Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_26504 Corylus avellana HOM05D003274 ORTHO05D003714 1.8e-112 409.5 235 100.0
Zm00001eb321340 Zea mays HOM05D003274 ORTHO05D003714 5.9e-23 112.1 135 45.9
MCO12G091 Micromonas commoda HOM05D003274 ORTHO05D003714 1.0e-22 111.3 196 36.2
Os03g0108400 Oryza sativa ssp. japonica HOM05D003274 ORTHO05D003714 1.0e-22 111.3 139 44.6
Pp3c15_15320 Physcomitrium patens HOM05D003274 ORTHO05D003714 6.6e-22 108.6 205 35.1
Cre07.g324400 Chlamydomonas reinhardtii HOM05D003274 ORTHO05D003714 1.1e-21 107.8 144 42.4
Carub.0005s1078 Capsella rubella HOM05D003274 ORTHO05D003714 5.6e-21 105.5 136 44.9
MBI18_g42726_MAGBIO Magnolia biondii HOM05D003274 ORTHO05D003714 9.5e-21 104.8 137 43.8
MD01G1102500 Malus domestica HOM05D003274 ORTHO05D003714 3.6e-20 102.8 138 41.3
FvH4_7g18680 Fragaria vesca HOM05D003274 ORTHO05D003714 2.3e-19 100.1 139 39.6
FAN06G1450 Fragaria x ananassa HOM05D003274 ORTHO05D003714 2.3e-19 100.1 139 39.6
TWI79G0911 Tripterygium wilfordii HOM05D003274 ORTHO05D003714 8.9e-19 98.2 198 34.3
HPP92_008502 Vanilla planifolia HOM05D003274 ORTHO05D003714 1.3e-17 94.4 187 41.7
Mapoly0195s0002 Marchantia polymorpha HOM05D003274 ORTHO05D003714 1.7e-17 94.0 174 41.4
Haze_16745 Corylus avellana HOM05D003274 ORTHO05D003714 2.9e-17 93.2 189 37.0
Gorai.011G235800 Gossypium raimondii HOM05D003274 ORTHO05D003714 8.3e-17 91.7 139 40.3
HanXRQChr04g0103601 Helianthus annuus HOM05D003274 ORTHO05D003714 8.3e-17 91.7 135 40.7
Aqoxy1G01133 Aquilegia oxysepala HOM05D003274 ORTHO05D003714 1.1e-16 91.3 137 39.4
CSS0031341 Camellia sinensis var. sinensis HOM05D003274 ORTHO05D003714 1.4e-16 90.9 180 32.2
arahy.Tifrunner.gnm1.ann1.2XGG6Y Arachis hypogaea HOM05D003274 ORTHO05D003714 2.4e-16 90.1 139 41.0
Migut.N02565 Erythranthe guttata HOM05D003274 ORTHO05D003714 2.4e-16 90.1 137 39.4
Lsat_1_v5_gn_6_44161 Lactuca sativa HOM05D003274 ORTHO05D003714 2.4e-16 90.1 136 40.4
ATR0723G021 Amborella trichopoda HOM05D003274 ORTHO05D003714 3.2e-16 89.7 136 39.7
TWI63G1596 Tripterygium wilfordii HOM05D003274 ORTHO05D003714 3.2e-16 89.7 141 38.3
Gohir.D04G005200 Gossypium hirsutum HOM05D003274 ORTHO05D003714 4.1e-16 89.4 141 39.7
Nn2g13817 Nelumbo nucifera HOM05D003274 ORTHO05D003714 4.1e-16 89.4 137 38.7
Lalb_Chr01g0004551 Lupinus albus HOM05D003274 ORTHO05D003714 9.2e-16 88.2 208 38.5
CBR_g1004 Chara braunii HOM05D003274 ORTHO05D003714 1.6e-15 87.4 164 34.1
Phvul.011G085100 Phaseolus vulgaris HOM05D003274 ORTHO05D003714 1.6e-15 87.4 136 39.7
Aqoxy2G01722 Aquilegia oxysepala HOM05D003274 ORTHO05D003714 2.0e-15 87.0 136 39.0
Nitab4.5_0001163g0120 Nicotiana tabacum HOM05D003274 ORTHO05D003714 2.0e-15 87.0 136 39.7
AagrBONN_evm.TU.Sc2ySwM_368.224 Anthoceros agrestis HOM05D003274 ORTHO05D003714 2.7e-15 86.7 162 42.6
arahy.Tifrunner.gnm1.ann1.RYV3A9 Arachis hypogaea HOM05D003274 ORTHO05D003714 2.7e-15 86.7 135 40.7
Lj3g0011566 Lotus japonicus HOM05D003274 ORTHO05D003714 2.7e-15 86.7 185 40.0
QL01p015396 Quercus lobata HOM05D003274 ORTHO05D003714 2.7e-15 86.7 133 39.8
Rhsim01G0211400 Rhododendron simsii HOM05D003274 ORTHO05D003714 2.7e-15 86.7 184 33.7
arahy.Tifrunner.gnm1.ann1.R6Y7HN Arachis hypogaea HOM05D003274 ORTHO05D003714 3.5e-15 86.3 135 40.7
EL10Ac7g16339 Beta vulgaris HOM05D003274 ORTHO05D003714 3.5e-15 86.3 215 35.3
Sed0002530 Sechium edule HOM05D003274 ORTHO05D003714 4.6e-15 85.9 136 40.4
SEGI_32844 Sequoiadendron giganteum HOM05D003274 ORTHO05D003714 4.6e-15 85.9 137 38.7
Solyc06g074840.3 Solanum lycopersicum HOM05D003274 ORTHO05D003714 7.8e-15 85.1 135 39.3
Sopen06g031270 Solanum pennellii HOM05D003274 ORTHO05D003714 7.8e-15 85.1 135 39.3
PGSC0003DMG400007136 Solanum tuberosum HOM05D003274 ORTHO05D003714 7.8e-15 85.1 135 39.3
Cfa025582 Carpinus fangiana HOM05D003274 ORTHO05D003714 1.0e-14 84.7 109 40.4
Sabra08G0023100 Salix brachista HOM05D003274 ORTHO05D003714 1.0e-14 84.7 149 37.6
SalBow4G3301 Salvia bowleyana HOM05D003274 ORTHO05D003714 1.0e-14 84.7 134 41.0
VMungo1127G1114 Vigna mungo HOM05D003274 ORTHO05D003714 1.0e-14 84.7 135 39.3
CAN.G546.24 Capsicum annuum HOM05D003274 ORTHO05D003714 1.3e-14 84.3 137 38.0
Gorai.012G006500 Gossypium raimondii HOM05D003274 ORTHO05D003714 1.3e-14 84.3 135 39.3
DCAR_015514 Daucus carota HOM05D003274 ORTHO05D003714 2.3e-14 83.6 194 36.6
Lsat_1_v5_gn_1_62640 Lactuca sativa HOM05D003274 ORTHO05D003714 2.3e-14 83.6 136 38.2
Dinv34732 Davidia involucrata HOM05D003274 ORTHO05D003714 3.0e-14 83.2 137 37.2
Duzib106G1403 Durio zibethinus HOM05D003274 ORTHO05D003714 3.0e-14 83.2 137 39.4
Glyma.04G151500 Glycine max HOM05D003274 ORTHO05D003714 3.0e-14 83.2 162 40.7
TAR636G2234 Trochodendron aralioides HOM05D003274 ORTHO05D003714 3.0e-14 83.2 138 37.0
Gohir.A10G202200 Gossypium hirsutum HOM05D003274 ORTHO05D003714 3.9e-14 82.8 138 37.7
SGA_v2.0_scaffold277G46690 Striga asiatica HOM05D003274 ORTHO05D003714 3.9e-14 82.8 188 37.2
Thecc.09G349700 Theobroma cacao HOM05D003274 ORTHO05D003714 3.9e-14 82.8 138 37.7
CSS0017437 Camellia sinensis var. sinensis HOM05D003274 ORTHO05D003714 5.0e-14 82.4 137 38.0
CSS0044730 Camellia sinensis var. sinensis HOM05D003274 ORTHO05D003714 5.0e-14 82.4 137 38.0
Lj4g0007028 Lotus japonicus HOM05D003274 ORTHO05D003714 5.0e-14 82.4 192 38.0
TAR623G0611 Trochodendron aralioides HOM05D003274 ORTHO05D003714 5.0e-14 82.4 186 38.2
Glyma.06G211400 Glycine max HOM05D003274 ORTHO05D003714 6.6e-14 82.0 135 37.8
Lalb_Chr03g0027661 Lupinus albus HOM05D003274 ORTHO05D003714 6.6e-14 82.0 135 38.5
Prupe.2G208100 Prunus persica HOM05D003274 ORTHO05D003714 6.6e-14 82.0 139 35.3
Medtr4g057565 Medicago truncatula HOM05D003274 ORTHO05D003714 8.6e-14 81.6 135 39.3
Nitab4.5_0002001g0020 Nicotiana tabacum HOM05D003274 ORTHO05D003714 1.1e-13 81.3 135 39.3
PRCOL_00005449 Prasinoderma coloniale HOM05D003274 ORTHO05D003714 1.1e-13 81.3 131 36.6
Gohir.D10G210400 Gossypium hirsutum HOM05D003274 ORTHO05D003714 1.5e-13 80.9 86 53.5
Glyma.12G080000 Glycine max HOM05D003274 ORTHO05D003714 1.9e-13 80.5 185 37.8
arahy.Tifrunner.gnm1.ann1.A7H879 Arachis hypogaea HOM05D003274 ORTHO05D003714 2.5e-13 80.1 147 38.1
AUR62038139 Chenopodium quinoa HOM05D003274 ORTHO05D003714 2.5e-13 80.1 200 35.0
Psat7g149280 Pisum sativum HOM05D003274 ORTHO05D003714 5.6e-13 79.0 135 37.8
BraA02t05701Z Brassica rapa HOM05D003274 ORTHO05D003714 7.3e-13 78.6 138 37.0
FAN10G0869 Fragaria x ananassa HOM05D003274 ORTHO05D003714 7.3e-13 78.6 139 34.5
Ah.08g216240 Amaranthus hybridus HOM05D003274 ORTHO05D003714 9.5e-13 78.2 168 33.9
Thecc.10G085700 Theobroma cacao HOM05D003274 ORTHO05D003714 9.5e-13 78.2 139 36.7
BcaB08g36387 Brassica carinata HOM05D003274 ORTHO05D003714 1.2e-12 77.8 134 37.3
TWI31G0037 Tripterygium wilfordii HOM05D003274 ORTHO05D003714 1.6e-12 77.4 186 34.9
Peaxi162Scf00892g00008 Petunia axillaris HOM05D003274 ORTHO05D003714 2.1e-12 77.0 135 37.0
Ciclev10032656m.g Citrus clementina HOM05D003274 ORTHO05D003714 2.8e-12 76.6 189 33.9
AUR62009827 Chenopodium quinoa HOM05D003274 ORTHO05D003714 3.6e-12 76.3 188 35.1
Actinidia24139 Actinidia chinensis HOM05D003274 ORTHO05D003714 4.7e-12 75.9 137 37.2
MD11G1146600 Malus domestica HOM05D003274 ORTHO05D003714 4.7e-12 75.9 139 34.5
C09p53640 Brassica napus HOM05D003274 ORTHO05D003714 6.2e-12 75.5 138 36.2
BolC9t58239H Brassica oleracea HOM05D003274 ORTHO05D003714 6.2e-12 75.5 138 36.2
PSO063G0736 Papaver somniferum HOM05D003274 ORTHO05D003714 6.2e-12 75.5 138 35.5
Phvul.L001682 Phaseolus vulgaris HOM05D003274 ORTHO05D003714 1.0e-11 74.7 155 35.5
DCAR_018775 Daucus carota HOM05D003274 ORTHO05D003714 3.1e-11 73.2 141 44.0
MD00G1032300 Malus domestica HOM05D003274 ORTHO05D003714 4.0e-11 72.8 141 33.3
COL.COLO4_36536 Corchorus olitorius HOM05D003274 ORTHO05D003714 5.2e-11 72.4 183 31.7
Atru.chr12.859 Acer truncatum HOM05D003274 ORTHO05D003714 6.8e-11 72.0 189 32.8
PGR142G0129 Punica granatum HOM05D003274 ORTHO05D003714 6.8e-11 72.0 141 34.8
AL5G23460 Arabidopsis lyrata HOM05D003274 ORTHO05D003714 1.2e-10 71.2 149 34.2
MSTRG.18696 Avicennia marina HOM05D003274 ORTHO05D003714 1.5e-10 70.9 137 35.8
ECA233G5403 Erigeron canadensis HOM05D003274 ORTHO05D003714 1.5e-10 70.9 193 34.7
Potri.008G034700 Populus trichocarpa HOM05D003274 ORTHO05D003714 1.5e-10 70.9 139 34.5
Prupe.6G109700 Prunus persica HOM05D003274 ORTHO05D003714 5.8e-10 68.9 185 35.7
TPR.G21105 Trifolium pratense HOM05D003274 ORTHO05D003714 5.8e-10 68.9 133 34.6
Ca_19311_v3 Cicer arietinum L. HOM05D003274 ORTHO05D003714 7.5e-10 68.6 133 45.1
Hund20851 Selenicereus undatus HOM05D003274 ORTHO05D003714 7.5e-10 68.6 145 31.7
Ah.15g094140 Amaranthus hybridus HOM05D004498 ORTHO05D005300 9.8e-10 68.2 115 38.3
CANSAT56G3857 Cannabis sativa HOM05D003274 ORTHO05D003714 9.8e-10 68.2 141 33.3
Cc01_g10420 Coffea canephora HOM05D003274 ORTHO05D003714 9.8e-10 68.2 137 34.3
Solyc11g066260.2 Solanum lycopersicum HOM05D003274 ORTHO05D003714 2.2e-09 67.0 138 34.8
Sopen11g026000 Solanum pennellii HOM05D003274 ORTHO05D003714 2.2e-09 67.0 138 34.8
PGSC0003DMG400000449 Solanum tuberosum HOM05D003274 ORTHO05D003714 2.2e-09 67.0 138 34.8
BraA10t43883Z Brassica rapa HOM05D003274 ORTHO05D003714 3.7e-09 66.2 138 34.1
PSO339G3703 Papaver somniferum HOM05D003274 ORTHO05D003714 3.7e-09 66.2 138 33.3
Aa31LG4G14140 Aethionema arabicum HOM05D003274 ORTHO05D003714 4.9e-09 65.9 163 30.7
A10p18080 Brassica napus HOM05D003274 ORTHO05D003714 6.4e-09 65.5 138 34.1
Migut.D02268 Erythranthe guttata HOM05D003274 ORTHO05D003714 6.4e-09 65.5 188 34.6
A03p10970 Brassica napus HOM05D003274 ORTHO05D003714 8.3e-09 65.1 138 33.3
BraA03t10407Z Brassica rapa HOM05D003274 ORTHO05D003714 8.3e-09 65.1 138 33.3
Thhalv10014580m.g Eutrema salsugineum HOM05D003274 ORTHO05D003714 1.1e-08 64.7 138 34.1
Nitab4.5_0000329g0200 Nicotiana tabacum HOM05D003274 ORTHO05D003714 1.1e-08 64.7 185 35.1
Atru.chr3.3534 Acer truncatum HOM05D003274 ORTHO05D003714 1.4e-08 64.3 185 35.7
CSS0018307 Camellia sinensis var. sinensis HOM05D003274 ORTHO05D003714 1.4e-08 64.3 135 33.3
Cpa.g.sc1.15 Carica papaya HOM05D003274 ORTHO05D003714 1.4e-08 64.3 201 31.8
Sp6g22440 Schrenkiella parvula HOM05D003274 ORTHO05D003714 1.4e-08 64.3 138 33.3
Zm00001eb000670 Zea mays HOM05D003274 ORTHO05D003714 1.4e-08 64.3 87 42.5
FAN01G1914 Fragaria x ananassa HOM05D003274 ORTHO05D003714 2.4e-08 63.5 139 30.2
PSO017G5390 Papaver somniferum HOM05D003274 ORTHO05D003714 3.2e-08 63.2 138 32.6
CiPaw.02G171700 Carya illinoinensis HOM05D003274 ORTHO05D003714 4.1e-08 62.8 137 36.5
SMO137G0389 Selaginella moellendorffii HOM05D002330 ORTHO05D002411 4.1e-08 62.8 147 27.9
Duzib150G1519 Durio zibethinus HOM05D003274 ORTHO05D003714 5.4e-08 62.4 199 32.7
FvH4_3g30890 Fragaria vesca HOM05D003274 ORTHO05D003714 5.4e-08 62.4 139 33.1
FAN25G1779 Fragaria x ananassa HOM05D003274 ORTHO05D003714 5.4e-08 62.4 139 33.1
RcHm_v2.0_Chr1g0362411 Rosa chinensis HOM05D003274 ORTHO05D003714 5.4e-08 62.4 141 29.1
vmacro14399 Vaccinium macrocarpon HOM05D003274 ORTHO05D003714 5.4e-08 62.4 163 31.3
MELO3C004945.2 Cucumis melo HOM05D003274 ORTHO05D003714 7.0e-08 62.0 183 33.9
CSS0030722 Camellia sinensis var. sinensis HOM05D003274 ORTHO05D003714 9.2e-08 61.6 135 33.3
vmacro03261 Vaccinium macrocarpon HOM05D003274 ORTHO05D003714 9.2e-08 61.6 109 36.7
Actinidia32108 Actinidia chinensis HOM05D003274 ORTHO05D003714 1.2e-07 61.2 136 32.4
Eucgr.B03938 Eucalyptus grandis HOM05D003274 ORTHO05D003714 1.2e-07 61.2 139 32.4
Manes.04G014101 Manihot esculenta HOM05D003274 ORTHO05D003714 1.2e-07 61.2 139 31.7
Nn6g35260 Nelumbo nucifera HOM05D003274 ORTHO05D003714 1.2e-07 61.2 186 34.4
RcHm_v2.0_Chr5g0057111 Rosa chinensis HOM05D003274 ORTHO05D003714 1.2e-07 61.2 185 34.6
THA.LOC104810876 Tarenaya hassleriana HOM05D003274 ORTHO05D003714 1.2e-07 61.2 138 32.6
FAN21G3294 Fragaria x ananassa HOM05D003274 ORTHO05D003714 1.6e-07 60.8 185 34.1
Manes.11G151400 Manihot esculenta HOM05D003274 ORTHO05D003714 1.6e-07 60.8 139 30.9
Pp3c9_19830 Physcomitrium patens HOM05D003274 ORTHO05D003714 1.6e-07 60.8 101 38.6
THA.LOC104799520 Tarenaya hassleriana HOM05D003274 ORTHO05D003714 1.6e-07 60.8 200 30.0
AT5G22950 Arabidopsis thaliana HOM05D003274 ORTHO05D003714 2.0e-07 60.5 138 32.6
CAN.G1432.14 Capsicum annuum HOM05D003274 ORTHO05D003714 2.0e-07 60.5 135 32.6
CiPaw.01G268000 Carya illinoinensis HOM05D003274 ORTHO05D003714 2.0e-07 60.5 190 30.0
Pp3c15_14920 Physcomitrium patens HOM05D003274 ORTHO05D003714 2.0e-07 60.5 87 42.5
COL.COLO4_11113 Corchorus olitorius HOM05D003274 ORTHO05D003714 2.7e-07 60.1 199 32.2
THA.LOC104815322 Tarenaya hassleriana HOM05D003526 ORTHO05D004123 2.7e-07 60.1 199 28.6
CDE06G0550 Ceratophyllum demersum HOM05D003274 ORTHO05D003714 4.6e-07 59.3 134 32.8
Gohir.A03G029800 Gossypium hirsutum HOM05D003274 ORTHO05D003714 4.6e-07 59.3 199 32.2
Gohir.D03G138700 Gossypium hirsutum HOM05D003274 ORTHO05D003714 7.8e-07 58.5 199 32.2
Gorai.003G145500 Gossypium raimondii HOM05D003274 ORTHO05D003714 7.8e-07 58.5 199 32.2
GSVIVG01031487001 Vitis vinifera HOM05D003274 ORTHO05D003714 7.8e-07 58.5 136 31.6
PRCOL_00001326 Prasinoderma coloniale HOM05D003526 ORTHO05D004123 1.0e-06 58.2 189 30.7
PGR102G1455 Punica granatum HOM05D003274 ORTHO05D003714 1.0e-06 58.2 143 30.8
SGA_v2.0_scaffold436G51602 Striga asiatica HOM05D003274 ORTHO05D003714 1.0e-06 58.2 163 30.7
Psat6g062360 Pisum sativum HOM05D002330 ORTHO05D002411 1.7e-06 57.4 183 30.1
Rhsim13G0099900 Rhododendron simsii HOM05D003274 ORTHO05D003714 1.7e-06 57.4 135 31.9
HanXRQChr01g0019541 Helianthus annuus HOM05D003274 ORTHO05D003714 2.3e-06 57.0 183 33.3
Cfa002449 Carpinus fangiana HOM05D002330 ORTHO05D002411 3.9e-06 56.2 184 31.5
Medtr1g069715 Medicago truncatula HOM05D000077 ORTHO05D002411 3.9e-06 56.2 195 30.3
Os10g0476400 Oryza sativa ssp. japonica HOM05D002330 ORTHO05D002411 3.9e-06 56.2 178 23.0
Potri.004G215500 Populus trichocarpa HOM05D003274 ORTHO05D003714 3.9e-06 56.2 139 30.2
CARHR190580 Cardamine hirsuta HOM05D003274 ORTHO05D003714 5.0e-06 55.8 138 31.2
TPR.G35711 Trifolium pratense HOM05D002330 ORTHO05D002411 6.6e-06 55.5 195 30.8


User provided reference genes

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