Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_26227 Corylus avellana HOM05D006266 ORTHO05D008016 0.0e+00 1352.4 680 100.0
Pp3c26_13090 Physcomitrium patens HOM05D006266 ORTHO05D008016 6.0e-169 598.6 584 51.0
CiPaw.02G052400 Carya illinoinensis HOM05D006266 ORTHO05D008016 1.3e-168 597.4 556 52.3
Psat5g289640 Pisum sativum HOM05D006266 ORTHO05D008016 1.2e-164 584.3 556 52.2
Potri.017G027500 Populus trichocarpa HOM05D006266 ORTHO05D008016 1.5e-164 583.9 556 52.0
SMO141G0282 Selaginella moellendorffii HOM05D006266 ORTHO05D008016 1.5e-164 583.9 555 51.4
Sabra17G0016500 Salix brachista HOM05D006266 ORTHO05D008016 2.0e-164 583.6 556 51.6
BcaC02g12401 Brassica carinata HOM05D006266 ORTHO05D008016 2.6e-164 583.2 556 51.8
Solyc12g021170.2 Solanum lycopersicum HOM05D006266 ORTHO05D008016 5.9e-164 582.0 553 51.7
Sopen12g011050 Solanum pennellii HOM05D006266 ORTHO05D008016 7.6e-164 581.6 553 51.5
Sp4g25480 Schrenkiella parvula HOM05D006266 ORTHO05D008016 1.7e-163 580.5 556 51.6
Atru.chr4.1256 Acer truncatum HOM05D006266 ORTHO05D008016 2.9e-163 579.7 556 51.1
CANSAT78G1968 Cannabis sativa HOM05D006266 ORTHO05D008016 1.9e-162 577.0 556 51.1
CARHR138470 Cardamine hirsuta HOM05D006266 ORTHO05D008016 1.9e-162 577.0 556 51.6
Dinv44175 Davidia involucrata HOM05D006266 ORTHO05D008016 1.9e-162 577.0 554 52.3
Glyma.15G029200 Glycine max HOM05D006266 ORTHO05D008016 2.5e-162 576.6 556 51.6
Manes.11G123500 Manihot esculenta HOM05D006266 ORTHO05D008016 4.2e-162 575.9 564 51.6
Ca_01251_v3 Cicer arietinum L. HOM05D006266 ORTHO05D008016 5.5e-162 575.5 556 51.1
Thhalv10001353m.g Eutrema salsugineum HOM05D006266 ORTHO05D008016 5.5e-162 575.5 556 51.6
HanXRQChr01g0023481 Helianthus annuus HOM05D006266 ORTHO05D008016 5.5e-162 575.5 556 50.9
Lsat_1_v5_gn_1_77821 Lactuca sativa HOM05D006266 ORTHO05D008016 5.5e-162 575.5 554 51.3
Aa31LG1G25150 Aethionema arabicum HOM05D006266 ORTHO05D008016 7.2e-162 575.1 556 50.9
Ciclev10019615m.g Citrus clementina HOM05D006266 ORTHO05D008016 1.6e-161 573.9 554 51.1
Lj3g0007796 Lotus japonicus HOM05D006266 ORTHO05D008016 2.1e-161 573.5 561 51.2
arahy.Tifrunner.gnm1.ann1.JU07H9 Arachis hypogaea HOM05D006266 ORTHO05D008016 2.7e-161 573.2 556 52.0
Carub.0004s2587 Capsella rubella HOM05D006266 ORTHO05D008016 2.7e-161 573.2 556 51.3
Prupe.1G197500 Prunus persica HOM05D006266 ORTHO05D008016 2.7e-161 573.2 625 47.2
arahy.Tifrunner.gnm1.ann1.D6UD48 Arachis hypogaea HOM05D006266 ORTHO05D008016 4.6e-161 572.4 556 51.8
TPR.G18865 Trifolium pratense HOM05D006266 ORTHO05D008016 4.6e-161 572.4 554 51.3
C04p04440 Brassica napus HOM05D006266 ORTHO05D008016 1.0e-160 571.2 556 50.5
BolC4t22077H Brassica oleracea HOM05D006266 ORTHO05D008016 1.0e-160 571.2 556 50.5
Phvul.005G153800 Phaseolus vulgaris HOM05D006266 ORTHO05D008016 1.0e-160 571.2 608 48.2
AL4G42140 Arabidopsis lyrata HOM05D006266 ORTHO05D008016 1.4e-160 570.9 556 50.7
A05p03740 Brassica napus HOM05D006266 ORTHO05D008016 1.4e-160 570.9 556 50.9
BraA05t19361Z Brassica rapa HOM05D006266 ORTHO05D008016 1.8e-160 570.5 556 50.9
Nitab4.5_0000505g0020 Nicotiana tabacum HOM05D006266 ORTHO05D008016 3.0e-160 569.7 553 50.8
Lalb_Chr14g0372511 Lupinus albus HOM05D006266 ORTHO05D008016 6.7e-160 568.5 554 51.1
PSO675G5931 Papaver somniferum HOM05D006266 ORTHO05D008016 6.7e-160 568.5 554 50.4
Aqoxy2G04160 Aquilegia oxysepala HOM05D006266 ORTHO05D008016 8.8e-160 568.2 586 49.5
Migut.G01347 Erythranthe guttata HOM05D006266 ORTHO05D008016 1.9e-159 567.0 574 49.0
Gorai.011G140700 Gossypium raimondii HOM05D006266 ORTHO05D008016 2.5e-159 566.6 554 50.2
THA.LOC104805138 Tarenaya hassleriana HOM05D006266 ORTHO05D008016 2.5e-159 566.6 556 50.2
Cfa026422 Carpinus fangiana HOM05D006266 ORTHO05D008016 3.3e-159 566.2 606 48.8
Oeu024477.1 Olea europaea HOM05D006266 ORTHO05D008016 3.3e-159 566.2 609 47.8
QL10p050722 Quercus lobata HOM05D006266 ORTHO05D008016 3.3e-159 566.2 580 49.1
Sed0000993 Sechium edule HOM05D006266 ORTHO05D008016 5.7e-159 565.5 561 49.7
ATR0743G015 Amborella trichopoda HOM05D006266 ORTHO05D008016 7.4e-159 565.1 555 49.7
AT2G43400 Arabidopsis thaliana HOM05D006266 ORTHO05D008016 7.4e-159 565.1 556 50.9
Nitab4.5_0001990g0030 Nicotiana tabacum HOM05D006266 ORTHO05D008016 7.4e-159 565.1 553 50.6
Eucgr.H00345 Eucalyptus grandis HOM05D006266 ORTHO05D008016 1.3e-158 564.3 553 50.6
Gohir.A10G139200 Gossypium hirsutum HOM05D006266 ORTHO05D008016 1.3e-158 564.3 554 50.5
Cfa015189 Carpinus fangiana HOM05D006266 ORTHO05D008016 1.7e-158 563.9 556 50.5
Gohir.D10G127600 Gossypium hirsutum HOM05D006266 ORTHO05D008016 1.7e-158 563.9 554 49.8
Sc19g0002870 Simmondsia chinensis HOM05D006266 ORTHO05D008016 8.2e-158 561.6 555 50.1
Thecc.04G175700 Theobroma cacao HOM05D006266 ORTHO05D008016 8.2e-158 561.6 557 49.9
VMungo1080G0961 Vigna mungo HOM05D006266 ORTHO05D008016 1.8e-157 560.5 634 46.7
GSVIVG01010835001 Vitis vinifera HOM05D006266 ORTHO05D008016 2.4e-157 560.1 556 49.5
TAR362G0699 Trochodendron aralioides HOM05D006266 ORTHO05D008016 3.1e-157 559.7 554 50.0
Duzib151G0889 Durio zibethinus HOM05D006266 ORTHO05D008016 4.1e-157 559.3 556 49.6
MSTRG.4284 Avicennia marina HOM05D006266 ORTHO05D008016 5.3e-157 558.9 553 49.7
Hund12414 Selenicereus undatus HOM05D006266 ORTHO05D008016 9.1e-157 558.1 591 48.6
FvH4_4g10960 Fragaria vesca HOM05D006266 ORTHO05D008016 1.5e-156 557.4 554 50.0
Cre02.g094300 Chlamydomonas reinhardtii HOM05D006266 ORTHO05D008016 4.5e-156 555.8 558 50.0
MBI07_g02893_MAGBIO Magnolia biondii HOM05D006266 ORTHO05D008016 1.0e-155 554.7 554 49.6
HPP92_022167 Vanilla planifolia HOM05D006266 ORTHO05D008016 8.5e-155 551.6 553 49.4
Nn7g37595 Nelumbo nucifera HOM05D006266 ORTHO05D008016 1.9e-154 550.4 561 48.1
ClCG05G007190 Citrullus lanatus HOM05D006266 ORTHO05D008016 4.2e-154 549.3 600 47.0
PGR142G3304 Punica granatum HOM05D006266 ORTHO05D008016 7.2e-154 548.5 579 47.2
ECA248G0977 Erigeron canadensis HOM05D006266 ORTHO05D008016 5.1e-152 542.3 527 50.3
CDE09G1029 Ceratophyllum demersum HOM05D006266 ORTHO05D008016 6.7e-152 542.0 564 48.4
SGA_v2.0_scaffold17G08154 Striga asiatica HOM05D006266 ORTHO05D008016 1.5e-151 540.8 609 46.0
DCAR_028531 Daucus carota HOM05D006266 ORTHO05D008016 2.6e-151 540.0 560 49.3
RcHm_v2.0_Chr4g0406421 Rosa chinensis HOM05D006266 ORTHO05D008016 4.4e-151 539.3 599 46.2
Actinidia27081 Actinidia chinensis HOM05D006266 ORTHO05D008016 1.1e-149 534.6 554 49.6
CAN.G51.9 Capsicum annuum HOM05D006266 ORTHO05D008016 1.1e-149 534.6 555 48.1
Peaxi162Scf00184g00418 Petunia axillaris HOM05D006266 ORTHO05D008016 1.1e-149 534.6 560 48.9
vmacro00635 Vaccinium macrocarpon HOM05D006266 ORTHO05D008016 5.3e-149 532.3 621 45.6
CsaV3_3G015950 Cucumis sativus L. HOM05D006266 ORTHO05D008016 7.0e-149 531.9 563 48.1
FAN17G0658 Fragaria x ananassa HOM05D006266 ORTHO05D008016 7.0e-149 531.9 554 48.7
MD04G1042900 Malus domestica HOM05D006266 ORTHO05D008016 7.0e-149 531.9 552 48.9
PRCOL_00003135 Prasinoderma coloniale HOM05D006266 ORTHO05D008016 3.4e-148 529.6 594 47.1
AagrBONN_evm.TU.Sc2ySwM_117.3933 Anthoceros agrestis HOM05D006266 ORTHO05D008016 1.0e-147 528.1 508 51.6
Haze_26951 Corylus avellana HOM05D006266 ORTHO05D008016 3.3e-143 513.1 569 48.2
Cpa.g.sc9.312 Carica papaya HOM05D006266 ORTHO05D008016 1.1e-141 508.1 561 47.6
Dinv44151 Davidia involucrata HOM05D006266 ORTHO05D008016 2.6e-140 503.4 486 51.9
Medtr2g099040 Medicago truncatula HOM05D006266 ORTHO05D008016 3.8e-139 499.6 512 49.2
Hma1.2p1_0324F.1_g125550 Hydrangea macrophylla HOM05D006266 ORTHO05D008016 2.1e-137 493.8 486 49.8
PSO017G5469 Papaver somniferum HOM05D006266 ORTHO05D008016 8.8e-136 488.4 554 45.7
Lj3C32G4 Lonicera japonica HOM05D006266 ORTHO05D008016 3.2e-130 469.9 558 45.2
Haze_01464 Corylus avellana HOM05D006266 ORTHO05D008016 1.2e-129 468.0 715 38.6
Lj3C1G0 Lonicera japonica HOM05D006266 ORTHO05D008016 1.2e-129 468.0 558 45.0
Rhsim09G0023000 Rhododendron simsii HOM05D006266 ORTHO05D008016 8.0e-129 465.3 771 36.2
Hma1.2p1_0324F.1_g125560 Hydrangea macrophylla HOM05D006266 ORTHO05D008016 1.8e-128 464.2 447 50.3
AUR62023848 Chenopodium quinoa HOM05D006266 ORTHO05D008016 2.6e-127 460.3 558 43.2
Mapoly0012s0124 Marchantia polymorpha HOM05D006266 ORTHO05D008016 4.1e-125 453.0 435 50.8
Cc03_g11970 Coffea canephora HOM05D006266 ORTHO05D008016 8.9e-112 408.7 383 50.9
MELO3C006793.2 Cucumis melo HOM05D006266 ORTHO05D008016 4.6e-108 396.4 458 45.6
AUR62002342 Chenopodium quinoa HOM05D006266 ORTHO05D008016 1.1e-96 358.6 454 41.6
Zm00001eb043590 Zea mays HOM05D006266 ORTHO05D008016 8.9e-96 355.5 354 51.1
Ah.07g202330 Amaranthus hybridus HOM05D006266 ORTHO05D008016 9.6e-74 282.3 348 43.1
SEGI_14637 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 4.9e-70 270.0 260 50.8
unitig_52.g17681 Utricularia gibba HOM05D006266 ORTHO05D008016 9.0e-64 249.2 438 35.4
Ah.07g202340 Amaranthus hybridus HOM05D006266 ORTHO05D008016 2.7e-52 211.1 208 50.0
Eucgr.L02537 Eucalyptus grandis HOM05D006266 ORTHO05D008016 9.7e-50 202.6 208 49.5
EL10Ac3g06005 Beta vulgaris HOM05D006266 ORTHO05D008016 1.3e-41 175.6 171 51.5
Sopen02g004370 Solanum pennellii HOM05D006266 ORTHO05D008016 1.3e-41 175.6 172 52.3
Cc03_g11980 Coffea canephora HOM05D006266 ORTHO05D008016 9.1e-40 169.5 175 50.3
FAN12G3251 Fragaria x ananassa HOM05D006266 ORTHO05D008016 1.5e-39 168.7 169 49.7
PGSC0003DMG400014944 Solanum tuberosum HOM05D006266 ORTHO05D008016 3.8e-38 164.1 182 45.1
CSS0026769 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 8.2e-33 146.4 112 57.1
SEGI_11902 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 2.9e-30 137.9 151 45.7
Os10g0516300 Oryza sativa ssp. japonica HOM05D006266 ORTHO05D008016 9.1e-24 116.3 121 46.3
SEGI_08796 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 3.5e-23 114.4 82 59.8
CSS0016449 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 1.9e-21 108.6 112 50.9
CSS0001057 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 6.3e-17 93.6 126 41.3
CSS0026763 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 5.9e-15 87.0 126 39.7
SEGI_29623 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 5.9e-15 87.0 76 53.9
MELO3C006791.2 Cucumis melo HOM05D005231 ORTHO05D006387 2.2e-14 85.1 98 42.9
CSS0001558 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 1.4e-11 75.9 109 37.6
CSS0004821 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 1.4e-11 75.9 109 37.6
CSS0016187 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 2.7e-07 61.6 77 39.0
arahy.Tifrunner.gnm1.ann1.QA6FBH Arachis hypogaea HOM05D006266 ORTHO05D008016 8.6e-06 56.6 43 62.8


User provided reference genes

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