Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_25723 Corylus avellana HOM05D005548 ORTHO05D007497 2.8e-258 894.8 459 100.0
Haze_25730 Corylus avellana HOM05D005548 ORTHO05D007497 1.0e-257 892.9 459 99.8
Cfa021563 Carpinus fangiana HOM05D005548 ORTHO05D007497 3.7e-247 857.8 460 96.1
CiPaw.04G163600 Carya illinoinensis HOM05D005548 ORTHO05D007497 8.7e-220 766.9 460 85.2
QL02p085206 Quercus lobata HOM05D005548 ORTHO05D007497 1.5e-216 756.1 463 84.9
Cpa.g.sc23.102 Carica papaya HOM05D005548 ORTHO05D007497 1.2e-200 703.4 466 79.6
Thecc.09G109700 Theobroma cacao HOM05D005548 ORTHO05D007497 2.2e-199 699.1 465 78.9
Eucgr.C01037 Eucalyptus grandis HOM05D005548 ORTHO05D007497 3.8e-199 698.4 465 78.7
TAR383G0243 Trochodendron aralioides HOM05D005548 ORTHO05D007497 4.2e-198 694.9 468 78.4
Dinv41607 Davidia involucrata HOM05D005548 ORTHO05D007497 7.9e-197 690.6 475 78.3
Manes.03G021300 Manihot esculenta HOM05D005548 ORTHO05D007497 7.9e-197 690.6 472 75.6
Potri.018G080900 Populus trichocarpa HOM05D005548 ORTHO05D007497 1.5e-195 686.4 471 75.6
Dinv36636 Davidia involucrata HOM05D005548 ORTHO05D007497 3.7e-194 681.8 467 79.0
Prupe.7G231800 Prunus persica HOM05D005548 ORTHO05D007497 4.8e-194 681.4 464 78.0
Duzib168G0181 Durio zibethinus HOM05D005548 ORTHO05D007497 3.1e-193 678.7 465 76.6
GSVIVG01015386001 Vitis vinifera HOM05D005548 ORTHO05D007497 3.1e-193 678.7 443 79.7
arahy.Tifrunner.gnm1.ann1.HQIA7A Arachis hypogaea HOM05D005548 ORTHO05D007497 6.5e-191 671.0 474 74.1
MD02G1046200 Malus domestica HOM05D005548 ORTHO05D007497 1.4e-190 669.8 466 76.8
RcHm_v2.0_Chr2g0090331 Rosa chinensis HOM05D005548 ORTHO05D007497 4.2e-190 668.3 457 75.3
Hma1.2p1_0518F.1_g171060 Hydrangea macrophylla HOM05D005548 ORTHO05D007497 9.3e-190 667.2 406 82.0
Nn2g11732 Nelumbo nucifera HOM05D005548 ORTHO05D007497 3.6e-189 665.2 466 74.7
Glyma.09G191000 Glycine max HOM05D005548 ORTHO05D007497 6.1e-189 664.5 470 75.1
Actinidia09420 Actinidia chinensis HOM05D005548 ORTHO05D007497 1.3e-188 663.3 472 75.8
Glyma.07G085900 Glycine max HOM05D005548 ORTHO05D007497 1.8e-188 662.9 470 74.7
Sabra18G0068100 Salix brachista HOM05D005548 ORTHO05D007497 5.1e-188 661.4 465 74.8
FAN19G0123 Fragaria x ananassa HOM05D005548 ORTHO05D007497 2.5e-187 659.1 464 74.4
VMungo0464G1126 Vigna mungo HOM05D005548 ORTHO05D007497 4.3e-187 658.3 469 75.1
FvH4_1g04721 Fragaria vesca HOM05D005548 ORTHO05D007497 7.4e-187 657.5 464 74.4
PGR142G0895 Punica granatum HOM05D005548 ORTHO05D007497 7.4e-187 657.5 407 80.3
CSS0009071 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 2.2e-186 656.0 463 76.7
CSS0001162 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 6.3e-186 654.4 463 76.7
Gohir.D07G005900 Gossypium hirsutum HOM05D005548 ORTHO05D007497 8.2e-186 654.1 467 74.1
ClCG00G004520 Citrullus lanatus HOM05D005548 ORTHO05D007497 1.4e-185 653.3 466 74.5
MBI04_g22012_MAGBIO Magnolia biondii HOM05D005548 ORTHO05D007497 1.8e-185 652.9 470 74.3
PGSC0003DMG400000312 Solanum tuberosum HOM05D005548 ORTHO05D007497 1.8e-185 652.9 459 74.5
Gohir.A07G006100 Gossypium hirsutum HOM05D005548 ORTHO05D007497 3.1e-185 652.1 467 74.1
TWI63G0439 Tripterygium wilfordii HOM05D005548 ORTHO05D007497 6.9e-185 651.0 465 74.6
Phvul.004G163700 Phaseolus vulgaris HOM05D005548 ORTHO05D007497 1.5e-184 649.8 469 73.8
Solyc12g007090.2 Solanum lycopersicum HOM05D005548 ORTHO05D007497 2.0e-184 649.4 459 74.7
Sopen12g003070 Solanum pennellii HOM05D005548 ORTHO05D007497 2.0e-184 649.4 459 74.5
FAN26G0240 Fragaria x ananassa HOM05D005548 ORTHO05D007497 2.6e-184 649.0 467 73.4
Gorai.001G005500 Gossypium raimondii HOM05D005548 ORTHO05D007497 2.6e-184 649.0 467 73.7
Atru.chr7.1357 Acer truncatum HOM05D005548 ORTHO05D007497 5.9e-184 647.9 380 85.0
Lj2g0015861 Lotus japonicus HOM05D005548 ORTHO05D007497 1.0e-183 647.1 469 72.7
MELO3C025346.2 Cucumis melo HOM05D005548 ORTHO05D007497 2.2e-183 646.0 487 71.9
EL10Ac8g18489 Beta vulgaris HOM05D005548 ORTHO05D007497 2.9e-183 645.6 459 74.7
FAN23G0305 Fragaria x ananassa HOM05D005548 ORTHO05D007497 7.2e-182 641.0 465 73.3
CAN.G1529.9 Capsicum annuum HOM05D005548 ORTHO05D007497 1.2e-181 640.2 458 74.0
Nitab4.5_0005947g0010 Nicotiana tabacum HOM05D005548 ORTHO05D007497 1.2e-181 640.2 461 74.4
Sed0013441 Sechium edule HOM05D005548 ORTHO05D007497 2.7e-181 639.0 455 73.8
CsaV3_1G024240 Cucumis sativus L. HOM05D005548 ORTHO05D007497 3.6e-181 638.6 493 70.0
Lalb_Chr14g0371531 Lupinus albus HOM05D005548 ORTHO05D007497 3.9e-180 635.2 463 73.0
MD15G1184300 Malus domestica HOM05D005548 ORTHO05D007497 2.0e-179 632.9 462 73.2
Cc06_g09710 Coffea canephora HOM05D005548 ORTHO05D007497 3.3e-179 632.1 480 72.3
COL.COLO4_34874 Corchorus olitorius HOM05D005548 ORTHO05D007497 3.3e-179 632.1 374 84.5
Actinidia20374 Actinidia chinensis HOM05D005548 ORTHO05D007497 4.4e-179 631.7 381 83.2
Lalb_Chr22g0352791 Lupinus albus HOM05D005548 ORTHO05D007497 9.7e-179 630.6 465 71.6
Ca_03976_v3 Cicer arietinum L. HOM05D005548 ORTHO05D007497 1.4e-177 626.7 464 71.1
DCAR_010452 Daucus carota HOM05D005548 ORTHO05D007497 2.4e-177 625.9 459 72.3
Sc18g0001240 Simmondsia chinensis HOM05D005548 ORTHO05D007497 2.4e-177 625.9 466 71.7
THA.LOC104811114 Tarenaya hassleriana HOM05D005548 ORTHO05D007497 4.1e-177 625.2 466 70.8
Hund26198 Selenicereus undatus HOM05D005548 ORTHO05D007497 5.3e-177 624.8 467 71.3
Peaxi162Scf00546g00024 Petunia axillaris HOM05D005548 ORTHO05D007497 7.2e-174 614.4 461 71.6
Lj7C651T8 Lonicera japonica HOM05D005548 ORTHO05D007497 1.6e-173 613.2 480 70.0
MSTRG.26421 Avicennia marina HOM05D005548 ORTHO05D007497 2.7e-173 612.5 424 73.8
Migut.K00455 Erythranthe guttata HOM05D005548 ORTHO05D007497 2.7e-173 612.5 457 70.7
Aqoxy7G01651 Aquilegia oxysepala HOM05D005548 ORTHO05D007497 3.6e-173 612.1 467 70.4
TPR.G18453 Trifolium pratense HOM05D005548 ORTHO05D007497 1.8e-172 609.8 465 69.9
PSO832G1226 Papaver somniferum HOM05D005548 ORTHO05D007497 1.1e-171 607.1 474 67.9
AUR62010987 Chenopodium quinoa HOM05D005548 ORTHO05D007497 2.6e-171 605.9 373 79.1
PSO782G1908 Papaver somniferum HOM05D005548 ORTHO05D007497 2.6e-171 605.9 459 69.3
Nitab4.5_0002904g0080 Nicotiana tabacum HOM05D005548 ORTHO05D007497 5.7e-171 604.7 461 71.8
SalBow1G6148 Salvia bowleyana HOM05D005548 ORTHO05D007497 1.7e-170 603.2 468 70.5
Lsat_1_v5_gn_8_95001 Lactuca sativa HOM05D005548 ORTHO05D007497 2.8e-170 602.4 456 70.4
HanXRQChr06g0179971 Helianthus annuus HOM05D005548 ORTHO05D007497 7.0e-169 597.8 437 70.9
Psat1g042920 Pisum sativum HOM05D005548 ORTHO05D007497 1.2e-168 597.0 467 67.0
Medtr6g088460 Medicago truncatula HOM05D005548 ORTHO05D007497 1.6e-168 596.7 459 67.8
CARHR193360 Cardamine hirsuta HOM05D005548 ORTHO05D007497 1.7e-167 593.2 465 66.9
Duzib150G0071 Durio zibethinus HOM05D005548 ORTHO05D007497 8.5e-167 590.9 458 71.0
ATR0315G003 Amborella trichopoda HOM05D005548 ORTHO05D007497 1.1e-166 590.5 391 75.4
AT5G19540 Arabidopsis thaliana HOM05D005548 ORTHO05D007497 1.5e-166 590.1 467 67.0
Carub.0006s1789 Capsella rubella HOM05D005548 ORTHO05D007497 1.5e-166 590.1 451 67.6
AL6G31050 Arabidopsis lyrata HOM05D005548 ORTHO05D007497 1.6e-165 586.6 427 69.6
BcaB05g23389 Brassica carinata HOM05D005548 ORTHO05D007497 4.7e-165 585.1 410 71.7
Sp6g24840 Schrenkiella parvula HOM05D005548 ORTHO05D007497 8.0e-165 584.3 469 66.5
Thhalv10013469m.g Eutrema salsugineum HOM05D005548 ORTHO05D007497 3.0e-164 582.4 450 66.9
ECA233G4048 Erigeron canadensis HOM05D005548 ORTHO05D007497 1.2e-163 580.5 379 76.8
Aa31LG4G18070 Aethionema arabicum HOM05D005548 ORTHO05D007497 5.7e-163 578.2 467 66.0
CDE02G3701 Ceratophyllum demersum HOM05D005548 ORTHO05D007497 2.8e-162 575.9 458 65.5
SGA_v2.0_scaffold307G48040 Striga asiatica HOM05D005548 ORTHO05D007497 1.8e-161 573.2 396 73.2
unitig_899.g15439 Utricularia gibba HOM05D005548 ORTHO05D007497 4.1e-161 572.0 404 72.3
BolC2t06964H Brassica oleracea HOM05D005548 ORTHO05D007497 1.2e-160 570.5 469 66.1
BcaC03g13685 Brassica carinata HOM05D005548 ORTHO05D007497 2.0e-160 569.7 469 65.9
BNapus_Darmor_BZH_scaffold_38p02320 Brassica napus HOM05D005548 ORTHO05D007497 2.0e-160 569.7 469 65.9
A02p05630 Brassica napus HOM05D005548 ORTHO05D007497 5.9e-160 568.2 467 64.9
BraA02t05515Z Brassica rapa HOM05D005548 ORTHO05D007497 5.9e-160 568.2 467 64.9
FAN28G1005 Fragaria x ananassa HOM05D005548 ORTHO05D007497 6.1e-149 531.6 391 73.4
vmacro20704 Vaccinium macrocarpon HOM05D005548 ORTHO05D007497 8.8e-148 527.7 457 62.4
Rhsim01G0095300 Rhododendron simsii HOM05D005548 ORTHO05D007497 4.4e-147 525.4 463 60.0
Hma1.2p1_0518F.1_g171070 Hydrangea macrophylla HOM05D005548 ORTHO05D007497 9.8e-147 524.2 315 82.9
Os08g0387500 Oryza sativa ssp. japonica HOM05D005548 ORTHO05D007497 2.9e-143 512.7 396 64.9
Zm00001eb042080 Zea mays HOM05D005548 ORTHO05D007497 1.5e-142 510.4 451 60.8
SalBow1G2309 Salvia bowleyana HOM05D005548 ORTHO05D007497 1.9e-142 510.0 345 76.8
HPP92_019989 Vanilla planifolia HOM05D005548 ORTHO05D004628 9.9e-115 417.9 392 57.7
AUR62021496 Chenopodium quinoa HOM05D005548 ORTHO05D007497 1.6e-112 410.6 269 76.2
Pp3c17_15530 Physcomitrium patens HOM05D005548 ORTHO05D007497 5.2e-108 395.6 397 52.6
Mapoly0115s0052 Marchantia polymorpha HOM05D005548 ORTHO05D007497 6.4e-106 388.7 385 53.5
Pp3c17_15540 Physcomitrium patens HOM05D005548 ORTHO05D007497 3.2e-105 386.3 386 52.6
AagrBONN_evm.TU.Sc2ySwM_344.3922 Anthoceros agrestis HOM05D005548 ORTHO05D007497 1.0e-103 381.3 407 47.9
SMO367G0640 Selaginella moellendorffii HOM05D005548 ORTHO05D007497 3.2e-97 359.8 399 50.9
SEGI_13755 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 2.1e-96 357.1 372 50.0
SEGI_11261 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 2.1e-80 303.9 317 49.8
CBR_g3024 Chara braunii HOM05D005548 ORTHO05D007497 1.8e-79 300.8 383 47.5
Rhsim01G0096400 Rhododendron simsii HOM05D005548 ORTHO05D007497 4.8e-77 292.7 340 45.9
AUR62021498 Chenopodium quinoa HOM05D005548 ORTHO05D007497 4.2e-57 226.5 138 75.4
Ciclev10010350m.g Citrus clementina HOM05D005548 ORTHO05D007497 1.6e-51 208.0 321 44.2
Nn8g39172 Nelumbo nucifera HOM05D005548 ORTHO05D007497 1.6e-43 181.4 104 85.6
Oeu048670.1 Olea europaea HOM05D005548 ORTHO05D007497 1.7e-42 177.9 99 80.8
arahy.Tifrunner.gnm1.ann1.VN1956 Arachis hypogaea HOM05D005548 ORTHO05D007497 3.4e-30 137.1 143 58.7
CSS0016063 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 9.2e-28 129.0 83 81.9
CSS0021555 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 9.2e-28 129.0 73 86.3
CSS0042262 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 4.5e-27 126.7 83 80.7
Ah.12g056490 Amaranthus hybridus HOM05D005548 ORTHO05D007497 2.3e-26 124.4 82 75.6
SEGI_23308 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 2.9e-26 124.0 281 29.5
SEGI_35049 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 4.3e-25 120.2 257 29.6
Dinv06981 Davidia involucrata HOM05D005548 ORTHO05D045157 1.2e-24 118.6 81 76.5
CSS0011769 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 4.0e-23 113.6 141 56.7
MCO02G293 Micromonas commoda HOM05D005548 ORTHO05D007497 6.8e-23 112.8 389 29.8
CSS0008802 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 1.1e-17 95.5 132 53.0
CSS0008633 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 3.6e-16 90.5 73 67.1
SalBow1G1492 Salvia bowleyana HOM05D005548 ORTHO05D007497 1.5e-14 85.1 121 43.0
TPR.G36012 Trifolium pratense HOM05D005548 ORTHO05D007497 8.9e-07 59.3 117 36.8


User provided reference genes

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