Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_26211 Corylus avellana HOM05D006031 ORTHO05D007417 3.6e-137 491.5 236 100.0
Haze_27462 Corylus avellana HOM05D006031 ORTHO05D007417 3.6e-137 491.5 236 100.0
PSO566G0179 Papaver somniferum HOM05D006031 ORTHO05D007417 1.5e-42 177.2 234 42.7
Gorai.010G073700 Gossypium raimondii HOM05D006031 ORTHO05D007417 2.0e-42 176.8 230 43.0
PSO782G0755 Papaver somniferum HOM05D006031 ORTHO05D007417 2.0e-42 176.8 234 42.7
HanXRQChr17g0570151 Helianthus annuus HOM05D006031 ORTHO05D007417 2.6e-42 176.4 223 42.6
EL10Ac8g18430 Beta vulgaris HOM05D006031 ORTHO05D007417 4.4e-42 175.6 225 43.1
Gohir.D06G063200 Gossypium hirsutum HOM05D006031 ORTHO05D007417 5.7e-42 175.3 230 43.0
Lsat_1_v5_gn_4_6541 Lactuca sativa HOM05D006031 ORTHO05D007417 5.7e-42 175.3 232 41.8
Gohir.A06G064600 Gossypium hirsutum HOM05D006031 ORTHO05D007417 1.7e-41 173.7 230 42.6
MD02G1057400 Malus domestica HOM05D006031 ORTHO05D007417 1.7e-41 173.7 223 42.2
COL.COLO4_34809 Corchorus olitorius HOM05D006031 ORTHO05D007417 4.9e-41 172.2 230 40.9
TAR624G0502 Trochodendron aralioides HOM05D006031 ORTHO05D007417 8.3e-41 171.4 223 41.3
Os06g0162600 Oryza sativa ssp. japonica HOM05D006031 ORTHO05D007417 1.1e-40 171.0 225 41.3
Thecc.09G105700 Theobroma cacao HOM05D006031 ORTHO05D007417 1.1e-40 171.0 230 41.7
Ciclev10009448m.g Citrus clementina HOM05D006031 ORTHO05D007417 1.4e-40 170.6 234 41.0
AUR62021455 Chenopodium quinoa HOM05D006031 ORTHO05D007417 1.8e-40 170.2 227 41.4
Thhalv10026253m.g Eutrema salsugineum HOM05D006031 ORTHO05D007417 1.8e-40 170.2 225 41.8
PRCOL_00003743 Prasinoderma coloniale HOM05D006031 ORTHO05D007417 1.8e-40 170.2 223 42.6
Atru.chr7.1388 Acer truncatum HOM05D006031 ORTHO05D007417 2.4e-40 169.9 230 40.4
THA.LOC104804018 Tarenaya hassleriana HOM05D006031 ORTHO05D007417 2.4e-40 169.9 223 40.8
Aa31LG2G21560 Aethionema arabicum HOM05D006031 ORTHO05D007417 4.1e-40 169.1 223 41.3
TWI63G0954 Tripterygium wilfordii HOM05D006031 ORTHO05D007417 4.1e-40 169.1 223 39.9
Aqoxy7G01527 Aquilegia oxysepala HOM05D006031 ORTHO05D007417 5.4e-40 168.7 223 42.2
Glyma.01G145300 Glycine max HOM05D006031 ORTHO05D007417 5.4e-40 168.7 229 38.9
Carub.0007s1181 Capsella rubella HOM05D006031 ORTHO05D007417 7.0e-40 168.3 223 41.3
Cre08.g384700 Chlamydomonas reinhardtii HOM05D006031 ORTHO05D007417 7.0e-40 168.3 223 40.8
Hma1.2p1_0945F.1_g240050 Hydrangea macrophylla HOM05D006031 ORTHO05D007417 7.0e-40 168.3 223 42.2
C01p10630 Brassica napus HOM05D006031 ORTHO05D007417 9.1e-40 167.9 223 42.6
FvH4_1g05640 Fragaria vesca HOM05D006031 ORTHO05D007417 9.1e-40 167.9 223 40.8
C07p56460 Brassica napus HOM05D006031 ORTHO05D007417 1.2e-39 167.5 223 41.3
MBI04_g14932_MAGBIO Magnolia biondii HOM05D006031 ORTHO05D007417 1.2e-39 167.5 223 42.6
RcHm_v2.0_Chr2g0091271 Rosa chinensis HOM05D006031 ORTHO05D007417 1.2e-39 167.5 223 40.8
Hund26230 Selenicereus undatus HOM05D006031 ORTHO05D007417 1.2e-39 167.5 223 41.7
Solyc12g006030.2 Solanum lycopersicum HOM05D006031 ORTHO05D007417 1.2e-39 167.5 233 39.9
CiPaw.03G228000 Carya illinoinensis HOM05D006031 ORTHO05D007417 1.6e-39 167.2 223 41.3
ECA234G3380 Erigeron canadensis HOM05D006031 ORTHO05D007417 1.6e-39 167.2 222 41.0
FAN23G2797 Fragaria x ananassa HOM05D006031 ORTHO05D007417 1.6e-39 167.2 223 40.8
Dinv41637 Davidia involucrata HOM05D006031 ORTHO05D007417 2.0e-39 166.8 223 42.6
Potri.018G083800 Populus trichocarpa HOM05D006031 ORTHO05D007417 2.0e-39 166.8 223 42.2
ATR0315G117 Amborella trichopoda HOM05D006031 ORTHO05D007417 2.7e-39 166.4 223 40.8
AL7G23660 Arabidopsis lyrata HOM05D006031 ORTHO05D007417 3.5e-39 166.0 223 41.3
A01p09080 Brassica napus HOM05D006031 ORTHO05D007417 3.5e-39 166.0 223 40.8
BolC7t46125H Brassica oleracea HOM05D006031 ORTHO05D007417 3.5e-39 166.0 223 40.8
BraA01t00856Z Brassica rapa HOM05D006031 ORTHO05D007417 3.5e-39 166.0 223 40.8
Nitab4.5_0000952g0030 Nicotiana tabacum HOM05D006031 ORTHO05D007417 3.5e-39 166.0 233 39.9
Sopen12g002000 Solanum pennellii HOM05D006031 ORTHO05D007417 3.5e-39 166.0 233 39.9
FAN26G3395 Fragaria x ananassa HOM05D006031 ORTHO05D007417 4.5e-39 165.6 227 40.1
Sabra18G0072100 Salix brachista HOM05D006031 ORTHO05D007417 4.5e-39 165.6 223 41.3
VMungo0464G0135 Vigna mungo HOM05D006031 ORTHO05D007417 4.5e-39 165.6 223 39.5
BcaC09g51657 Brassica carinata HOM05D006031 ORTHO05D007417 5.9e-39 165.2 223 42.2
A03p58440 Brassica napus HOM05D006031 ORTHO05D007417 5.9e-39 165.2 223 40.4
BolC1t01025H Brassica oleracea HOM05D006031 ORTHO05D007417 5.9e-39 165.2 223 42.2
CANSAT56G1289 Cannabis sativa HOM05D006031 ORTHO05D007417 5.9e-39 165.2 223 41.3
QL02p044744 Quercus lobata HOM05D006031 ORTHO05D007417 5.9e-39 165.2 223 41.7
BraA03t14904Z Brassica rapa HOM05D006031 ORTHO05D007417 7.7e-39 164.9 223 40.4
Eucgr.C03802 Eucalyptus grandis HOM05D006031 ORTHO05D007417 7.7e-39 164.9 223 38.6
GSVIVG01015348001 Vitis vinifera HOM05D006031 ORTHO05D007417 7.7e-39 164.9 223 40.8
Zm00001eb271370 Zea mays HOM05D006031 ORTHO05D007417 7.7e-39 164.9 223 41.7
AT4G28830 Arabidopsis thaliana HOM05D006031 ORTHO05D007417 1.0e-38 164.5 223 40.8
BcaNung01361 Brassica carinata HOM05D006031 ORTHO05D007417 1.0e-38 164.5 223 40.8
AUR62010942 Chenopodium quinoa HOM05D006031 ORTHO05D007417 1.0e-38 164.5 226 40.7
Ca_25548_v3 Cicer arietinum L. HOM05D006031 ORTHO05D007417 1.0e-38 164.5 223 39.5
Cc06_g10050 Coffea canephora HOM05D006031 ORTHO05D007417 1.0e-38 164.5 223 39.9
MELO3C004569.2 Cucumis melo HOM05D006031 ORTHO05D007417 1.0e-38 164.5 223 39.5
Medtr1g035260 Medicago truncatula HOM05D006031 ORTHO05D007417 1.0e-38 164.5 223 39.9
SGA_v2.0_scaffold387G50523 Striga asiatica HOM05D006031 ORTHO05D007417 1.0e-38 164.5 224 39.7
TPR.G34905 Trifolium pratense HOM05D006031 ORTHO05D007417 1.0e-38 164.5 223 39.9
Cpa.g.sc12.30 Carica papaya HOM05D006031 ORTHO05D007417 1.3e-38 164.1 233 42.1
CDE02G2180 Ceratophyllum demersum HOM05D006031 ORTHO05D007417 1.7e-38 163.7 229 38.9
Lalb_Chr22g0352651 Lupinus albus HOM05D006031 ORTHO05D007417 1.7e-38 163.7 223 39.9
Migut.K00493 Erythranthe guttata HOM05D006031 ORTHO05D007417 2.3e-38 163.3 223 40.8
FAN26G0948 Fragaria x ananassa HOM05D006031 ORTHO05D007417 2.3e-38 163.3 223 40.4
BcaC06g32602 Brassica carinata HOM05D006031 ORTHO05D007417 2.9e-38 162.9 223 40.4
Nn2g11655 Nelumbo nucifera HOM05D006031 ORTHO05D007417 3.8e-38 162.5 223 39.5
Nitab4.5_0000010g0020 Nicotiana tabacum HOM05D006031 ORTHO05D007417 3.8e-38 162.5 233 39.5
CAN.G478.5 Capsicum annuum HOM05D006031 ORTHO05D007417 8.6e-38 161.4 233 38.2
Manes.03G024000 Manihot esculenta HOM05D006031 ORTHO05D007417 8.6e-38 161.4 230 39.1
Sp7g26830 Schrenkiella parvula HOM05D006031 ORTHO05D007417 8.6e-38 161.4 223 40.4
Ah.09g230920 Amaranthus hybridus HOM05D006031 ORTHO05D007417 1.1e-37 161.0 202 42.6
Phvul.004G168000 Phaseolus vulgaris HOM05D006031 ORTHO05D007417 1.1e-37 161.0 223 39.5
CsaV3_2G002120 Cucumis sativus L. HOM05D006031 ORTHO05D007417 1.5e-37 160.6 223 39.0
arahy.Tifrunner.gnm1.ann1.4UU729 Arachis hypogaea HOM05D006031 ORTHO05D007417 1.9e-37 160.2 223 38.1
Actinidia20400 Actinidia chinensis HOM05D006031 ORTHO05D007417 2.5e-37 159.8 223 40.8
PGR102G2811 Punica granatum HOM05D006031 ORTHO05D007417 2.5e-37 159.8 230 38.7
arahy.Tifrunner.gnm1.ann1.P4D2XC Arachis hypogaea HOM05D006031 ORTHO05D007417 3.3e-37 159.5 223 38.1
CARHR236620 Cardamine hirsuta HOM05D006031 ORTHO05D007417 4.3e-37 159.1 221 39.8
Sc18g0001360 Simmondsia chinensis HOM05D006031 ORTHO05D007417 5.6e-37 158.7 223 40.4
Duzib150G0325 Durio zibethinus HOM05D006031 ORTHO05D007417 7.2e-37 158.3 228 40.4
SalBow3G0984 Salvia bowleyana HOM05D006031 ORTHO05D007417 7.2e-37 158.3 228 40.4
SMO164G0018 Selaginella moellendorffii HOM05D006031 ORTHO05D007417 1.6e-36 157.1 223 40.8
SMO304G0145 Selaginella moellendorffii HOM05D006031 ORTHO05D007417 2.1e-36 156.8 223 40.8
ClCG11G002340 Citrullus lanatus HOM05D006031 ORTHO05D007417 8.0e-36 154.8 244 36.9
unitig_62.g23476 Utricularia gibba HOM05D006031 ORTHO05D007417 2.3e-35 153.3 232 37.5
AagrBONN_evm.TU.Sc2ySwM_228.3645 Anthoceros agrestis HOM05D006031 ORTHO05D007417 3.0e-35 152.9 223 38.6
Mapoly0136s0020 Marchantia polymorpha HOM05D006031 ORTHO05D007417 5.2e-35 152.1 223 39.0
Pp3c6_12910 Physcomitrium patens HOM05D006031 ORTHO05D007417 8.9e-35 151.4 223 38.1
Peaxi162Scf00539g00717 Petunia axillaris HOM05D006031 ORTHO05D007417 2.0e-34 150.2 233 38.2
vmacro10877 Vaccinium macrocarpon HOM05D006031 ORTHO05D007417 2.0e-34 150.2 221 40.3
HPP92_005270 Vanilla planifolia HOM05D006031 ORTHO05D007417 2.0e-34 150.2 228 36.4
MCO05G480 Micromonas commoda HOM05D006031 ORTHO05D007417 6.4e-33 145.2 223 36.8
CSS0004856 Camellia sinensis var. sinensis HOM05D006031 ORTHO05D007417 1.4e-32 144.1 223 36.3
CBR_g49195 Chara braunii HOM05D005459 ORTHO05D006751 4.1e-32 142.5 181 45.3
ClCG06G015420 Citrullus lanatus HOM05D006031 ORTHO05D007417 4.1e-32 142.5 238 36.6
Actinidia09434 Actinidia chinensis HOM05D006031 ORTHO05D007417 7.0e-32 141.7 226 36.3
Cfa003225 Carpinus fangiana HOM05D006031 ORTHO05D007417 2.3e-30 136.7 182 42.3
Hma1.2p1_0945F.1_g240060 Hydrangea macrophylla HOM05D006031 ORTHO05D007417 3.0e-30 136.3 182 41.2
Haze_25783 Corylus avellana HOM05D006031 ORTHO05D007417 9.5e-29 131.3 199 39.2
Dinv41633 Davidia involucrata HOM05D006031 ORTHO05D007417 3.1e-27 126.3 182 39.6
Prupe.7G225500 Prunus persica HOM05D006031 ORTHO05D007417 8.9e-27 124.8 198 38.4
Psat1g044640 Pisum sativum HOM05D006031 ORTHO05D007417 2.9e-25 119.8 180 37.8
MSTRG.26365 Avicennia marina HOM05D006031 ORTHO05D007417 4.9e-25 119.0 179 39.1
PGSC0003DMG400013889 Solanum tuberosum HOM05D000011 ORTHO05D007417 1.9e-24 117.1 210 34.3
Lj2g0026722 Lotus japonicus HOM05D006031 ORTHO05D007417 3.2e-24 116.3 176 36.9
Rhsim05G0043800 Rhododendron simsii HOM05D006031 ORTHO05D000070 6.6e-22 108.6 246 30.9
Sed0012983 Sechium edule HOM05D006031 ORTHO05D007417 4.3e-21 105.9 151 38.4
Zm00001eb271350 Zea mays HOM05D006031 ORTHO05D007417 3.4e-18 96.3 112 43.8
Zm00001eb442390 Zea mays HOM05D006031 ORTHO05D007417 3.4e-18 96.3 112 43.8
PRCOL_00005480 Prasinoderma coloniale HOM05D006031 ORTHO05D007417 4.4e-18 95.9 207 31.4
arahy.Tifrunner.gnm1.ann1.PEIA6U Arachis hypogaea HOM05D006031 ORTHO05D007417 6.0e-15 85.5 167 32.3
Lj4A429T15 Lonicera japonica HOM05D006031 ORTHO05D007417 4.3e-13 79.3 95 42.1
DCAR_012059 Daucus carota HOM05D006031 ORTHO05D007417 6.8e-11 72.0 124 35.5
SEGI_07643 Sequoiadendron giganteum HOM05D006031 ORTHO05D007417 4.6e-07 59.3 66 47.0
AUR62044225 Chenopodium quinoa HOM05D003603 ORTHO05D004186 3.9e-06 56.2 59 45.8
BcaC09g51665 Brassica carinata HOM05D006031 ORTHO05D007417 5.1e-06 55.8 82 37.8


User provided reference genes

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