Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_26496 Corylus avellana HOM05D004955 ORTHO05D005965 4.0e-145 518.1 265 100.0
AT5G18070 Arabidopsis thaliana HOM05D004955 ORTHO05D005965 1.0e-55 221.1 283 46.3
Thecc.07G110200 Theobroma cacao HOM05D004955 ORTHO05D005965 6.6e-55 218.4 286 45.5
Pp3c15_140 Physcomitrium patens HOM05D004955 ORTHO05D005965 8.7e-55 218.0 284 44.0
THA.LOC104814429 Tarenaya hassleriana HOM05D004955 ORTHO05D005965 1.1e-54 217.6 280 46.1
Carub.0006s1636 Capsella rubella HOM05D004955 ORTHO05D005965 1.5e-54 217.2 283 44.5
Aqoxy3G03106 Aquilegia oxysepala HOM05D004955 ORTHO05D005965 1.9e-54 216.9 276 45.7
Psat2g174720 Pisum sativum HOM05D004955 ORTHO05D005965 2.5e-54 216.5 285 45.3
Lsat_1_v5_gn_6_66461 Lactuca sativa HOM05D004955 ORTHO05D005965 3.3e-54 216.1 273 44.7
PSO541G5086 Papaver somniferum HOM05D004955 ORTHO05D005965 3.3e-54 216.1 277 45.8
Aa31LG9G15390 Aethionema arabicum HOM05D004955 ORTHO05D005965 4.3e-54 215.7 280 46.4
ATR0829G014 Amborella trichopoda HOM05D004955 ORTHO05D005965 4.3e-54 215.7 282 44.0
Lj2g0012431 Lotus japonicus HOM05D004955 ORTHO05D005965 4.3e-54 215.7 282 46.1
BraA10t44206Z Brassica rapa HOM05D004955 ORTHO05D005965 5.6e-54 215.3 277 46.2
COL.COLO4_17563 Corchorus olitorius HOM05D004955 ORTHO05D005965 7.3e-54 214.9 284 44.7
Lalb_Chr16g0379231 Lupinus albus HOM05D004955 ORTHO05D005965 7.3e-54 214.9 282 45.0
BcaC04g18728 Brassica carinata HOM05D004955 ORTHO05D005965 9.6e-54 214.5 277 45.8
CARHR195050 Cardamine hirsuta HOM05D004955 ORTHO05D005965 9.6e-54 214.5 281 45.2
Duzib213G0438 Durio zibethinus HOM05D004955 ORTHO05D005965 1.3e-53 214.2 284 45.1
Gohir.D01G034800 Gossypium hirsutum HOM05D004955 ORTHO05D005965 1.3e-53 214.2 284 45.4
PSO017G5366 Papaver somniferum HOM05D004955 ORTHO05D005965 1.3e-53 214.2 280 45.4
Phvul.002G003600 Phaseolus vulgaris HOM05D004955 ORTHO05D005965 1.3e-53 214.2 285 44.6
Gohir.A01G044000 Gossypium hirsutum HOM05D004955 ORTHO05D005965 1.6e-53 213.8 284 44.0
Ciclev10031124m.g Citrus clementina HOM05D004955 ORTHO05D005965 2.1e-53 213.4 282 47.2
C09p58920 Brassica napus HOM05D004955 ORTHO05D005965 2.8e-53 213.0 277 45.1
BolC9t58736H Brassica oleracea HOM05D004955 ORTHO05D005965 2.8e-53 213.0 277 45.5
Gorai.002G043000 Gossypium raimondii HOM05D004955 ORTHO05D005965 2.8e-53 213.0 284 45.1
QL12p007112 Quercus lobata HOM05D004955 ORTHO05D005965 2.8e-53 213.0 284 45.1
A10p21440 Brassica napus HOM05D004955 ORTHO05D005965 4.8e-53 212.2 277 44.8
C03p10070 Brassica napus HOM05D004955 ORTHO05D005965 4.8e-53 212.2 284 44.7
BraA03t10187Z Brassica rapa HOM05D004955 ORTHO05D005965 4.8e-53 212.2 284 44.7
CANSAT80G1132 Cannabis sativa HOM05D004955 ORTHO05D005965 6.2e-53 211.8 280 45.4
Ca_24631_v3 Cicer arietinum L. HOM05D004955 ORTHO05D005965 6.2e-53 211.8 282 44.3
Thhalv10013080m.g Eutrema salsugineum HOM05D004955 ORTHO05D005965 6.2e-53 211.8 276 45.7
MELO3C015301.2 Cucumis melo HOM05D004955 ORTHO05D005965 8.1e-53 211.5 283 43.8
PSO063G1154 Papaver somniferum HOM05D004955 ORTHO05D005965 8.1e-53 211.5 280 45.0
VMungo1215G2917 Vigna mungo HOM05D004955 ORTHO05D005965 8.1e-53 211.5 282 44.3
Nn1g00613 Nelumbo nucifera HOM05D004955 ORTHO05D005965 1.1e-52 211.1 283 43.5
Sp6g26230 Schrenkiella parvula HOM05D004955 ORTHO05D005965 1.4e-52 210.7 277 45.1
TAR375G0042 Trochodendron aralioides HOM05D004955 ORTHO05D005965 1.4e-52 210.7 283 44.5
Rhsim09G0128800 Rhododendron simsii HOM05D004955 ORTHO05D005965 1.8e-52 210.3 284 44.4
vmacro00352 Vaccinium macrocarpon HOM05D004955 ORTHO05D005965 1.8e-52 210.3 269 45.4
CsaV3_1G038770 Cucumis sativus L. HOM05D004955 ORTHO05D005965 2.4e-52 209.9 283 43.1
MBI04_g44837_MAGBIO Magnolia biondii HOM05D004955 ORTHO05D005965 2.4e-52 209.9 283 44.9
BcaB01g05173 Brassica carinata HOM05D004955 ORTHO05D005965 3.1e-52 209.5 284 44.4
BolC3t13493H Brassica oleracea HOM05D004955 ORTHO05D005965 3.1e-52 209.5 284 44.4
Medtr5g013970 Medicago truncatula HOM05D004955 ORTHO05D005965 3.1e-52 209.5 281 44.5
MSTRG.1970 Avicennia marina HOM05D004955 ORTHO05D005965 4.0e-52 209.1 287 43.6
RcHm_v2.0_Chr7g0208321 Rosa chinensis HOM05D004955 ORTHO05D005965 4.0e-52 209.1 281 43.1
Eucgr.D02153 Eucalyptus grandis HOM05D004955 ORTHO05D005965 5.3e-52 208.8 279 44.8
A03p08630 Brassica napus HOM05D004955 ORTHO05D005965 6.9e-52 208.4 284 45.4
PRCOL_00000375 Prasinoderma coloniale HOM05D004955 ORTHO05D005965 6.9e-52 208.4 268 46.3
vmacro21668 Vaccinium macrocarpon HOM05D004955 ORTHO05D005965 6.9e-52 208.4 284 43.7
AagrBONN_evm.TU.Sc2ySwM_362.507 Anthoceros agrestis HOM05D004955 ORTHO05D005965 9.0e-52 208.0 284 43.0
AL6G29260 Arabidopsis lyrata HOM05D004955 ORTHO05D005965 9.0e-52 208.0 280 45.0
CiPaw.12G060300 Carya illinoinensis HOM05D004955 ORTHO05D005965 9.0e-52 208.0 287 44.3
Glyma.01G201400 Glycine max HOM05D004955 ORTHO05D005965 9.0e-52 208.0 284 44.7
Sed0006321 Sechium edule HOM05D004955 ORTHO05D005965 1.2e-51 207.6 283 41.7
Atru.BG.31.p Acer truncatum HOM05D004955 ORTHO05D005965 1.5e-51 207.2 282 45.7
Atru.chr6.1775 Acer truncatum HOM05D004955 ORTHO05D005965 1.5e-51 207.2 282 45.7
Prupe.5G046300 Prunus persica HOM05D004955 ORTHO05D005965 2.0e-51 206.8 284 43.7
ECA233G2813 Erigeron canadensis HOM05D004955 ORTHO05D005965 2.6e-51 206.5 275 44.0
Cre08.g379700 Chlamydomonas reinhardtii HOM05D004955 ORTHO05D005965 3.4e-51 206.1 265 44.9
FvH4_5g21180 Fragaria vesca HOM05D004955 ORTHO05D005965 4.4e-51 205.7 281 42.3
MD06G1040100 Malus domestica HOM05D004955 ORTHO05D005965 4.4e-51 205.7 284 42.6
SEGI_00537 Sequoiadendron giganteum HOM05D004955 ORTHO05D005965 4.4e-51 205.7 276 45.7
TWI81G0724 Tripterygium wilfordii HOM05D004955 ORTHO05D005965 5.8e-51 205.3 282 44.0
EL10Ac5g12196 Beta vulgaris HOM05D004955 ORTHO05D005965 7.6e-51 204.9 285 43.9
SalBow6G1446 Salvia bowleyana HOM05D004955 ORTHO05D005965 7.6e-51 204.9 284 43.3
HanXRQChr14g0455871 Helianthus annuus HOM05D004955 ORTHO05D005965 9.9e-51 204.5 275 44.0
SGA_v2.0_scaffold18G08384 Striga asiatica HOM05D004955 ORTHO05D005965 9.9e-51 204.5 288 44.1
Dinv28916 Davidia involucrata HOM05D004955 ORTHO05D005965 1.3e-50 204.1 284 43.3
PGR031G1993 Punica granatum HOM05D004955 ORTHO05D005965 1.7e-50 203.8 278 45.0
Haze_08303 Corylus avellana HOM05D004955 ORTHO05D005965 2.2e-50 203.4 284 43.0
Sc07g0008830 Simmondsia chinensis HOM05D004955 ORTHO05D005965 2.2e-50 203.4 281 44.1
CSS0030337 Camellia sinensis var. sinensis HOM05D004955 ORTHO05D005965 2.9e-50 203.0 284 42.6
Glyma.20G095000 Glycine max HOM05D004955 ORTHO05D005965 3.8e-50 202.6 282 44.0
CSS0027312 Camellia sinensis var. sinensis HOM05D004955 ORTHO05D005965 4.9e-50 202.2 284 42.6
Haze_07894 Corylus avellana HOM05D004955 ORTHO05D005965 4.9e-50 202.2 284 44.0
Migut.E00798 Erythranthe guttata HOM05D004955 ORTHO05D005965 4.9e-50 202.2 281 44.1
Oeu039341.2 Olea europaea HOM05D004955 ORTHO05D005965 4.9e-50 202.2 282 43.3
Zm00001eb119880 Zea mays HOM05D004955 ORTHO05D005965 4.9e-50 202.2 282 43.3
Migut.E00912 Erythranthe guttata HOM05D004955 ORTHO05D005965 6.4e-50 201.8 281 44.1
FAN08G3652 Fragaria x ananassa HOM05D004955 ORTHO05D005965 6.4e-50 201.8 283 42.0
MCO08G085 Micromonas commoda HOM05D004955 ORTHO05D005965 6.4e-50 201.8 282 41.8
Lj3A396G10 Lonicera japonica HOM05D004955 ORTHO05D005965 8.4e-50 201.4 283 43.8
Dinv25184 Davidia involucrata HOM05D004955 ORTHO05D005965 1.1e-49 201.1 293 43.0
Glyma.07G096600 Glycine max HOM05D004955 ORTHO05D005965 1.1e-49 201.1 284 43.3
arahy.Tifrunner.gnm1.ann1.JVPY2N Arachis hypogaea HOM05D004955 ORTHO05D005965 1.4e-49 200.7 282 43.3
arahy.Tifrunner.gnm1.ann1.U6D9EY Arachis hypogaea HOM05D004955 ORTHO05D005965 1.4e-49 200.7 282 43.3
Cpa.g.sc39.114 Carica papaya HOM05D004955 ORTHO05D005965 1.4e-49 200.7 276 45.3
Cc05_g03300 Coffea canephora HOM05D004955 ORTHO05D005965 1.9e-49 200.3 284 42.6
GSVIVG01013229001 Vitis vinifera HOM05D004955 ORTHO05D005965 1.9e-49 200.3 284 43.7
CAN.G799.17 Capsicum annuum HOM05D004955 ORTHO05D005965 2.4e-49 199.9 287 42.2
FAN04G2254 Fragaria x ananassa HOM05D004955 ORTHO05D005965 2.4e-49 199.9 283 42.0
Sabra01G0115600 Salix brachista HOM05D004955 ORTHO05D005965 3.2e-49 199.5 284 42.6
GSVIVG01011242001 Vitis vinifera HOM05D004955 ORTHO05D005965 4.2e-49 199.1 284 43.7
DCAR_005602 Daucus carota HOM05D004955 ORTHO05D005965 2.1e-48 196.8 287 41.8
Nitab4.5_0002055g0140 Nicotiana tabacum HOM05D004955 ORTHO05D005965 2.7e-48 196.4 281 41.6
Nitab4.5_0006693g0050 Nicotiana tabacum HOM05D004955 ORTHO05D005965 7.8e-48 194.9 281 41.6
PGSC0003DMG400024224 Solanum tuberosum HOM05D004955 ORTHO05D005965 7.8e-48 194.9 287 42.5
Potri.001G146900 Populus trichocarpa HOM05D004955 ORTHO05D005965 1.0e-47 194.5 284 41.5
unitig_21.g20378 Utricularia gibba HOM05D004955 ORTHO05D005965 1.0e-47 194.5 272 44.1
HPP92_017500 Vanilla planifolia HOM05D004955 ORTHO05D005965 1.0e-47 194.5 283 42.0
FAN18G2324 Fragaria x ananassa HOM05D004955 ORTHO05D005965 1.3e-47 194.1 300 39.7
CSS0006893 Camellia sinensis var. sinensis HOM05D004955 ORTHO05D005965 1.7e-47 193.7 276 42.8
Sopen08g025850 Solanum pennellii HOM05D004955 ORTHO05D005965 1.7e-47 193.7 287 42.5
Os07g0195400 Oryza sativa ssp. japonica HOM05D004955 ORTHO05D005965 3.0e-47 193.0 280 42.1
Peaxi162Scf00084g00922 Petunia axillaris HOM05D004955 ORTHO05D005965 3.0e-47 193.0 283 41.3
Hund14430 Selenicereus undatus HOM05D004955 ORTHO05D005965 3.0e-47 193.0 297 40.7
FAN13G2236 Fragaria x ananassa HOM05D004955 ORTHO05D005965 1.5e-46 190.7 284 40.5
MD16G1269200 Malus domestica HOM05D004955 ORTHO05D005965 1.9e-46 190.3 291 40.5
Mapoly0074s0077 Marchantia polymorpha HOM05D004955 ORTHO05D005965 3.3e-46 189.5 283 38.9
Solyc08g077270.4 Solanum lycopersicum HOM05D004955 ORTHO05D005965 3.3e-46 189.5 287 41.8
CBR_g36832 Chara braunii HOM05D004955 ORTHO05D005965 1.6e-45 187.2 305 37.7
SHI01417 Sapria himalayana HOM05D004955 ORTHO05D005965 3.6e-45 186.0 272 41.5
BcaB08g36711 Brassica carinata HOM05D004955 ORTHO05D005965 8.1e-45 184.9 272 42.6
SMO174G0171 Selaginella moellendorffii HOM05D004955 ORTHO05D005965 8.1e-45 184.9 278 39.9
AUR62007230 Chenopodium quinoa HOM05D004955 ORTHO05D005965 5.3e-44 182.2 284 40.1
ClCG03G017340 Citrullus lanatus HOM05D004955 ORTHO05D005965 5.3e-44 182.2 283 40.6
AUR62001104 Chenopodium quinoa HOM05D004955 ORTHO05D005965 6.9e-44 181.8 284 40.5
AUR62018770 Chenopodium quinoa HOM05D004955 ORTHO05D005965 9.0e-44 181.4 281 42.0
MBI04_g29834_MAGBIO Magnolia biondii HOM05D004955 ORTHO05D005965 1.1e-41 174.5 284 40.8
Actinidia25945 Actinidia chinensis HOM05D004955 ORTHO05D005965 3.9e-39 166.0 276 39.1
Manes.15G172800 Manihot esculenta HOM05D004955 ORTHO05D005965 1.4e-36 157.5 243 39.5
Glyma.16G093333 Glycine max HOM05D004955 ORTHO05D005965 5.1e-31 139.0 204 41.2
SGA_v2.0_scaffold157G37418 Striga asiatica HOM05D004955 ORTHO05D005965 4.8e-29 132.5 214 39.3
Haze_08304 Corylus avellana HOM05D004955 ORTHO05D005965 5.0e-26 122.5 269 34.6
TPR.G6765 Trifolium pratense HOM05D004955 ORTHO05D005965 6.1e-24 115.5 274 33.9
Actinidia03393 Actinidia chinensis HOM05D004955 ORTHO05D005965 8.7e-23 111.7 123 48.8
CDE08G0647 Ceratophyllum demersum HOM05D004955 ORTHO05D005965 2.8e-21 106.7 127 44.9
Haze_08299 Corylus avellana HOM05D004955 ORTHO05D005965 6.3e-21 105.5 225 34.2
Haze_08302 Corylus avellana HOM05D004955 ORTHO05D005965 2.2e-18 97.1 179 38.5
BcaB01g01790 Brassica carinata HOM05D004955 ORTHO05D005965 1.9e-17 94.0 154 39.0
BcaB01g06395 Brassica carinata HOM05D004955 ORTHO05D005965 3.3e-14 83.2 102 42.2
Haze_08300 Corylus avellana HOM05D004955 ORTHO05D005965 1.5e-06 57.8 73 46.6


User provided reference genes

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