Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_25864 Corylus avellana HOM05D006529 ORTHO05D008380 4.2e-101 371.3 180 100.0
Cfa003138 Carpinus fangiana HOM05D006529 ORTHO05D008380 9.9e-95 350.1 194 89.2
CiPaw.04G153200 Carya illinoinensis HOM05D006529 ORTHO05D008380 9.0e-80 300.4 194 76.8
QL02p063543 Quercus lobata HOM05D006529 ORTHO05D008380 4.2e-77 291.6 232 64.7
MD02G1072300 Malus domestica HOM05D006529 ORTHO05D008380 1.0e-75 287.0 197 73.6
FAN23G2505 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.3e-75 286.6 192 73.4
FvH4_1g06740 Fragaria vesca HOM05D006529 ORTHO05D008380 2.3e-75 285.8 192 73.4
FAN19G1593 Fragaria x ananassa HOM05D006529 ORTHO05D008380 2.3e-75 285.8 192 73.4
Atru.chr7.1518 Acer truncatum HOM05D006529 ORTHO05D008380 1.5e-74 283.1 195 70.8
Prupe.7G215100 Prunus persica HOM05D006529 ORTHO05D008380 1.5e-74 283.1 197 73.1
RcHm_v2.0_Chr2g0092481 Rosa chinensis HOM05D006529 ORTHO05D008380 1.9e-74 282.7 192 71.9
Dinv42286 Davidia involucrata HOM05D006529 ORTHO05D008380 1.6e-73 279.6 206 67.0
FAN14G0658 Fragaria x ananassa HOM05D006529 ORTHO05D008380 2.1e-73 279.3 180 75.0
MD15G1202100 Malus domestica HOM05D006529 ORTHO05D008380 4.8e-73 278.1 197 72.1
CSS0016193 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 1.4e-72 276.6 196 66.8
Manes.16G105400 Manihot esculenta HOM05D006529 ORTHO05D008380 5.3e-72 274.6 197 66.5
Cc06_g10920 Coffea canephora HOM05D006529 ORTHO05D008380 2.0e-71 272.7 193 67.9
TAR624G0297 Trochodendron aralioides HOM05D006529 ORTHO05D008380 1.7e-70 269.6 197 67.0
Ciclev10009577m.g Citrus clementina HOM05D006529 ORTHO05D008380 2.9e-70 268.9 189 69.3
Lalb_Chr05g0223501 Lupinus albus HOM05D006529 ORTHO05D008380 3.8e-70 268.5 194 67.5
Lj7C671T1 Lonicera japonica HOM05D006529 ORTHO05D008380 1.1e-69 266.9 208 63.9
Gohir.D05G029600 Gossypium hirsutum HOM05D006529 ORTHO05D008380 1.9e-69 266.2 192 66.7
Gorai.009G029800 Gossypium raimondii HOM05D006529 ORTHO05D008380 1.9e-69 266.2 192 66.7
Ca_17386_v3 Cicer arietinum L. HOM05D006529 ORTHO05D008380 2.5e-69 265.8 193 68.4
Duzib150G0994 Durio zibethinus HOM05D006529 ORTHO05D008380 2.5e-69 265.8 192 66.7
Hund07265 Selenicereus undatus HOM05D006529 ORTHO05D008380 2.5e-69 265.8 196 64.8
Dinv36729 Davidia involucrata HOM05D006529 ORTHO05D008380 4.2e-69 265.0 196 66.3
ECA240G3812 Erigeron canadensis HOM05D006529 ORTHO05D008380 4.2e-69 265.0 202 63.4
GSVIVG01015253001 Vitis vinifera HOM05D006529 ORTHO05D008380 4.2e-69 265.0 195 68.2
Gohir.A05G027800 Gossypium hirsutum HOM05D006529 ORTHO05D008380 9.3e-69 263.8 192 66.7
Potri.006G153800 Populus trichocarpa HOM05D006529 ORTHO05D008380 1.6e-68 263.1 194 66.0
Thecc.09G094900 Theobroma cacao HOM05D006529 ORTHO05D008380 3.6e-68 261.9 199 65.8
AUR62000487 Chenopodium quinoa HOM05D006529 ORTHO05D008380 4.6e-68 261.5 194 65.5
Nitab4.5_0004011g0030 Nicotiana tabacum HOM05D006529 ORTHO05D008380 4.6e-68 261.5 198 63.6
Glyma.08G031000 Glycine max HOM05D006529 ORTHO05D008380 6.1e-68 261.2 193 66.8
PGR142G1231 Punica granatum HOM05D006529 ORTHO05D008380 1.0e-67 260.4 197 61.9
AUR62006831 Chenopodium quinoa HOM05D006529 ORTHO05D008380 3.9e-67 258.5 195 65.1
Nn8g38953 Nelumbo nucifera HOM05D006529 ORTHO05D008380 3.9e-67 258.5 202 62.4
Actinidia29893 Actinidia chinensis HOM05D006529 ORTHO05D008380 5.1e-67 258.1 211 62.6
Eucgr.C00932 Eucalyptus grandis HOM05D006529 ORTHO05D008380 6.7e-67 257.7 203 61.1
Lj4g0018594 Lotus japonicus HOM05D006529 ORTHO05D008380 8.7e-67 257.3 193 66.3
Ah.06g190810 Amaranthus hybridus HOM05D006529 ORTHO05D008380 1.9e-66 256.1 196 65.8
COL.COLO4_18251 Corchorus olitorius HOM05D006529 ORTHO05D008380 1.9e-66 256.1 205 62.4
Medtr8g101990 Medicago truncatula HOM05D006529 ORTHO05D008380 7.4e-66 254.2 193 63.7
HanXRQChr09g0238511 Helianthus annuus HOM05D006529 ORTHO05D008380 2.2e-65 252.7 194 61.9
vmacro06269 Vaccinium macrocarpon HOM05D006529 ORTHO05D008380 2.2e-65 252.7 199 63.3
CANSAT56G2962 Cannabis sativa HOM05D006529 ORTHO05D008380 3.7e-65 251.9 177 70.1
TWI63G1011 Tripterygium wilfordii HOM05D006529 ORTHO05D008380 3.7e-65 251.9 192 63.0
arahy.Tifrunner.gnm1.ann1.YG2MQU Arachis hypogaea HOM05D006529 ORTHO05D008380 4.8e-65 251.5 194 64.4
Psat7g019320 Pisum sativum HOM05D006529 ORTHO05D008380 8.2e-65 250.8 193 63.7
DCAR_012008 Daucus carota HOM05D006529 ORTHO05D008380 1.1e-64 250.4 204 59.3
Glyma.05G223900 Glycine max HOM05D006529 ORTHO05D008380 1.4e-64 250.0 193 64.2
Oeu052123.2 Olea europaea HOM05D006529 ORTHO05D008380 1.8e-64 249.6 217 56.2
VMungo0251G0255 Vigna mungo HOM05D006529 ORTHO05D008380 2.4e-64 249.2 193 63.2
arahy.Tifrunner.gnm1.ann1.HB8I5Y Arachis hypogaea HOM05D006529 ORTHO05D008380 3.1e-64 248.8 194 63.9
CAN.G142.8 Capsicum annuum HOM05D006529 ORTHO05D008380 4.1e-64 248.4 194 60.3
Nn6g35394 Nelumbo nucifera HOM05D006529 ORTHO05D008380 6.9e-64 247.7 199 60.8
CARHR233790 Cardamine hirsuta HOM05D006529 ORTHO05D008380 1.2e-63 246.9 197 58.9
THA.LOC104813489 Tarenaya hassleriana HOM05D006529 ORTHO05D008380 1.2e-63 246.9 196 61.2
AL7G26720 Arabidopsis lyrata HOM05D006529 ORTHO05D008380 3.4e-63 245.4 197 58.9
A03p56550 Brassica napus HOM05D006529 ORTHO05D008380 3.4e-63 245.4 199 57.8
Carub.0007s1471 Capsella rubella HOM05D006529 ORTHO05D008380 7.7e-63 244.2 197 58.9
Thhalv10026289m.g Eutrema salsugineum HOM05D006529 ORTHO05D008380 7.7e-63 244.2 197 58.9
MSTRG.10586 Avicennia marina HOM05D006529 ORTHO05D008380 1.7e-62 243.0 195 61.0
PSO832G0687 Papaver somniferum HOM05D006529 ORTHO05D008380 1.7e-62 243.0 194 60.3
Sp7g24240 Schrenkiella parvula HOM05D006529 ORTHO05D008380 1.7e-62 243.0 197 58.9
AT4G26240 Arabidopsis thaliana HOM05D006529 ORTHO05D008380 2.2e-62 242.7 197 58.4
C07p54750 Brassica napus HOM05D006529 ORTHO05D008380 6.5e-62 241.1 199 58.3
BolC7t45964H Brassica oleracea HOM05D006529 ORTHO05D008380 6.5e-62 241.1 199 58.3
ClCG03G015880 Citrullus lanatus HOM05D006529 ORTHO05D008380 1.9e-61 239.6 197 59.4
CSS0046887 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 7.2e-61 237.7 197 60.9
BcaC06g32765 Brassica carinata HOM05D006529 ORTHO05D008380 1.2e-60 236.9 201 57.7
PSO063G6648 Papaver somniferum HOM05D006529 ORTHO05D008380 2.7e-60 235.7 194 58.8
BraA03t14725Z Brassica rapa HOM05D006529 ORTHO05D008380 6.1e-60 234.6 200 56.0
Aqoxy7G01329 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 2.3e-59 232.6 195 60.5
Sed0011062 Sechium edule HOM05D006529 ORTHO05D008380 5.1e-59 231.5 192 58.3
MELO3C015437.2 Cucumis melo HOM05D006529 ORTHO05D008380 1.1e-58 230.3 183 61.7
Migut.K00572 Erythranthe guttata HOM05D006529 ORTHO05D008380 1.1e-58 230.3 196 58.2
Phvul.002G305700 Phaseolus vulgaris HOM05D006529 ORTHO05D008380 1.5e-58 229.9 193 61.1
CDE05G3131 Ceratophyllum demersum HOM05D006529 ORTHO05D008380 5.7e-58 228.0 195 56.4
Peaxi162Scf00883g01013 Petunia axillaris HOM05D006529 ORTHO05D008380 9.7e-58 227.3 187 59.4
SGA_v2.0_scaffold210G42089 Striga asiatica HOM05D006529 ORTHO05D008380 6.3e-57 224.6 186 60.2
Aqoxy199s004 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 1.4e-56 223.4 190 60.0
FAN26G1500 Fragaria x ananassa HOM05D006529 ORTHO05D008380 4.1e-56 221.9 206 60.2
SalBow1G6632 Salvia bowleyana HOM05D006529 ORTHO05D008380 2.0e-55 219.5 226 50.0
CANSAT56G3512 Cannabis sativa HOM05D006529 ORTHO05D008380 3.6e-52 208.8 150 68.0
Cpa.g.sc78.59 Carica papaya HOM05D006529 ORTHO05D008380 2.2e-49 199.5 183 59.0
CsaV3_UNG050340 Cucumis sativus L. HOM05D006529 ORTHO05D008380 1.4e-48 196.8 113 74.3
TPR.G17281 Trifolium pratense HOM05D006529 ORTHO05D008380 2.9e-46 189.1 139 61.9
Zm00001eb356780 Zea mays HOM05D006529 ORTHO05D008380 5.5e-45 184.9 165 53.9
Os01g0559300 Oryza sativa ssp. japonica HOM05D006529 ORTHO05D008380 1.2e-44 183.7 172 52.9
Lsat_1_v5_gn_7_38121 Lactuca sativa HOM05D006529 ORTHO05D008380 2.1e-44 183.0 148 56.8
FAN26G3434 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.3e-38 163.7 129 62.8
SalBow1G6389 Salvia bowleyana HOM05D006529 ORTHO05D008380 2.9e-38 162.5 124 58.9
Aa31LG3G600 Aethionema arabicum HOM05D006529 ORTHO05D008380 1.6e-36 156.8 163 50.3
Sc18g0001790 Simmondsia chinensis HOM05D006529 ORTHO05D008380 7.5e-34 147.9 148 52.7
HanXRQChr03g0061021 Helianthus annuus HOM05D006529 ORTHO05D008380 2.2e-33 146.4 106 61.3
CsaV3_1G040070 Cucumis sativus L. HOM05D006529 ORTHO05D008380 1.0e-30 137.5 164 47.6
Lalb_Chr09g0331701 Lupinus albus HOM05D006529 ORTHO05D008380 2.0e-26 123.2 67 76.1
HPP92_005506 Vanilla planifolia HOM05D006529 ORTHO05D008380 2.8e-25 119.4 152 44.1
SMO164G0011 Selaginella moellendorffii HOM05D006529 ORTHO05D008380 5.6e-21 105.1 162 36.4
CBR_g10883 Chara braunii HOM05D006529 ORTHO05D008380 1.5e-18 97.1 166 32.5
Sabra06G0121800 Salix brachista HOM05D006529 ORTHO05D008380 5.7e-18 95.1 54 74.1
SHI02792 Sapria himalayana HOM05D006529 ORTHO05D008380 5.7e-18 95.1 113 41.6
Nitab4.5_0009098g0020 Nicotiana tabacum HOM05D006529 ORTHO05D008380 1.1e-16 90.9 77 62.3
Sabra06G0122000 Salix brachista HOM05D006529 ORTHO05D008380 9.2e-16 87.8 97 50.5
FAN27G1398 Fragaria x ananassa HOM05D006529 ORTHO05D008380 4.6e-15 85.5 67 64.2
SHI02791 Sapria himalayana HOM05D006529 ORTHO05D008380 1.3e-14 84.0 51 68.6
PGSC0003DMG400015618 Solanum tuberosum HOM05D006529 ORTHO05D008380 2.3e-11 73.2 71 57.7
HanXRQChr03g0061031 Helianthus annuus HOM05D006529 ORTHO05D008380 5.8e-10 68.6 72 48.6
FAN02G1845 Fragaria x ananassa HOM05D000599 ORTHO05D000554 9.8e-10 67.8 84 50.0
Sopen08g011810 Solanum pennellii HOM05D006529 ORTHO05D008380 9.8e-10 67.8 72 45.8
Solyc08g041690.1 Solanum lycopersicum HOM05D006529 ORTHO05D008380 3.2e-08 62.8 34 73.5
C01p22040 Brassica napus HOM05D006529 ORTHO05D008380 2.7e-07 59.7 62 45.2
BolC1t02133H Brassica oleracea HOM05D006529 ORTHO05D008380 2.7e-07 59.7 62 45.2
Glyma.05G224100 Glycine max HOM05D006529 ORTHO05D008380 6.6e-06 55.1 28 75.0


User provided reference genes

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