Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_25785 Corylus avellana HOM05D003644 ORTHO05D004305 1.5e-96 356.3 199 100.0
Thecc.09G105500 Theobroma cacao HOM05D003644 ORTHO05D004305 1.0e-71 273.9 200 77.0
CiPaw.03G227900 Carya illinoinensis HOM05D003644 ORTHO05D004305 2.9e-71 272.3 202 79.7
Duzib187G1156 Durio zibethinus HOM05D003644 ORTHO05D004305 3.3e-67 258.8 203 72.9
GSVIVG01015346001 Vitis vinifera HOM05D003644 ORTHO05D004305 2.8e-66 255.8 199 69.3
QL02p044635 Quercus lobata HOM05D003644 ORTHO05D004305 2.0e-64 249.6 204 76.5
Duzib150G1566 Durio zibethinus HOM05D003644 ORTHO05D004305 1.0e-63 247.3 200 68.0
Manes.03G024200 Manihot esculenta HOM05D003644 ORTHO05D004305 1.1e-62 243.8 201 65.7
Duzib168G0231 Durio zibethinus HOM05D003644 ORTHO05D004305 6.1e-61 238.0 202 71.3
Manes.16G112500 Manihot esculenta HOM05D003644 ORTHO05D004305 8.8e-60 234.2 200 66.5
Cpa.g.sc23.57 Carica papaya HOM05D003644 ORTHO05D004305 7.4e-59 231.1 201 65.7
CANSAT56G0200 Cannabis sativa HOM05D003644 ORTHO05D004305 8.5e-55 217.6 224 66.1
Gorai.010G073900 Gossypium raimondii HOM05D003644 ORTHO05D004305 7.2e-54 214.5 200 65.5
Prupe.7G225200 Prunus persica HOM05D003644 ORTHO05D004305 7.2e-54 214.5 213 65.7
Ciclev10010512m.g Citrus clementina HOM05D003644 ORTHO05D004305 1.2e-53 213.8 207 61.8
Potri.018G084100 Populus trichocarpa HOM05D003644 ORTHO05D004305 2.7e-53 212.6 202 66.3
VMungo0251G1747 Vigna mungo HOM05D003644 ORTHO05D004305 2.3e-52 209.5 201 63.7
Dinv41640 Davidia involucrata HOM05D003644 ORTHO05D004305 5.2e-52 208.4 162 76.5
Phvul.002G311400 Phaseolus vulgaris HOM05D003644 ORTHO05D004305 1.5e-51 206.8 200 63.0
Potri.006G161100 Populus trichocarpa HOM05D003644 ORTHO05D004305 1.5e-51 206.8 202 61.4
Gohir.D06G063400 Gossypium hirsutum HOM05D003644 ORTHO05D004305 3.3e-51 205.7 197 64.0
Sabra18G0072500 Salix brachista HOM05D003644 ORTHO05D004305 9.7e-51 204.1 225 61.3
CSS0010496 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 2.4e-49 199.5 205 62.0
CSS0033414 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 2.4e-49 199.5 205 62.0
Glyma.05G229100 Glycine max HOM05D003644 ORTHO05D004305 2.4e-49 199.5 201 60.2
TAR636G2793 Trochodendron aralioides HOM05D003644 ORTHO05D004305 9.1e-49 197.6 200 59.0
MBI04_g14930_MAGBIO Magnolia biondii HOM05D003644 ORTHO05D004305 2.6e-48 196.1 201 58.7
TAR624G1421 Trochodendron aralioides HOM05D003644 ORTHO05D004305 2.6e-48 196.1 201 60.7
Gohir.D05G026700 Gossypium hirsutum HOM05D003644 ORTHO05D004305 2.2e-47 193.0 211 57.3
Gorai.001G007300 Gossypium raimondii HOM05D003644 ORTHO05D004305 2.9e-47 192.6 204 65.7
Glyma.09G193400 Glycine max HOM05D003644 ORTHO05D004305 1.5e-46 190.3 204 60.3
Oeu015581.1 Olea europaea HOM05D003644 ORTHO05D004305 1.5e-46 190.3 197 58.9
MD02G1057600 Malus domestica HOM05D003644 ORTHO05D004305 2.5e-46 189.5 208 58.7
CSS0008241 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 4.2e-46 188.7 203 56.7
Medtr6g088280 Medicago truncatula HOM05D003644 ORTHO05D004305 5.5e-46 188.3 200 55.0
Lj2g0017641 Lotus japonicus HOM05D003644 ORTHO05D004305 7.2e-46 188.0 201 57.2
Gohir.A06G064800 Gossypium hirsutum HOM05D003644 ORTHO05D004305 1.6e-45 186.8 200 59.5
Gorai.009G026800 Gossypium raimondii HOM05D003644 ORTHO05D004305 2.1e-45 186.4 219 54.8
VMungo0464G0020 Vigna mungo HOM05D003644 ORTHO05D004305 2.1e-45 186.4 205 59.5
Glyma.01G145600 Glycine max HOM05D003644 ORTHO05D004305 6.1e-45 184.9 205 62.4
Gohir.A05G025200 Gossypium hirsutum HOM05D003644 ORTHO05D004305 2.3e-44 183.0 211 55.0
Phvul.004G168350 Phaseolus vulgaris HOM05D003644 ORTHO05D004305 5.2e-44 181.8 204 56.4
Atru.chr7.1390 Acer truncatum HOM05D003644 ORTHO05D004305 6.7e-44 181.4 211 55.5
Peaxi162Scf00231g00061 Petunia axillaris HOM05D003644 ORTHO05D004305 8.8e-44 181.0 205 54.6
Glyma.08G036100 Glycine max HOM05D003644 ORTHO05D004305 1.2e-43 180.6 204 58.8
Psat1g044920 Pisum sativum HOM05D003644 ORTHO05D004305 1.2e-43 180.6 202 58.4
TPR.G34913 Trifolium pratense HOM05D003644 ORTHO05D004305 1.2e-43 180.6 205 54.1
Nn2g11654 Nelumbo nucifera HOM05D003644 ORTHO05D004305 2.0e-43 179.9 205 55.6
Nn3g18137 Nelumbo nucifera HOM05D003644 ORTHO05D004305 4.4e-43 178.7 203 62.1
Gohir.D07G007600 Gossypium hirsutum HOM05D003644 ORTHO05D004305 7.5e-43 177.9 204 64.2
MD15G1192000 Malus domestica HOM05D003644 ORTHO05D004305 2.8e-42 176.0 206 59.2
COL.COLO4_34805 Corchorus olitorius HOM05D003644 ORTHO05D004305 3.7e-42 175.6 211 55.9
THA.LOC104814562 Tarenaya hassleriana HOM05D003644 ORTHO05D004305 3.7e-42 175.6 208 53.8
Gohir.A07G004600 Gossypium hirsutum HOM05D003644 ORTHO05D004305 1.1e-41 174.1 194 64.4
arahy.Tifrunner.gnm1.ann1.TDG8V6 Arachis hypogaea HOM05D003644 ORTHO05D004305 1.4e-41 173.7 213 58.7
Peaxi162Scf00665g00003 Petunia axillaris HOM05D003644 ORTHO05D004305 2.7e-40 169.5 201 52.2
TWI34G1832 Tripterygium wilfordii HOM05D003644 ORTHO05D004305 1.5e-38 163.7 211 51.7
Lalb_Chr22g0352641 Lupinus albus HOM05D003644 ORTHO05D004305 3.2e-38 162.5 212 57.1
SalBow6G0047 Salvia bowleyana HOM05D003644 ORTHO05D004305 2.7e-37 159.5 209 48.8
FAN19G0617 Fragaria x ananassa HOM05D003644 ORTHO05D004305 6.1e-37 158.3 215 54.9
FAN26G3023 Fragaria x ananassa HOM05D003644 ORTHO05D004305 6.1e-37 158.3 216 54.2
FAN28G1311 Fragaria x ananassa HOM05D003644 ORTHO05D004305 1.4e-36 157.1 226 53.1
FvH4_1g05660 Fragaria vesca HOM05D003644 ORTHO05D004305 2.3e-36 156.4 215 54.9
FAN26G0903 Fragaria x ananassa HOM05D003644 ORTHO05D004305 4.0e-36 155.6 217 53.0
ClCG11G002330 Citrullus lanatus HOM05D003644 ORTHO05D004305 5.2e-36 155.2 211 49.8
DCAR_012057 Daucus carota HOM05D003644 ORTHO05D004305 6.8e-36 154.8 205 51.7
CsaV3_2G002110 Cucumis sativus L. HOM05D003644 ORTHO05D004305 1.2e-35 154.1 208 50.0
THA.LOC104804017 Tarenaya hassleriana HOM05D003644 ORTHO05D004305 1.2e-35 154.1 204 50.0
Sed0019018 Sechium edule HOM05D003644 ORTHO05D004305 7.5e-35 151.4 209 50.2
PGR142G1369 Punica granatum HOM05D003644 ORTHO05D004305 9.8e-35 151.0 214 49.1
PGSC0003DMG400003139 Solanum tuberosum HOM05D003644 ORTHO05D004305 9.8e-35 151.0 200 50.0
MELO3C004570.2 Cucumis melo HOM05D003644 ORTHO05D004305 1.7e-34 150.2 214 49.1
Cc06_g10070 Coffea canephora HOM05D003644 ORTHO05D004305 2.2e-34 149.8 206 55.8
MSTRG.6013 Avicennia marina HOM05D003644 ORTHO05D004305 2.8e-34 149.4 202 48.5
MSTRG.19571 Avicennia marina HOM05D003644 ORTHO05D004305 3.7e-34 149.1 205 47.8
FAN23G2152 Fragaria x ananassa HOM05D003644 ORTHO05D004305 3.7e-34 149.1 225 52.0
Oeu002262.2 Olea europaea HOM05D003644 ORTHO05D004305 3.7e-34 149.1 132 60.6
TWI32G0193 Tripterygium wilfordii HOM05D003644 ORTHO05D004305 1.8e-33 146.7 205 51.2
ClCG06G008860 Citrullus lanatus HOM05D003644 ORTHO05D004305 2.0e-32 143.3 219 47.5
Hma1.2p1_0945F.1_g240090 Hydrangea macrophylla HOM05D003644 ORTHO05D004305 2.7e-32 142.9 202 51.5
arahy.Tifrunner.gnm1.ann1.X7P2RE Arachis hypogaea HOM05D003644 ORTHO05D004305 4.5e-32 142.1 147 62.6
Sopen07g007520 Solanum pennellii HOM05D003644 ORTHO05D004305 4.5e-32 142.1 200 46.0
C01p10620 Brassica napus HOM05D003644 ORTHO05D004305 2.2e-31 139.8 212 44.3
BraA01t00855Z Brassica rapa HOM05D003644 ORTHO05D004305 2.2e-31 139.8 212 44.3
Carub.0007s1180 Capsella rubella HOM05D003644 ORTHO05D004305 2.9e-31 139.4 211 46.4
RcHm_v2.0_Chr2g0091291 Rosa chinensis HOM05D003644 ORTHO05D004305 2.9e-31 139.4 168 56.0
A01p09070 Brassica napus HOM05D003644 ORTHO05D004305 3.8e-31 139.0 212 44.3
COL.COLO4_17464 Corchorus olitorius HOM05D003644 ORTHO05D004305 8.5e-31 137.9 162 49.4
PGSC0003DMG400000374 Solanum tuberosum HOM05D003644 ORTHO05D004305 8.5e-31 137.9 204 47.1
BolC1t01024H Brassica oleracea HOM05D003644 ORTHO05D004305 1.5e-30 137.1 212 43.9
Sopen12g003210 Solanum pennellii HOM05D003644 ORTHO05D004305 1.9e-30 136.7 204 47.5
Thhalv10002311m.g Eutrema salsugineum HOM05D003644 ORTHO05D004305 4.2e-30 135.6 210 45.7
BcaC06g32601 Brassica carinata HOM05D003644 ORTHO05D004305 5.5e-30 135.2 215 44.7
BolC7t46126H Brassica oleracea HOM05D003644 ORTHO05D004305 7.2e-30 134.8 215 45.1
A03p58450 Brassica napus HOM05D003644 ORTHO05D004305 1.2e-29 134.0 215 45.1
C07p56470 Brassica napus HOM05D003644 ORTHO05D004305 1.6e-29 133.7 215 45.1
AT4G28840 Arabidopsis thaliana HOM05D003644 ORTHO05D004305 2.8e-29 132.9 213 45.1
CAN.G1774.6 Capsicum annuum HOM05D003644 ORTHO05D004305 2.8e-29 132.9 172 50.0
Sed0028016 Sechium edule HOM05D003644 ORTHO05D004305 6.1e-29 131.7 206 44.7
Lalb_Chr05g0223051 Lupinus albus HOM05D003644 ORTHO05D004305 1.0e-28 131.0 179 50.3
AUR62010940 Chenopodium quinoa HOM05D003644 ORTHO05D004305 1.4e-28 130.6 209 45.5
CsaV3_1G021830 Cucumis sativus L. HOM05D003644 ORTHO05D004305 1.8e-28 130.2 210 46.7
AL3G48010 Arabidopsis lyrata HOM05D003644 ORTHO05D004305 3.0e-28 129.4 208 44.7
Sed0013314 Sechium edule HOM05D003644 ORTHO05D004305 3.0e-28 129.4 202 45.5
Lsat_1_v5_gn_8_96040 Lactuca sativa HOM05D003644 ORTHO05D004305 4.0e-28 129.0 156 47.4
BcaC09g51666 Brassica carinata HOM05D003644 ORTHO05D004305 2.0e-27 126.7 201 44.3
BcaNung01359 Brassica carinata HOM05D003644 ORTHO05D004305 5.7e-27 125.2 204 43.6
BcaC07g41224 Brassica carinata HOM05D003644 ORTHO05D004305 7.5e-27 124.8 209 44.5
MELO3C024703.2 Cucumis melo HOM05D003644 ORTHO05D004305 7.5e-27 124.8 211 45.5
Sp7g26840 Schrenkiella parvula HOM05D003644 ORTHO05D004305 7.5e-27 124.8 209 43.1
PSO566G0277 Papaver somniferum HOM05D003644 ORTHO05D004305 1.3e-26 124.0 209 45.0
arahy.Tifrunner.gnm1.ann1.XM0XDL Arachis hypogaea HOM05D003644 ORTHO05D004305 1.7e-26 123.6 215 44.7
C08p42300 Brassica napus HOM05D003644 ORTHO05D004305 2.2e-26 123.2 209 44.0
BolC8t51790H Brassica oleracea HOM05D003644 ORTHO05D004305 2.2e-26 123.2 209 44.0
CARHR110580 Cardamine hirsuta HOM05D003644 ORTHO05D004305 2.8e-26 122.9 212 43.4
ECA234G2378 Erigeron canadensis HOM05D003644 ORTHO05D004305 3.7e-26 122.5 203 47.3
A09p59020 Brassica napus HOM05D003644 ORTHO05D004305 8.3e-26 121.3 209 45.0
BraA09t41288Z Brassica rapa HOM05D003644 ORTHO05D004305 8.3e-26 121.3 209 45.0
PSO782G2161 Papaver somniferum HOM05D003644 ORTHO05D004305 1.8e-25 120.2 209 44.5
Lalb_Chr16g0388081 Lupinus albus HOM05D003644 ORTHO05D004305 2.4e-25 119.8 90 67.8
Sp3g33380 Schrenkiella parvula HOM05D003644 ORTHO05D004305 2.4e-25 119.8 214 42.1
Actinidia32668 Actinidia chinensis HOM05D003644 ORTHO05D004305 1.2e-24 117.5 154 50.0
Thhalv10026355m.g Eutrema salsugineum HOM05D003644 ORTHO05D004305 1.6e-24 117.1 204 43.1
Actinidia20403 Actinidia chinensis HOM05D003644 ORTHO05D004305 3.5e-24 115.9 196 46.4
Aa31LG2G21540 Aethionema arabicum HOM05D003644 ORTHO05D004305 5.9e-24 115.2 177 42.4
TPR.G23503 Trifolium pratense HOM05D003644 ORTHO05D004305 2.3e-23 113.2 171 48.5
HanXRQChr12g0358181 Helianthus annuus HOM05D003644 ORTHO05D004305 6.6e-23 111.7 197 42.1
Hund09225 Selenicereus undatus HOM05D003644 ORTHO05D004305 6.6e-23 111.7 212 43.9
Carub.0003s3436 Capsella rubella HOM05D003644 ORTHO05D004305 8.6e-23 111.3 185 41.6
Hund09226 Selenicereus undatus HOM05D003644 ORTHO05D004305 8.6e-23 111.3 193 43.5
Nitab4.5_0014820g0010 Nicotiana tabacum HOM05D003644 ORTHO05D004305 5.6e-22 108.6 152 51.3
PGR102G0050 Punica granatum HOM05D003644 ORTHO05D004305 1.6e-21 107.1 214 42.5
HanXRQChr14g0449921 Helianthus annuus HOM05D003644 ORTHO05D004305 3.6e-21 105.9 196 42.3
EL10Ac8g18428 Beta vulgaris HOM05D003644 ORTHO05D004305 1.0e-20 104.4 211 39.3
AT2G20080 Arabidopsis thaliana HOM05D003644 ORTHO05D004305 3.0e-20 102.8 208 39.9
arahy.Tifrunner.gnm1.ann1.R9ZCFD Arachis hypogaea HOM05D003644 ORTHO05D004305 3.0e-20 102.8 178 41.6
Actinidia09436 Actinidia chinensis HOM05D003644 ORTHO05D004305 5.2e-20 102.1 207 40.6
DCAR_010477 Daucus carota HOM05D003644 ORTHO05D004305 6.8e-20 101.7 206 39.8
Migut.K00491 Erythranthe guttata HOM05D003644 ORTHO05D004305 6.8e-20 101.7 204 37.7
Aa31LG8G17030 Aethionema arabicum HOM05D003644 ORTHO05D004305 1.5e-19 100.5 162 42.6
BcaB08g34898 Brassica carinata HOM05D003644 ORTHO05D004305 1.5e-19 100.5 188 39.4
BcaC07g41225 Brassica carinata HOM05D003644 ORTHO05D004305 1.5e-19 100.5 188 39.4
Sc18g0001380 Simmondsia chinensis HOM05D003644 ORTHO05D004305 1.5e-19 100.5 208 39.9
C09p15050 Brassica napus HOM05D003644 ORTHO05D004305 2.6e-19 99.8 164 38.4
BcaNung04091 Brassica carinata HOM05D003644 ORTHO05D004305 3.4e-19 99.4 191 40.3
Nitab4.5_0002431g0010 Nicotiana tabacum HOM05D003644 ORTHO05D004305 9.8e-19 97.8 92 65.2
A09p12690 Brassica napus HOM05D003644 ORTHO05D004305 3.7e-18 95.9 189 40.7
Solyc12g007240.3 Solanum lycopersicum HOM05D003644 ORTHO05D004305 6.4e-18 95.1 139 46.0
BolC7t40541H Brassica oleracea HOM05D003644 ORTHO05D004305 1.8e-17 93.6 213 41.3
Aqoxy7G01525 Aquilegia oxysepala HOM05D003644 ORTHO05D004305 3.2e-17 92.8 202 40.1
Hund26238 Selenicereus undatus HOM05D003644 ORTHO05D004305 5.4e-17 92.0 202 42.6
Eucgr.C01280 Eucalyptus grandis HOM05D003644 ORTHO05D004305 1.6e-16 90.5 202 37.1
BcaC04g22808 Brassica carinata HOM05D003644 ORTHO05D004305 5.9e-16 88.6 188 41.5
BolC9t54408H Brassica oleracea HOM05D003644 ORTHO05D004305 5.9e-16 88.6 188 41.5
A07p00580 Brassica napus HOM05D003644 ORTHO05D004305 3.9e-15 85.9 210 38.1
Solyc07g018370.3 Solanum lycopersicum HOM05D003644 ORTHO05D004305 3.3e-14 82.8 121 43.8
C07p01040 Brassica napus HOM05D003644 ORTHO05D004305 2.8e-13 79.7 212 39.2
Ah.09g230900 Amaranthus hybridus HOM05D003644 ORTHO05D004305 8.0e-13 78.2 219 37.0
BraA07t27854Z Brassica rapa HOM05D003644 ORTHO05D004305 8.0e-13 78.2 96 51.0
BraA09t36915Z Brassica rapa HOM05D003644 ORTHO05D004305 8.0e-13 78.2 187 35.3
Lsat_1_v5_gn_5_147641 Lactuca sativa HOM05D003644 ORTHO05D004305 8.0e-13 78.2 129 41.1
BcaC06g36690 Brassica carinata HOM05D003644 ORTHO05D004305 1.1e-12 77.8 96 52.1
Oeu018442.1 Olea europaea HOM05D003644 ORTHO05D004305 1.1e-12 77.8 89 55.1
Zm00001eb360290 Zea mays HOM05D003644 ORTHO05D004305 1.1e-12 77.8 209 37.3
Psat7g014640 Pisum sativum HOM05D003644 ORTHO05D004305 5.2e-12 75.5 172 43.0
Sc08g0007700 Simmondsia chinensis HOM05D003644 ORTHO05D004305 6.8e-12 75.1 165 37.0
Nitab4.5_0001004g0030 Nicotiana tabacum HOM05D003644 ORTHO05D004305 1.2e-11 74.3 128 46.9
AL7G23640 Arabidopsis lyrata HOM05D003644 ORTHO05D004305 2.6e-11 73.2 95 50.5
Sc08g0007690 Simmondsia chinensis HOM05D003644 ORTHO05D004305 2.6e-11 73.2 214 36.4
Zm00001eb156860 Zea mays HOM05D003644 ORTHO05D004305 4.4e-11 72.4 212 36.3
HPP92_019983 Vanilla planifolia HOM05D003644 ORTHO05D004305 3.7e-10 69.3 204 35.3
BcaB03g16807 Brassica carinata HOM05D003644 ORTHO05D004305 4.9e-10 68.9 210 34.8
Rhsim05G0043500 Rhododendron simsii HOM05D003644 ORTHO05D004305 8.3e-10 68.2 213 34.7
CARHR236630 Cardamine hirsuta HOM05D003644 ORTHO05D004305 3.5e-08 62.8 62 56.5
BcaB03g16801 Brassica carinata HOM05D003644 ORTHO05D004305 4.6e-08 62.4 60 53.3
unitig_578.g15927 Utricularia gibba HOM05D003644 ORTHO05D004305 3.0e-07 59.7 132 36.4
Medtr8g102890 Medicago truncatula HOM05D003644 ORTHO05D004305 1.1e-06 57.8 90 50.0
Os05g0559316 Oryza sativa ssp. japonica HOM05D003644 ORTHO05D004305 1.5e-06 57.4 77 48.1


User provided reference genes

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