Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_25873 Corylus avellana HOM05D006588 ORTHO05D008272 3.1e-170 601.7 295 100.0
Cfa003132 Carpinus fangiana HOM05D006588 ORTHO05D008272 6.5e-152 540.8 287 91.3
QL02p063459 Quercus lobata HOM05D006588 ORTHO05D008272 1.6e-110 403.3 285 70.5
Gohir.D06G069300 Gossypium hirsutum HOM05D006588 ORTHO05D008272 1.6e-97 360.1 284 63.0
Gorai.010G080900 Gossypium raimondii HOM05D006588 ORTHO05D008272 1.6e-97 360.1 284 63.0
Thecc.09G094100 Theobroma cacao HOM05D006588 ORTHO05D008272 2.5e-95 352.8 289 60.9
Atru.chr7.1520 Acer truncatum HOM05D006588 ORTHO05D008272 1.5e-92 343.6 289 59.5
Ciclev10008264m.g Citrus clementina HOM05D006588 ORTHO05D008272 2.9e-91 339.3 288 60.1
Dinv36733 Davidia involucrata HOM05D006588 ORTHO05D008272 8.3e-91 337.8 270 62.6
CSS0027625 Camellia sinensis var. sinensis HOM05D006588 ORTHO05D008272 1.1e-90 337.4 290 57.6
TAR636G2459 Trochodendron aralioides HOM05D006588 ORTHO05D008272 1.4e-90 337.0 291 57.7
Duzib150G1363 Durio zibethinus HOM05D006588 ORTHO05D008272 2.4e-90 336.3 289 59.2
Sc15g0003870 Simmondsia chinensis HOM05D006588 ORTHO05D008272 1.7e-88 330.1 289 54.3
Manes.03G030400 Manihot esculenta HOM05D006588 ORTHO05D008272 8.6e-88 327.8 289 57.4
MSTRG.10583 Avicennia marina HOM05D006588 ORTHO05D008272 5.6e-87 325.1 288 55.9
Hma1.2p1_1074F.1_g254320 Hydrangea macrophylla HOM05D006588 ORTHO05D008272 2.1e-86 323.2 290 56.9
Cc06_g10980 Coffea canephora HOM05D006588 ORTHO05D008272 5.2e-85 318.5 290 55.2
CANSAT56G3648 Cannabis sativa HOM05D006588 ORTHO05D008272 5.8e-84 315.1 286 56.6
CANSAT56G2228 Cannabis sativa HOM05D006588 ORTHO05D008272 1.1e-82 310.8 286 56.3
Rhsim05G0031800 Rhododendron simsii HOM05D006588 ORTHO05D008272 1.4e-82 310.5 290 54.1
Lj4C316T0 Lonicera japonica HOM05D006588 ORTHO05D008272 1.7e-80 303.5 292 54.5
Oeu018228.1 Olea europaea HOM05D006588 ORTHO05D008272 1.2e-78 297.4 288 53.1
Lalb_Chr09g0331761 Lupinus albus HOM05D006588 ORTHO05D008272 2.1e-78 296.6 290 52.1
ClCG11G012860 Citrullus lanatus HOM05D006588 ORTHO05D008272 3.6e-78 295.8 288 52.1
SalBow1G2363 Salvia bowleyana HOM05D006588 ORTHO05D008272 1.4e-77 293.9 287 52.3
SalBow1G2795 Salvia bowleyana HOM05D006588 ORTHO05D008272 1.4e-77 293.9 287 52.3
Migut.K00574 Erythranthe guttata HOM05D006588 ORTHO05D008272 2.4e-77 293.1 291 50.5
Sed0004057 Sechium edule HOM05D006588 ORTHO05D008272 3.1e-77 292.7 291 52.6
CsaV3_5G029260 Cucumis sativus L. HOM05D006588 ORTHO05D008272 9.0e-77 291.2 288 50.7
Glyma.08G030700 Glycine max HOM05D006588 ORTHO05D008272 2.0e-76 290.0 289 51.6
vmacro10821 Vaccinium macrocarpon HOM05D006588 ORTHO05D008272 2.6e-76 289.7 294 51.0
TWI34G1517 Tripterygium wilfordii HOM05D006588 ORTHO05D008272 9.9e-76 287.7 296 52.7
CANSAT56G0790 Cannabis sativa HOM05D006588 ORTHO05D008272 2.2e-75 286.6 254 58.3
Rhsim05G0031600 Rhododendron simsii HOM05D006588 ORTHO05D008272 6.4e-75 285.0 290 51.4
Lj4g0006334 Lotus japonicus HOM05D006588 ORTHO05D008272 8.4e-75 284.6 294 49.7
CiPaw.03G219600 Carya illinoinensis HOM05D006588 ORTHO05D008272 1.1e-74 284.3 168 81.5
Nn6g35407 Nelumbo nucifera HOM05D006588 ORTHO05D008272 1.4e-74 283.9 282 51.8
MELO3C011777.2 Cucumis melo HOM05D006588 ORTHO05D008272 1.9e-74 283.5 291 50.2
Phvul.002G305400 Phaseolus vulgaris HOM05D006588 ORTHO05D008272 7.1e-74 281.6 291 49.5
ECA240G3150 Erigeron canadensis HOM05D006588 ORTHO05D008272 9.3e-74 281.2 291 49.1
VMungo0251G0425 Vigna mungo HOM05D006588 ORTHO05D008272 2.1e-73 280.0 291 49.1
THA.LOC104814599 Tarenaya hassleriana HOM05D006588 ORTHO05D008272 1.3e-72 277.3 278 51.8
CANSAT56G3251 Cannabis sativa HOM05D006588 ORTHO05D008272 8.7e-72 274.6 268 53.4
Eucgr.C00929 Eucalyptus grandis HOM05D006588 ORTHO05D008272 1.5e-71 273.9 285 50.5
Lsat_1_v5_gn_7_39041 Lactuca sativa HOM05D006588 ORTHO05D008272 1.9e-71 273.5 287 47.0
MBI04_g06220_MAGBIO Magnolia biondii HOM05D006588 ORTHO05D008272 4.3e-71 272.3 291 48.5
SGA_v2.0_scaffold28G11949 Striga asiatica HOM05D006588 ORTHO05D008272 2.8e-70 269.6 287 48.4
HanXRQChr09g0238251 Helianthus annuus HOM05D006588 ORTHO05D008272 8.1e-70 268.1 291 44.7
TPR.G25442 Trifolium pratense HOM05D006588 ORTHO05D008272 8.1e-70 268.1 297 47.5
Thhalv10025196m.g Eutrema salsugineum HOM05D006588 ORTHO05D008272 4.0e-69 265.8 290 50.0
AL7G22970 Arabidopsis lyrata HOM05D006588 ORTHO05D008272 9.0e-69 264.6 290 50.0
AT4G29420 Arabidopsis thaliana HOM05D006588 ORTHO05D008272 9.0e-69 264.6 291 50.2
Ca_17389_v3 Cicer arietinum L. HOM05D006588 ORTHO05D008272 1.2e-68 264.2 289 47.4
Psat7g018800 Pisum sativum HOM05D006588 ORTHO05D008272 1.5e-68 263.8 296 45.6
Sp7g27300 Schrenkiella parvula HOM05D006588 ORTHO05D008272 7.6e-68 261.5 287 49.1
Aa31LG2G21010 Aethionema arabicum HOM05D006588 ORTHO05D008272 4.9e-67 258.8 286 49.0
unitig_699.g19309 Utricularia gibba HOM05D006588 ORTHO05D008272 1.4e-66 257.3 289 46.4
BraA01t00812Z Brassica rapa HOM05D006588 ORTHO05D008272 2.4e-66 256.5 288 49.3
A01p08610 Brassica napus HOM05D006588 ORTHO05D008272 3.2e-66 256.1 288 49.7
BcaC09g51727 Brassica carinata HOM05D006588 ORTHO05D008272 1.2e-65 254.2 294 48.3
BolC1t00966H Brassica oleracea HOM05D006588 ORTHO05D008272 1.2e-65 254.2 288 48.6
C01p10080 Brassica napus HOM05D006588 ORTHO05D008272 4.6e-65 252.3 288 48.3
CARHR237240 Cardamine hirsuta HOM05D006588 ORTHO05D008272 1.0e-64 251.1 291 47.8
Carub.0007s1112 Capsella rubella HOM05D006588 ORTHO05D008272 3.0e-64 249.6 290 47.6
Gohir.A06G070700 Gossypium hirsutum HOM05D006588 ORTHO05D008272 1.3e-62 244.2 160 71.9
Medtr8g101930 Medicago truncatula HOM05D006588 ORTHO05D008272 1.6e-62 243.8 285 47.0
Eucgr.L03123 Eucalyptus grandis HOM05D006588 ORTHO05D008272 1.9e-58 230.3 290 45.5
Lsat_1_v5_gn_7_38281 Lactuca sativa HOM05D006588 ORTHO05D008272 4.6e-57 225.7 294 40.5
Lsat_1_v5_gn_7_38780 Lactuca sativa HOM05D006588 ORTHO05D008272 4.6e-57 225.7 290 40.3
CDE06G2665 Ceratophyllum demersum HOM05D006588 ORTHO05D008272 5.1e-56 222.2 283 42.4
COL.COLO4_18239 Corchorus olitorius HOM05D006588 ORTHO05D008272 1.1e-55 221.1 213 55.4
Lsat_1_v5_gn_7_38040 Lactuca sativa HOM05D006588 ORTHO05D008272 4.8e-54 215.7 284 38.0
Lsat_1_v5_gn_7_38020 Lactuca sativa HOM05D006588 ORTHO05D008272 1.1e-53 214.5 284 37.7
Lsat_1_v5_gn_7_37981 Lactuca sativa HOM05D006588 ORTHO05D008272 3.4e-52 209.5 291 36.8
Lsat_1_v5_gn_7_38001 Lactuca sativa HOM05D006588 ORTHO05D008272 3.4e-52 209.5 291 36.8
ATR0789G046 Amborella trichopoda HOM05D006588 ORTHO05D008272 1.7e-51 207.2 279 38.4
Os01g0193500 Oryza sativa ssp. japonica HOM05D006588 ORTHO05D008272 1.2e-49 201.1 282 39.7
HanXRQChr03g0060631 Helianthus annuus HOM05D006588 ORTHO05D008272 3.5e-49 199.5 287 39.7
Zm00001eb121140 Zea mays HOM05D006588 ORTHO05D008272 1.8e-48 197.2 281 39.9
HanXRQChr03g0061101 Helianthus annuus HOM05D006588 ORTHO05D008272 3.0e-48 196.4 290 36.9
HPP92_003983 Vanilla planifolia HOM05D006588 ORTHO05D008272 5.1e-48 195.7 290 36.2
HanXRQChr03g0060681 Helianthus annuus HOM05D006588 ORTHO05D008272 1.3e-46 191.0 285 37.2
HanXRQChr03g0060991 Helianthus annuus HOM05D006588 ORTHO05D008272 1.3e-46 191.0 287 37.3
HanXRQChr03g0060671 Helianthus annuus HOM05D006588 ORTHO05D008272 1.1e-45 188.0 286 37.1
HanXRQChr03g0060961 Helianthus annuus HOM05D006588 ORTHO05D008272 2.4e-45 186.8 290 37.6
SEGI_25649 Sequoiadendron giganteum HOM05D006588 ORTHO05D008272 5.0e-43 179.1 294 36.7
HanXRQChr05g0142321 Helianthus annuus HOM05D006588 ORTHO05D008272 5.1e-40 169.1 239 40.2
Actinidia39746 Actinidia chinensis HOM05D006588 ORTHO05D008272 6.9e-37 158.7 291 37.5
Lsat_1_v5_gn_7_38181 Lactuca sativa HOM05D006588 ORTHO05D008272 1.1e-29 134.8 283 31.8
HanXRQChr03g0060651 Helianthus annuus HOM05D006588 ORTHO05D008272 2.9e-27 126.7 160 42.5
Nn7g36587 Nelumbo nucifera HOM05D006588 ORTHO05D008272 1.8e-24 117.5 72 75.0
HanXRQChr03g0061001 Helianthus annuus HOM05D006588 ORTHO05D008272 5.7e-23 112.5 131 46.6
HanXRQChr03g0060621 Helianthus annuus HOM05D006588 ORTHO05D008272 7.0e-21 105.5 98 53.1
Rhsim05G0031700 Rhododendron simsii HOM05D006588 ORTHO05D008272 3.6e-17 93.2 96 46.9
Actinidia25278 Actinidia chinensis HOM05D006588 ORTHO05D008272 6.5e-11 72.4 41 80.5
Pp3c13_20140 Physcomitrium patens HOM05D006588 ORTHO05D008272 8.5e-11 72.0 250 22.8
Pp3c4_15950 Physcomitrium patens HOM05D006588 ORTHO05D008272 4.2e-10 69.7 257 27.6
AagrBONN_evm.TU.Sc2ySwM_228.3249 Anthoceros agrestis HOM05D006588 ORTHO05D008272 7.2e-10 68.9 146 32.2
Glyma.05G223602 Glycine max HOM05D006588 ORTHO05D008272 4.7e-09 66.2 91 39.6
Pp3c10_4240 Physcomitrium patens HOM05D006588 ORTHO05D008272 6.1e-09 65.9 266 21.8
Pp3c1_20980 Physcomitrium patens HOM05D006588 ORTHO05D008272 2.3e-08 63.9 266 19.9


User provided reference genes

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