Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_25739 Corylus avellana HOM05D015779 ORTHO05D000074 6.0e-224 780.4 361 100.0
Haze_25741 Corylus avellana HOM05D015779 ORTHO05D000074 9.2e-217 756.5 359 98.1
Haze_25743 Corylus avellana HOM05D015779 ORTHO05D000074 1.9e-174 615.9 456 68.9
Cfa016448 Carpinus fangiana HOM05D015779 ORTHO05D000074 6.3e-141 504.6 454 61.0
Cfa003248 Carpinus fangiana HOM05D015779 ORTHO05D000074 4.5e-131 471.9 452 59.3
Cfa003245 Carpinus fangiana HOM05D015779 ORTHO05D000074 5.5e-129 464.9 452 58.8
Haze_25744 Corylus avellana HOM05D015779 ORTHO05D000074 6.6e-106 388.3 250 74.0
Cfa016450 Carpinus fangiana HOM05D015779 ORTHO05D000074 5.6e-97 358.6 399 53.9
Haze_23002 Corylus avellana HOM05D000151 ORTHO05D000074 2.2e-48 197.2 255 43.1
Cfa009638 Carpinus fangiana HOM05D000151 ORTHO05D000074 2.6e-46 190.3 290 42.4
Cfa003244 Carpinus fangiana HOM05D015779 ORTHO05D000074 5.7e-33 146.0 178 48.3
Haze_18850 Corylus avellana HOM05D000151 ORTHO05D000074 1.8e-18 97.8 178 36.0
Haze_18851 Corylus avellana HOM05D042226 ORTHO05D000074 5.7e-17 92.8 181 35.4
Dinv03061 Davidia involucrata HOM05D000151 ORTHO05D000074 7.0e-15 85.9 198 32.3
Haze_14722 Corylus avellana HOM05D000151 ORTHO05D000074 2.0e-14 84.3 177 33.3
Dinv34063 Davidia involucrata HOM05D000151 ORTHO05D000074 2.0e-14 84.3 287 30.0
Cfa009634 Carpinus fangiana HOM05D000151 ORTHO05D000074 1.0e-13 82.0 173 34.1
TWI53G1253 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 5.0e-13 79.7 169 33.7
Aqoxy7G00553 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 6.5e-13 79.3 165 32.7
Dinv22139 Davidia involucrata HOM05D007685 ORTHO05D009136 1.5e-12 78.2 191 30.9
Dinv22142 Davidia involucrata HOM05D007685 ORTHO05D009136 1.5e-12 78.2 188 30.9
Haze_16880 Corylus avellana HOM05D000151 ORTHO05D000074 3.2e-12 77.0 185 31.4
Dinv15155 Davidia involucrata HOM05D016402 ORTHO05D016246 3.2e-12 77.0 273 27.1
Dinv22141 Davidia involucrata HOM05D007685 ORTHO05D009136 9.5e-12 75.5 236 26.7
Oeu017909.1 Olea europaea HOM05D000151 ORTHO05D000074 9.5e-12 75.5 248 25.8
TWI63G1408 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 9.5e-12 75.5 200 28.5
COL.COLO4_12589 Corchorus olitorius HOM05D000151 ORTHO05D000074 2.1e-11 74.3 173 28.9
MBI19_g33448_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 2.1e-11 74.3 163 31.9
CiPaw.16G031700 Carya illinoinensis HOM05D000151 ORTHO05D000074 2.8e-11 73.9 169 32.0
Dinv03027 Davidia involucrata HOM05D000151 ORTHO05D000074 2.8e-11 73.9 312 25.3
MBI11_g05443_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 6.1e-11 72.8 168 32.7
Aqoxy7G00582 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 8.0e-11 72.4 164 35.4
FAN25G1763 Fragaria x ananassa HOM05D008995 ORTHO05D000074 8.0e-11 72.4 162 30.2
Hma1.2p1_0112F.1_g054880 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 8.0e-11 72.4 189 32.8
Dinv14673 Davidia involucrata HOM05D000151 ORTHO05D000074 1.4e-10 71.6 236 30.5
Aqoxy6G00559 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.8e-10 71.2 234 29.1
Aqoxy2G00555 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.3e-10 70.9 163 28.8
Haze_16879 Corylus avellana HOM05D000151 ORTHO05D000074 2.3e-10 70.9 179 29.1
Dinv04305 Davidia involucrata HOM05D000151 ORTHO05D000074 2.3e-10 70.9 198 28.8
Haze_18853 Corylus avellana HOM05D042226 ORTHO05D000074 3.0e-10 70.5 129 37.2
CAN.G1432.1 Capsicum annuum HOM05D013589 ORTHO05D009136 5.2e-10 69.7 183 26.2
FvH4_3g27200 Fragaria vesca HOM05D008995 ORTHO05D000074 5.2e-10 69.7 162 29.6
Atru.chr12.669 Acer truncatum HOM05D000151 ORTHO05D000074 8.8e-10 68.9 155 30.3
Atru.chr12.695 Acer truncatum HOM05D000151 ORTHO05D000074 8.8e-10 68.9 155 30.3
CAN.G861.25 Capsicum annuum HOM05D013589 ORTHO05D009136 8.8e-10 68.9 173 30.1
FvH4_4g26320 Fragaria vesca HOM05D000151 ORTHO05D000074 8.8e-10 68.9 185 26.5
FAN11G1982 Fragaria x ananassa HOM05D008995 ORTHO05D000074 8.8e-10 68.9 162 29.6
FAN22G1059 Fragaria x ananassa HOM05D000151 ORTHO05D000074 8.8e-10 68.9 190 27.4
Cc08_g06170 Coffea canephora HOM05D000151 ORTHO05D000074 2.0e-09 67.8 250 22.8
Aqoxy7G00556 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.6e-09 67.4 164 28.7
COL.COLO4_24406 Corchorus olitorius HOM05D000151 ORTHO05D000074 2.6e-09 67.4 207 27.1
MD13G1035900 Malus domestica HOM05D008995 ORTHO05D000074 2.6e-09 67.4 184 27.7
Rhsim09G0042100 Rhododendron simsii HOM05D000151 ORTHO05D000074 2.6e-09 67.4 189 30.2
Duzib151G0485 Durio zibethinus HOM05D000151 ORTHO05D000074 3.4e-09 67.0 262 25.6
COL.COLO4_23779 Corchorus olitorius HOM05D000151 ORTHO05D000074 4.4e-09 66.6 163 28.8
Migut.G00592 Erythranthe guttata HOM05D000151 ORTHO05D000074 4.4e-09 66.6 194 30.4
Nitab4.5_0000025g0120 Nicotiana tabacum HOM05D000151 ORTHO05D000074 4.4e-09 66.6 160 29.4
CiPaw.01G271700 Carya illinoinensis HOM05D000151 ORTHO05D000074 5.7e-09 66.2 164 28.7
QL02p017356 Quercus lobata HOM05D000151 ORTHO05D000074 5.7e-09 66.2 174 28.2
TAR374G1214 Trochodendron aralioides HOM05D007354 ORTHO05D006294 5.7e-09 66.2 153 29.4
QL04p009594 Quercus lobata HOM05D000151 ORTHO05D000074 7.5e-09 65.9 143 32.2
Thecc.10G188800 Theobroma cacao HOM05D000151 ORTHO05D000074 7.5e-09 65.9 173 29.5
TAR374G0265 Trochodendron aralioides HOM05D007354 ORTHO05D006294 9.8e-09 65.5 153 29.4
FAN16G1355 Fragaria x ananassa HOM05D008995 ORTHO05D000074 1.3e-08 65.1 162 28.4
Oeu049041.1 Olea europaea HOM05D000151 ORTHO05D000074 1.3e-08 65.1 157 32.5
Nn6g31858 Nelumbo nucifera HOM05D000151 ORTHO05D000074 1.7e-08 64.7 241 24.9
RcHm_v2.0_Chr4g0395201 Rosa chinensis HOM05D000151 ORTHO05D000074 1.7e-08 64.7 163 30.1
MD15G1005500 Malus domestica HOM05D000151 ORTHO05D000074 2.2e-08 64.3 183 29.5
QL03p049732 Quercus lobata HOM05D000151 ORTHO05D000074 2.8e-08 63.9 163 31.9
QL04p009567 Quercus lobata HOM05D000151 ORTHO05D000074 2.8e-08 63.9 132 32.6
TPR.G38135 Trifolium pratense HOM05D000151 ORTHO05D000074 2.8e-08 63.9 292 26.4
CAN.G137.43 Capsicum annuum HOM05D000151 ORTHO05D000074 3.7e-08 63.5 162 28.4
Dinv22134 Davidia involucrata HOM05D007685 ORTHO05D009136 3.7e-08 63.5 278 27.0
Dinv39566 Davidia involucrata HOM05D000151 ORTHO05D000074 3.7e-08 63.5 168 31.0
Nn1g04501 Nelumbo nucifera HOM05D000151 ORTHO05D000074 3.7e-08 63.5 151 33.8
Thecc.03G003800 Theobroma cacao HOM05D000151 ORTHO05D000074 3.7e-08 63.5 170 25.9
VMungo1080G0331 Vigna mungo HOM05D008995 ORTHO05D000074 3.7e-08 63.5 178 28.1
Lj2P493T31 Lonicera japonica HOM05D000151 ORTHO05D000074 4.9e-08 63.2 164 30.5
RcHm_v2.0_Chr4g0434481 Rosa chinensis HOM05D008995 ORTHO05D000074 4.9e-08 63.2 190 28.4
Sopen06g025910 Solanum pennellii HOM05D000151 ORTHO05D000074 4.9e-08 63.2 162 30.2
TAR628G1200 Trochodendron aralioides HOM05D000151 ORTHO05D000074 6.3e-08 62.8 165 33.3
Eucgr.H00629 Eucalyptus grandis HOM05D000151 ORTHO05D000074 8.3e-08 62.4 172 31.4
FvH4_4g04480 Fragaria vesca HOM05D000151 ORTHO05D000074 8.3e-08 62.4 164 29.3
Lj2P549T12 Lonicera japonica HOM05D000151 ORTHO05D000074 8.3e-08 62.4 192 26.0
Potri.002G014500 Populus trichocarpa HOM05D000151 ORTHO05D000074 8.3e-08 62.4 163 31.9
Thecc.03G003700 Theobroma cacao HOM05D000151 ORTHO05D000074 8.3e-08 62.4 170 25.9
TAR376G0686 Trochodendron aralioides HOM05D000151 ORTHO05D000074 8.3e-08 62.4 162 29.6
Aqoxy7G03493 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.1e-07 62.0 242 26.4
CSS0028834 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 1.1e-07 62.0 272 24.6
Cfa014059 Carpinus fangiana HOM05D000151 ORTHO05D000074 1.4e-07 61.6 160 30.6
Ca_20712_v3 Cicer arietinum L. HOM05D000151 ORTHO05D000074 1.4e-07 61.6 181 26.0
COL.COLO4_16997 Corchorus olitorius HOM05D000151 ORTHO05D000074 1.4e-07 61.6 170 30.0
Dinv03024 Davidia involucrata HOM05D023978 ORTHO05D000074 1.4e-07 61.6 164 32.3
FAN12G2073 Fragaria x ananassa HOM05D004442 ORTHO05D002066 1.4e-07 61.6 164 29.3
Migut.C00911 Erythranthe guttata HOM05D000151 ORTHO05D000074 1.8e-07 61.2 164 29.3
Manes.01G063700 Manihot esculenta HOM05D000151 ORTHO05D000074 1.8e-07 61.2 233 27.9
Aqoxy7G03473 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.4e-07 60.8 199 29.1
Dinv12023 Davidia involucrata HOM05D000151 ORTHO05D000074 2.4e-07 60.8 142 31.7
Dinv12036 Davidia involucrata HOM05D000151 ORTHO05D000074 2.4e-07 60.8 142 31.7
Atru.chr9.2200 Acer truncatum HOM05D000151 ORTHO05D000074 3.1e-07 60.5 238 23.9
Aqoxy2G01392 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 3.1e-07 60.5 153 32.7
Lj2P545T26 Lonicera japonica HOM05D000151 ORTHO05D000074 3.1e-07 60.5 246 27.6
Sopen08g030770 Solanum pennellii HOM05D000151 ORTHO05D000074 3.1e-07 60.5 183 27.3
Lj2P486T20 Lonicera japonica HOM05D000151 ORTHO05D000074 4.1e-07 60.1 178 27.0
Lj7P286T40 Lonicera japonica HOM05D000151 ORTHO05D000074 4.1e-07 60.1 169 30.2
MELO3C012271.2 Cucumis melo HOM05D008995 ORTHO05D000074 5.4e-07 59.7 163 25.2
Lj2P493T22 Lonicera japonica HOM05D000151 ORTHO05D000074 7.0e-07 59.3 166 27.7
Lj2P496T12 Lonicera japonica HOM05D000151 ORTHO05D000074 7.0e-07 59.3 165 27.9
Lj2g0018976 Lotus japonicus HOM05D008995 ORTHO05D000074 7.0e-07 59.3 167 27.5
Actinidia15471 Actinidia chinensis HOM05D000151 ORTHO05D000074 9.2e-07 58.9 224 27.7
Lj7P286T29 Lonicera japonica HOM05D000151 ORTHO05D000074 9.2e-07 58.9 188 29.8
Glyma.04G019900 Glycine max HOM05D000151 ORTHO05D000074 1.2e-06 58.5 169 27.8
Prupe.6G178100 Prunus persica HOM05D008995 ORTHO05D000074 1.2e-06 58.5 184 26.6
Sabra02G0011500 Salix brachista HOM05D000151 ORTHO05D000074 1.2e-06 58.5 163 31.3
CAN.G1432.3 Capsicum annuum HOM05D013589 ORTHO05D009136 2.0e-06 57.8 87 34.5
Eucgr.H00631 Eucalyptus grandis HOM05D000151 ORTHO05D000074 2.0e-06 57.8 170 27.1
Dinv35548 Davidia involucrata HOM05D000151 ORTHO05D000074 2.7e-06 57.4 150 32.0
Ciclev10020625m.g Citrus clementina HOM05D000151 ORTHO05D000074 3.5e-06 57.0 159 29.6
Eucgr.J02511 Eucalyptus grandis HOM05D000151 ORTHO05D000074 3.5e-06 57.0 152 30.3
Lj3C74T1 Lonicera japonica HOM05D000151 ORTHO05D000074 3.5e-06 57.0 163 27.6
RcHm_v2.0_Chr6g0254461 Rosa chinensis HOM05D000151 ORTHO05D000074 3.5e-06 57.0 167 30.5
Dinv28382 Davidia involucrata HOM05D000151 ORTHO05D000074 5.9e-06 56.2 148 30.4
Dinv28402 Davidia involucrata HOM05D000151 ORTHO05D000074 5.9e-06 56.2 176 28.4
Sopen04g035970 Solanum pennellii HOM05D000151 ORTHO05D000074 5.9e-06 56.2 163 27.0
Actinidia13986 Actinidia chinensis HOM05D000151 ORTHO05D000074 7.8e-06 55.8 192 27.6
MBI15_g35731_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 7.8e-06 55.8 265 26.8
Manes.01G063800 Manihot esculenta HOM05D000151 ORTHO05D000074 7.8e-06 55.8 205 26.8
Thecc.01G383500 Theobroma cacao HOM05D000151 ORTHO05D000074 7.8e-06 55.8 193 25.4


User provided reference genes

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