa HOM05D006359 ORTHO05D007871 7.1e-09 64.7 112 39.3
Duzib150G0394 Durio zibethinus HOM05D006359 ORTHO05D007871 7.1e-09 64.7 110 39.1
Thhalv10021682m.g Eutrema salsugineum HOM05D006359 ORTHO05D007871 7.1e-09 64.7 112 39.3
Sp3g02140 Schrenkiella parvula HOM05D006359 ORTHO05D007871 7.1e-09 64.7 112 39.3
THA.LOC104827217 Tarenaya hassleriana HOM05D006359 ORTHO05D007871 7.1e-09 64.7 112 39.3
Actinidia18703 Actinidia chinensis HOM05D006359 ORTHO05D007871 9.2e-09 64.3 114 37.7
CARHR077120 Cardamine hirsuta HOM05D006359 ORTHO05D007871 9.2e-09 64.3 112 39.3
Carub.0003s0225 Capsella rubella HOM05D006359 ORTHO05D007871 1.2e-08 63.9 112 40.2
A05p44080 Brassica napus HOM05D006359 ORTHO05D007871 1.6e-08 63.5 110 38.2
C05p63700 Brassica napus HOM05D006359 ORTHO05D007871 1.6e-08 63.5 110 38.2
BolC5t35039H Brassica oleracea HOM05D006359 ORTHO05D007871 1.6e-08 63.5 110 38.2
BraSC90t46703Z Brassica rapa HOM05D006359 ORTHO05D007871 1.6e-08 63.5 110 38.2
Thecc.09G264700 Theobroma cacao HOM05D006359 ORTHO05D007871 2.1e-08 63.2 110 38.2
CSS0011317 Camellia sinensis var. sinensis HOM05D006359 ORTHO05D007871 4.6e-08 62.0 110 38.2
ClCG01G005390 Citrullus lanatus HOM05D006359 ORTHO05D007871 4.6e-08 62.0 109 35.8
Dinv29162 Davidia involucrata HOM05D006359 ORTHO05D007871 4.6e-08 62.0 117 39.3
GSVIVG01024414001 Vitis vinifera HOM05D006359 ORTHO05D007871 1.3e-07 60.5 81 45.7
Nn1g01943 Nelumbo nucifera HOM05D006359 ORTHO05D007871 1.7e-07 60.1 82 42.7
TPR.G4015 Trifolium pratense HOM05D006359 ORTHO05D007871 1.7e-07 60.1 78 47.4
BNapus_Darmor_BZH_scaffold_129p00020 Brassica napus HOM05D006359 ORTHO05D007871 5.1e-07 58.5 79 45.6
BcaB04g21383 Brassica carinata HOM05D006359 ORTHO05D007871 6.6e-07 58.2 57 54.4


User provided reference genes

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