Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_26161 Corylus avellana HOM05D004325 ORTHO05D005470 3.2e-195 684.9 342 100.0
Ca_00969_v3 Cicer arietinum L. HOM05D004325 ORTHO05D005470 1.5e-30 137.9 171 42.7
Glyma.09G034400 Glycine max HOM05D004325 ORTHO05D005470 7.3e-30 135.6 170 42.9
arahy.Tifrunner.gnm1.ann1.NK7FC1 Arachis hypogaea HOM05D004325 ORTHO05D005470 1.2e-29 134.8 169 42.6
PSO832G3679 Papaver somniferum HOM05D004325 ORTHO05D005470 1.2e-29 134.8 171 42.7
Lj6g0013793 Lotus japonicus HOM05D004325 ORTHO05D005470 1.6e-29 134.4 170 42.4
PSO724G0368 Papaver somniferum HOM05D004325 ORTHO05D005470 1.6e-29 134.4 171 42.1
Sc25g0003210 Simmondsia chinensis HOM05D004325 ORTHO05D005470 3.6e-29 133.3 171 43.3
Glyma.15G139100 Glycine max HOM05D004325 ORTHO05D005470 4.7e-29 132.9 170 42.4
TPR.G30807 Trifolium pratense HOM05D004325 ORTHO05D005470 4.7e-29 132.9 171 42.1
ECA233G2476 Erigeron canadensis HOM05D004325 ORTHO05D005470 6.2e-29 132.5 169 41.4
arahy.Tifrunner.gnm1.ann1.H88EK8 Arachis hypogaea HOM05D004325 ORTHO05D005470 8.1e-29 132.1 169 42.0
arahy.Tifrunner.gnm1.ann1.RG9184 Arachis hypogaea HOM05D004325 ORTHO05D005470 8.1e-29 132.1 169 42.0
Phvul.006G119000 Phaseolus vulgaris HOM05D004325 ORTHO05D005470 8.1e-29 132.1 166 43.4
PSO063G1209 Papaver somniferum HOM05D004325 ORTHO05D005470 1.1e-28 131.7 171 42.1
PSO421G0271 Papaver somniferum HOM05D004325 ORTHO05D005470 1.4e-28 131.3 170 41.2
COL.COLO4_34588 Corchorus olitorius HOM05D004325 ORTHO05D005470 1.8e-28 131.0 170 40.6
Sed0016650 Sechium edule HOM05D004325 ORTHO05D005470 1.8e-28 131.0 173 41.0
CANSAT78G0850 Cannabis sativa HOM05D004325 ORTHO05D005470 2.3e-28 130.6 171 40.4
Migut.N00036 Erythranthe guttata HOM05D004325 ORTHO05D005470 2.3e-28 130.6 172 41.3
Lalb_Chr12g0200831 Lupinus albus HOM05D004325 ORTHO05D005470 2.3e-28 130.6 169 40.2
Cpa.g.sc9.38 Carica papaya HOM05D004325 ORTHO05D005470 3.1e-28 130.2 166 41.6
Cc03_g00680 Coffea canephora HOM05D004325 ORTHO05D005470 3.1e-28 130.2 170 41.2
Duzib151G0878 Durio zibethinus HOM05D004325 ORTHO05D005470 3.1e-28 130.2 169 40.8
Psat1g162400 Pisum sativum HOM05D004325 ORTHO05D005470 5.2e-28 129.4 171 40.9
CDE01G0033 Ceratophyllum demersum HOM05D004325 ORTHO05D005470 6.8e-28 129.0 170 42.9
Medtr2g033830 Medicago truncatula HOM05D004325 ORTHO05D005470 6.8e-28 129.0 172 41.9
Thecc.04G303800 Theobroma cacao HOM05D004325 ORTHO05D005470 6.8e-28 129.0 170 40.6
VMungo0540G0568 Vigna mungo HOM05D004325 ORTHO05D005470 6.8e-28 129.0 168 41.7
Actinidia13352 Actinidia chinensis HOM05D004325 ORTHO05D005470 8.9e-28 128.6 169 41.4
Gohir.A01G034900 Gossypium hirsutum HOM05D004325 ORTHO05D005470 8.9e-28 128.6 170 40.6
Lsat_1_v5_gn_1_117981 Lactuca sativa HOM05D004325 ORTHO05D005470 8.9e-28 128.6 161 41.6
MBI19_g03261_MAGBIO Magnolia biondii HOM05D004325 ORTHO05D005470 8.9e-28 128.6 166 42.2
PGR004G2019 Punica granatum HOM05D004325 ORTHO05D005470 8.9e-28 128.6 170 41.8
TAR362G0217 Trochodendron aralioides HOM05D004325 ORTHO05D005470 8.9e-28 128.6 170 41.2
Duzib052G1161 Durio zibethinus HOM05D004325 ORTHO05D005470 1.2e-27 128.3 170 39.4
Eucgr.E02007 Eucalyptus grandis HOM05D004325 ORTHO05D005470 1.2e-27 128.3 168 41.7
SEGI_09014 Sequoiadendron giganteum HOM05D004325 ORTHO05D005470 1.2e-27 128.3 171 39.2
CSS0027180 Camellia sinensis var. sinensis HOM05D004325 ORTHO05D005470 1.5e-27 127.9 169 40.2
Ciclev10005911m.g Citrus clementina HOM05D004325 ORTHO05D005470 1.5e-27 127.9 170 40.6
CARHR287830 Cardamine hirsuta HOM05D004325 ORTHO05D005470 2.0e-27 127.5 175 39.4
Peaxi162Scf00228g00059 Petunia axillaris HOM05D004325 ORTHO05D005470 2.0e-27 127.5 169 41.4
Hund11985 Selenicereus undatus HOM05D004325 ORTHO05D005470 2.0e-27 127.5 171 41.5
TWI73G0086 Tripterygium wilfordii HOM05D004325 ORTHO05D005470 2.0e-27 127.5 172 38.4
Thhalv10004957m.g Eutrema salsugineum HOM05D004325 ORTHO05D005470 2.6e-27 127.1 171 39.2
AL8G23260 Arabidopsis lyrata HOM05D004325 ORTHO05D005470 3.4e-27 126.7 171 39.8
AT5G49510 Arabidopsis thaliana HOM05D004325 ORTHO05D005470 3.4e-27 126.7 171 39.8
CSS0047955 Camellia sinensis var. sinensis HOM05D004325 ORTHO05D005470 4.4e-27 126.3 168 39.3
Potri.008G103400 Populus trichocarpa HOM05D004325 ORTHO05D005470 4.4e-27 126.3 170 40.0
PRCOL_00000812 Prasinoderma coloniale HOM05D004325 ORTHO05D005470 4.4e-27 126.3 159 41.5
CsaV3_3G015280 Cucumis sativus L. HOM05D004325 ORTHO05D005470 5.8e-27 125.9 171 40.4
Sabra08G0078100 Salix brachista HOM05D004325 ORTHO05D005470 5.8e-27 125.9 161 41.6
Sed0024233 Sechium edule HOM05D004325 ORTHO05D005470 5.8e-27 125.9 172 39.5
Hund03133 Selenicereus undatus HOM05D004325 ORTHO05D005470 5.8e-27 125.9 164 40.9
TAR633G1272 Trochodendron aralioides HOM05D004325 ORTHO05D005470 5.8e-27 125.9 170 40.0
Haze_01324 Corylus avellana HOM05D004325 ORTHO05D005470 7.5e-27 125.6 170 40.0
Cfa015290 Carpinus fangiana HOM05D004325 ORTHO05D005470 9.9e-27 125.2 170 39.4
Dinv44270 Davidia involucrata HOM05D004325 ORTHO05D005470 9.9e-27 125.2 168 39.9
HanXRQChr17g0569361 Helianthus annuus HOM05D004325 ORTHO05D005470 9.9e-27 125.2 169 38.5
MD13G1150800 Malus domestica HOM05D004325 ORTHO05D005470 9.9e-27 125.2 167 40.1
MD16G1151300 Malus domestica HOM05D004325 ORTHO05D005470 9.9e-27 125.2 167 40.1
ATR0693G272 Amborella trichopoda HOM05D004325 ORTHO05D005470 1.3e-26 124.8 166 41.6
AagrBONN_evm.TU.Sc2ySwM_344.4436 Anthoceros agrestis HOM05D004325 ORTHO05D005470 1.3e-26 124.8 167 38.3
Eucgr.D01575 Eucalyptus grandis HOM05D004325 ORTHO05D005470 1.3e-26 124.8 168 41.1
AUR62016229 Chenopodium quinoa HOM05D004325 ORTHO05D005470 1.7e-26 124.4 170 39.4
ClCG05G006650 Citrullus lanatus HOM05D004325 ORTHO05D005470 1.7e-26 124.4 171 39.2
Gohir.D01G023556 Gossypium hirsutum HOM05D004325 ORTHO05D005470 1.7e-26 124.4 170 40.0
Gorai.002G030800 Gossypium raimondii HOM05D004325 ORTHO05D005470 1.7e-26 124.4 170 40.0
Hma1.2p1_0013F.1_g008360 Hydrangea macrophylla HOM05D004325 ORTHO05D005470 1.7e-26 124.4 168 40.5
Potri.010G147600 Populus trichocarpa HOM05D004325 ORTHO05D005470 1.7e-26 124.4 170 40.0
Zm00001eb136920 Zea mays HOM05D004325 ORTHO05D005470 1.7e-26 124.4 166 39.8
AUR62039261 Chenopodium quinoa HOM05D004325 ORTHO05D005470 2.2e-26 124.0 170 39.4
Os12g0562900 Oryza sativa ssp. japonica HOM05D004325 ORTHO05D005470 2.2e-26 124.0 166 39.8
Manes.03G206300 Manihot esculenta HOM05D004325 ORTHO05D005470 2.9e-26 123.6 170 38.8
unitig_0.g2580 Utricularia gibba HOM05D004325 ORTHO05D005470 2.9e-26 123.6 161 41.0
Atru.chr4.3046 Acer truncatum HOM05D004325 ORTHO05D005470 3.7e-26 123.2 168 38.7
MSTRG.24825 Avicennia marina HOM05D004325 ORTHO05D005470 3.7e-26 123.2 168 39.3
Prupe.1G115000 Prunus persica HOM05D004325 ORTHO05D005470 3.7e-26 123.2 167 39.5
Solyc05g053390.4 Solanum lycopersicum HOM05D004325 ORTHO05D005470 3.7e-26 123.2 166 40.4
Zm00001eb028520 Zea mays HOM05D004325 ORTHO05D005470 3.7e-26 123.2 166 39.8
BraA09t36122Z Brassica rapa HOM05D004325 ORTHO05D005470 4.9e-26 122.9 171 38.6
Carub.0008s0936 Capsella rubella HOM05D004325 ORTHO05D005470 4.9e-26 122.9 171 38.6
BcaC04g23736 Brassica carinata HOM05D004325 ORTHO05D005470 6.4e-26 122.5 171 38.6
C09p05230 Brassica napus HOM05D004325 ORTHO05D005470 6.4e-26 122.5 171 38.6
Sp2g19810 Schrenkiella parvula HOM05D004325 ORTHO05D005470 6.4e-26 122.5 171 38.6
SpUn0021_0040 Schrenkiella parvula HOM05D004325 ORTHO05D005470 6.4e-26 122.5 171 38.6
RcHm_v2.0_Chr4g0425791 Rosa chinensis HOM05D004325 ORTHO05D005470 8.3e-26 122.1 170 38.8
A09p04850 Brassica napus HOM05D004325 ORTHO05D005470 1.1e-25 121.7 171 38.6
Rhsim02G0002800 Rhododendron simsii HOM05D004325 ORTHO05D005470 1.1e-25 121.7 168 40.5
Sopen05g031900 Solanum pennellii HOM05D004325 ORTHO05D005470 1.4e-25 121.3 166 39.8
A06p38330 Brassica napus HOM05D004325 ORTHO05D005470 1.9e-25 120.9 171 38.0
C07p39920 Brassica napus HOM05D004325 ORTHO05D005470 1.9e-25 120.9 171 38.0
BolC7t44524H Brassica oleracea HOM05D004325 ORTHO05D005470 1.9e-25 120.9 171 38.0
BraA06t26747Z Brassica rapa HOM05D004325 ORTHO05D005470 1.9e-25 120.9 171 38.0
Pp3c8_18130 Physcomitrium patens HOM05D004325 ORTHO05D005470 1.9e-25 120.9 167 41.9
SMO116G0307 Selaginella moellendorffii HOM05D004325 ORTHO05D005470 1.9e-25 120.9 166 39.2
FvH4_4g20250 Fragaria vesca HOM05D004325 ORTHO05D005470 2.4e-25 120.6 171 38.0
THA.LOC104827099 Tarenaya hassleriana HOM05D004325 ORTHO05D005470 2.4e-25 120.6 168 38.1
Ah.13g071390 Amaranthus hybridus HOM05D004325 ORTHO05D005470 3.2e-25 120.2 169 37.9
Cre06.g261650 Chlamydomonas reinhardtii HOM05D004325 ORTHO05D005470 3.2e-25 120.2 166 38.0
Nitab4.5_0000647g0250 Nicotiana tabacum HOM05D004325 ORTHO05D005470 3.2e-25 120.2 166 39.8
MCO08G322 Micromonas commoda HOM05D004325 ORTHO05D005470 4.1e-25 119.8 163 36.8
Aqoxy3G01635 Aquilegia oxysepala HOM05D004325 ORTHO05D005470 5.4e-25 119.4 171 39.2
BcaB04g19615 Brassica carinata HOM05D004325 ORTHO05D005470 5.4e-25 119.4 175 37.7
Nitab4.5_0004165g0020 Nicotiana tabacum HOM05D004325 ORTHO05D005470 5.4e-25 119.4 166 39.2
PGSC0003DMG400027209 Solanum tuberosum HOM05D004325 ORTHO05D005470 9.2e-25 118.6 166 39.2
TPR.G28959 Trifolium pratense HOM05D004325 ORTHO05D005470 9.2e-25 118.6 140 44.3
THA.LOC104802708 Tarenaya hassleriana HOM05D004325 ORTHO05D005470 1.6e-24 117.9 170 38.2
CAN.G945.3 Capsicum annuum HOM05D004325 ORTHO05D005470 3.5e-24 116.7 135 45.2
vmacro15176 Vaccinium macrocarpon HOM05D004325 ORTHO05D005470 7.8e-24 115.5 142 44.4
Aa31LG11G8140 Aethionema arabicum HOM05D004325 ORTHO05D005470 1.3e-23 114.8 189 37.0
Mapoly0057s0039 Marchantia polymorpha HOM05D004325 ORTHO05D005470 2.3e-23 114.0 161 39.1
FAN12G3971 Fragaria x ananassa HOM05D004325 ORTHO05D005470 3.9e-23 113.2 204 33.8
HPP92_027563 Vanilla planifolia HOM05D004325 ORTHO05D005470 3.9e-23 113.2 176 36.4
Nn3g21742 Nelumbo nucifera HOM05D004325 ORTHO05D005470 5.1e-23 112.8 166 38.0
SGA_v2.0_scaffold528G52737 Striga asiatica HOM05D004325 ORTHO05D005470 5.1e-23 112.8 193 34.7
Nitab4.5_0000177g0050 Nicotiana tabacum HOM05D004325 ORTHO05D005470 6.6e-23 112.5 180 37.8
Nitab4.5_0000891g0010 Nicotiana tabacum HOM05D004325 ORTHO05D005470 6.6e-23 112.5 180 37.8
TWI09G1034 Tripterygium wilfordii HOM05D004325 ORTHO05D005470 6.6e-23 112.5 168 36.9
GSVIVG01034969001 Vitis vinifera HOM05D004325 ORTHO05D005470 4.3e-22 109.8 130 44.6
FAN07G0536 Fragaria x ananassa HOM05D004325 ORTHO05D005470 5.6e-22 109.4 213 32.4
Lj3A833G34 Lonicera japonica HOM05D004325 ORTHO05D005470 7.3e-22 109.0 152 38.8
Oeu001162.1 Olea europaea HOM05D004325 ORTHO05D005470 9.5e-22 108.6 132 41.7
Eucgr.E01999 Eucalyptus grandis HOM05D004325 ORTHO05D005470 2.8e-21 107.1 164 38.4
Sabra10G0113800 Salix brachista HOM05D004325 ORTHO05D005470 3.6e-21 106.7 214 32.2
CiPaw.01G136700 Carya illinoinensis HOM05D004325 ORTHO05D005470 8.1e-21 105.5 130 43.1
SalBow5G2618 Salvia bowleyana HOM05D004325 ORTHO05D005470 1.4e-20 104.8 147 39.5
Eucgr.E01982 Eucalyptus grandis HOM05D004325 ORTHO05D005470 3.1e-20 103.6 127 44.1
Lalb_Chr13g0298551 Lupinus albus HOM05D004325 ORTHO05D005470 8.9e-20 102.1 131 43.5
EL10Ac3g05527 Beta vulgaris HOM05D004325 ORTHO05D005470 1.5e-19 101.3 147 38.1
BolC9t53449H Brassica oleracea HOM05D004325 ORTHO05D005470 7.6e-19 99.0 231 28.6
QL06p012738 Quercus lobata HOM05D004325 ORTHO05D005470 7.1e-17 92.4 95 47.4
Eucgr.D01580 Eucalyptus grandis HOM05D004325 ORTHO05D005470 1.2e-16 91.7 79 54.4
Sopen01g024490 Solanum pennellii HOM05D004325 ORTHO05D005470 3.9e-15 86.7 113 41.6
CBR_g12436 Chara braunii HOM05D004325 ORTHO05D005470 6.6e-15 85.9 103 38.8
Eucgr.D01586 Eucalyptus grandis HOM05D004325 ORTHO05D005470 1.5e-14 84.7 104 43.3
Eucgr.D01581 Eucalyptus grandis HOM05D004325 ORTHO05D005470 1.9e-14 84.3 77 53.2
Haze_26999 Corylus avellana HOM05D005799 ORTHO05D007150 9.6e-14 82.0 76 50.0
MELO3C006723.2 Cucumis melo HOM05D004325 ORTHO05D005470 8.1e-13 79.0 123 35.0
CDE12G0495 Ceratophyllum demersum HOM05D004325 ORTHO05D005470 1.1e-12 78.6 114 39.5
Haze_26998 Corylus avellana HOM05D005799 ORTHO05D007150 1.8e-12 77.8 76 47.4
Eucgr.D01598 Eucalyptus grandis HOM05D004325 ORTHO05D005470 4.0e-12 76.6 106 41.5
Glyma.17G035301 Glycine max HOM05D004325 ORTHO05D005470 9.9e-11 72.0 97 41.2
Eucgr.D01577 Eucalyptus grandis HOM05D004325 ORTHO05D005470 6.4e-10 69.3 90 42.2
HPP92_017247 Vanilla planifolia HOM05D004325 ORTHO05D005470 2.4e-09 67.4 113 34.5
Glyma.07G238200 Glycine max HOM05D004325 ORTHO05D005470 5.4e-09 66.2 72 47.2
CiPaw.02G073600 Carya illinoinensis HOM05D004325 ORTHO05D005470 7.1e-09 65.9 177 27.1
Dinv15146 Davidia involucrata HOM05D004325 ORTHO05D005470 1.6e-08 64.7 109 36.7
MSTRG.3849 Avicennia marina HOM05D004325 ORTHO05D005470 2.1e-08 64.3 114 30.7
Actinidia31558 Actinidia chinensis HOM05D004325 ORTHO05D005470 1.0e-07 62.0 63 47.6
MBI14_g36884_MAGBIO Magnolia biondii HOM05D004325 ORTHO05D005470 7.3e-06 55.8 106 34.0


User provided reference genes

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