Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_25705 Corylus avellana HOM05D001384 ORTHO05D001215 7.1e-24 113.2 63 100.0
Haze_25702 Corylus avellana HOM05D001384 ORTHO05D001215 4.3e-21 104.0 63 92.1
Cfa003266 Carpinus fangiana HOM05D001384 ORTHO05D001215 2.1e-15 85.1 84 67.9
Ciclev10010340m.g Citrus clementina HOM05D001384 ORTHO05D001215 4.8e-12 73.9 65 67.7
Manes.03G019400 Manihot esculenta HOM05D001384 ORTHO05D001215 6.9e-11 70.1 66 65.2
Prupe.7G229500 Prunus persica HOM05D001384 ORTHO05D001215 1.5e-10 68.9 63 73.0
Cc06_g09580 Coffea canephora HOM05D001384 ORTHO05D001215 3.4e-10 67.8 68 64.7
MBI04_g08938_MAGBIO Magnolia biondii HOM05D001384 ORTHO05D001215 4.5e-10 67.4 63 65.1
Thecc.09G111900 Theobroma cacao HOM05D001384 ORTHO05D001215 5.9e-10 67.0 67 59.7
CiPaw.03G233000 Carya illinoinensis HOM05D001384 ORTHO05D001215 1.0e-09 66.2 64 65.6
Potri.018G078801 Populus trichocarpa HOM05D001384 ORTHO05D001215 1.3e-09 65.9 65 64.6
RcHm_v2.0_Chr2g0090651 Rosa chinensis HOM05D001384 ORTHO05D001215 1.3e-09 65.9 62 62.9
Atru.chr7.1336 Acer truncatum HOM05D001384 ORTHO05D001215 3.8e-09 64.3 65 64.6
MD15G1187000 Malus domestica HOM05D001384 ORTHO05D001215 5.0e-09 63.9 63 63.5
EL10Ac8g18508 Beta vulgaris HOM05D001384 ORTHO05D001215 1.1e-08 62.8 63 58.7
SalBow1G1089 Salvia bowleyana HOM05D001384 ORTHO05D001215 1.1e-08 62.8 57 70.2
HanXRQChr05g0138071 Helianthus annuus HOM05D001384 ORTHO05D001215 1.4e-08 62.4 65 58.5
FAN23G3069 Fragaria x ananassa HOM05D001384 ORTHO05D001215 2.5e-08 61.6 62 61.3
FAN26G0268 Fragaria x ananassa HOM05D001384 ORTHO05D001215 2.5e-08 61.6 62 61.3
MD02G1048700 Malus domestica HOM05D001384 ORTHO05D001215 2.5e-08 61.6 64 62.5
FvH4_1g05040 Fragaria vesca HOM05D001384 ORTHO05D001215 3.2e-08 61.2 56 66.1
FAN19G2390 Fragaria x ananassa HOM05D001384 ORTHO05D001215 3.2e-08 61.2 56 66.1
FAN28G2867 Fragaria x ananassa HOM05D001384 ORTHO05D001215 3.2e-08 61.2 62 59.7
Manes.16G116900 Manihot esculenta HOM05D001384 ORTHO05D001215 4.2e-08 60.8 66 62.1
Nn2g11765 Nelumbo nucifera HOM05D001384 ORTHO05D001215 4.2e-08 60.8 67 55.2
Nn8g39211 Nelumbo nucifera HOM05D001384 ORTHO05D001215 4.2e-08 60.8 67 58.2
Glyma.09G189700 Glycine max HOM05D001384 ORTHO05D001215 5.5e-08 60.5 65 53.8
MBI06_g32761_MAGBIO Magnolia biondii HOM05D001384 ORTHO05D001215 7.2e-08 60.1 56 51.8
Oeu002227.1 Olea europaea HOM05D001384 ORTHO05D001215 7.2e-08 60.1 60 60.0
Peaxi162Scf00546g10017 Petunia axillaris HOM05D001384 ORTHO05D001215 7.2e-08 60.1 65 60.0
Sc08g0007440 Simmondsia chinensis HOM05D001384 ORTHO05D001215 7.2e-08 60.1 62 58.1
Gohir.D05G024100 Gossypium hirsutum HOM05D001384 ORTHO05D001215 9.4e-08 59.7 61 60.7
Lsat_1_v5_gn_8_95100 Lactuca sativa HOM05D001384 ORTHO05D001215 9.4e-08 59.7 61 62.3
Sed0004504 Sechium edule HOM05D001384 ORTHO05D001215 9.4e-08 59.7 66 56.1
THA.LOC104821373 Tarenaya hassleriana HOM05D001384 ORTHO05D001215 9.4e-08 59.7 52 57.7
DCAR_028719 Daucus carota HOM05D001384 ORTHO05D001215 1.6e-07 58.9 64 54.7
CsaV3_2G002300 Cucumis sativus L. HOM05D001384 ORTHO05D001215 2.1e-07 58.5 65 50.8
Gohir.A05G022600 Gossypium hirsutum HOM05D001384 ORTHO05D001215 2.1e-07 58.5 61 59.0
Gorai.009G024200 Gossypium raimondii HOM05D001384 ORTHO05D001215 2.1e-07 58.5 61 59.0
CiPaw.11G124600 Carya illinoinensis HOM05D001384 ORTHO05D001215 2.7e-07 58.2 52 53.8
Eucgr.C03852 Eucalyptus grandis HOM05D001384 ORTHO05D001215 2.7e-07 58.2 56 60.7
MELO3C004554.2 Cucumis melo HOM05D001384 ORTHO05D001215 4.6e-07 57.4 65 49.2
Gohir.A06G061600 Gossypium hirsutum HOM05D001384 ORTHO05D001215 4.6e-07 57.4 65 55.4
MBI01_g34159_MAGBIO Magnolia biondii HOM05D001384 ORTHO05D001215 4.6e-07 57.4 62 56.5
Oeu055863.1 Olea europaea HOM05D001384 ORTHO05D001215 4.6e-07 57.4 66 54.5
AL4G45630 Arabidopsis lyrata HOM05D001384 ORTHO05D001215 6.1e-07 57.0 52 55.8
AT2G46330 Arabidopsis thaliana HOM05D001384 ORTHO05D001215 6.1e-07 57.0 52 55.8
AT5G24105 Arabidopsis thaliana HOM05D001384 ORTHO05D001215 6.1e-07 57.0 57 49.1
EL10Ac3g05350 Beta vulgaris HOM05D001384 ORTHO05D001215 6.1e-07 57.0 60 50.0
TAR375G0324 Trochodendron aralioides HOM05D001384 ORTHO05D001215 6.1e-07 57.0 54 51.9
Aa31LG10G15620 Aethionema arabicum HOM05D001384 ORTHO05D001215 1.0e-06 56.2 54 50.0
arahy.Tifrunner.gnm1.ann1.29029X Arachis hypogaea HOM05D001384 ORTHO05D001215 1.0e-06 56.2 64 46.9
DCAR_006964 Daucus carota HOM05D001384 ORTHO05D001215 1.0e-06 56.2 56 46.4
Hund26160 Selenicereus undatus HOM05D001384 ORTHO05D001215 1.0e-06 56.2 66 54.5
Glyma.07G087200 Glycine max HOM05D001384 ORTHO05D001215 1.4e-06 55.8 65 49.2
Rhsim03G0243700 Rhododendron simsii HOM05D001384 ORTHO05D001215 1.4e-06 55.8 108 38.0
BcaNung01209 Brassica carinata HOM05D001384 ORTHO05D001215 1.8e-06 55.5 56 53.6
Carub.0004s2903 Capsella rubella HOM05D001384 ORTHO05D001215 1.8e-06 55.5 52 53.8
COL.COLO4_35659 Corchorus olitorius HOM05D001384 ORTHO05D001215 1.8e-06 55.5 41 65.9
HanXRQChr12g0355481 Helianthus annuus HOM05D001384 ORTHO05D001215 1.8e-06 55.5 61 59.0
HanXRQChr13g0418071 Helianthus annuus HOM05D001384 ORTHO05D001215 1.8e-06 55.5 61 59.0
HanXRQChr13g0419271 Helianthus annuus HOM05D001384 ORTHO05D001215 1.8e-06 55.5 61 59.0
Prupe.2G306800 Prunus persica HOM05D001384 ORTHO05D001215 1.8e-06 55.5 57 45.6
COL.COLO4_34907 Corchorus olitorius HOM05D001384 ORTHO05D001215 2.3e-06 55.1 64 51.6
FvH4_7g30990 Fragaria vesca HOM05D001384 ORTHO05D001215 2.3e-06 55.1 62 53.2
Peaxi162Scf00099g01816 Petunia axillaris HOM05D001384 ORTHO05D001215 2.3e-06 55.1 60 46.7
arahy.Tifrunner.gnm1.ann1.B0IVK2 Arachis hypogaea HOM05D001384 ORTHO05D001215 3.0e-06 54.7 64 45.3
Dinv43894 Davidia involucrata HOM05D001384 ORTHO05D001215 3.0e-06 54.7 60 46.7
Thhalv10001752m.g Eutrema salsugineum HOM05D001384 ORTHO05D001215 3.0e-06 54.7 52 53.8
PGSC0003DMG400000317 Solanum tuberosum HOM05D001384 ORTHO05D001215 3.0e-06 54.7 55 61.8
BcaB01g03229 Brassica carinata HOM05D001384 ORTHO05D001215 3.9e-06 54.3 52 53.8
CAN.G1710.1 Capsicum annuum HOM05D001384 ORTHO05D001215 3.9e-06 54.3 67 56.7
ClCG07G014860 Citrullus lanatus HOM05D001384 ORTHO05D001215 3.9e-06 54.3 48 52.1
Duzib205G1079 Durio zibethinus HOM05D001384 ORTHO05D001215 3.9e-06 54.3 62 46.8
HanXRQChr02g0045451 Helianthus annuus HOM05D001384 ORTHO05D001215 3.9e-06 54.3 56 57.1
Lsat_1_v5_gn_5_101580 Lactuca sativa HOM05D001384 ORTHO05D001215 3.9e-06 54.3 62 53.2
Lj2g0011378 Lotus japonicus HOM05D001384 ORTHO05D001215 3.9e-06 54.3 65 49.2
Potri.012G032000 Populus trichocarpa HOM05D001384 ORTHO05D001215 3.9e-06 54.3 53 54.7
Sp4g28370 Schrenkiella parvula HOM05D001384 ORTHO05D001215 3.9e-06 54.3 52 53.8
BcaB01g03224 Brassica carinata HOM05D001384 ORTHO05D001215 5.1e-06 53.9 52 53.8
BcaB01g03227 Brassica carinata HOM05D001384 ORTHO05D001215 5.1e-06 53.9 41 58.5
BcaC02g12698 Brassica carinata HOM05D001384 ORTHO05D001215 5.1e-06 53.9 52 53.8
BcaC04g23523 Brassica carinata HOM05D001384 ORTHO05D001215 5.1e-06 53.9 65 50.8
A03p25570 Brassica napus HOM05D001384 ORTHO05D001215 5.1e-06 53.9 52 53.8
A09p06620 Brassica napus HOM05D001384 ORTHO05D001215 5.1e-06 53.9 65 50.8
C09p07390 Brassica napus HOM05D001384 ORTHO05D001215 5.1e-06 53.9 65 50.8
BolC9t53653H Brassica oleracea HOM05D001384 ORTHO05D001215 5.1e-06 53.9 65 50.8
BraA03t11773Z Brassica rapa HOM05D001384 ORTHO05D001215 5.1e-06 53.9 52 53.8
BraA09t36309Z Brassica rapa HOM05D001384 ORTHO05D001215 5.1e-06 53.9 65 50.8
Carub.0006s2183 Capsella rubella HOM05D001384 ORTHO05D001215 5.1e-06 53.9 64 46.9
Gohir.D06G059900 Gossypium hirsutum HOM05D001384 ORTHO05D001215 5.1e-06 53.9 69 50.7
Gorai.010G069700 Gossypium raimondii HOM05D001384 ORTHO05D001215 5.1e-06 53.9 69 50.7
HanXRQChr09g0256511 Helianthus annuus HOM05D001384 ORTHO05D001215 5.1e-06 53.9 61 57.4
Peaxi162Scf00498g00030 Petunia axillaris HOM05D001384 ORTHO05D001215 5.1e-06 53.9 63 54.0
Atru.chr1.270 Acer truncatum HOM05D001384 ORTHO05D001215 6.7e-06 53.5 53 49.1
CsaV3_4G006390 Cucumis sativus L. HOM05D001384 ORTHO05D001215 6.7e-06 53.5 54 51.9
MBI07_g20448_MAGBIO Magnolia biondii HOM05D001384 ORTHO05D001215 6.7e-06 53.5 55 49.1
Nitab4.5_0008261g0010 Nicotiana tabacum HOM05D001384 ORTHO05D001215 6.7e-06 53.5 59 49.2
Peaxi162Scf00560g00128 Petunia axillaris HOM05D001384 ORTHO05D001215 6.7e-06 53.5 64 54.7
Phvul.001G079000 Phaseolus vulgaris HOM05D001384 ORTHO05D001215 6.7e-06 53.5 49 51.0
RcHm_v2.0_Chr2g0092451 Rosa chinensis HOM05D001384 ORTHO05D001215 6.7e-06 53.5 65 46.2
AT3G61640 Arabidopsis thaliana HOM05D001384 ORTHO05D001215 8.8e-06 53.1 54 50.0
BcaC01g05077 Brassica carinata HOM05D001384 ORTHO05D001215 8.8e-06 53.1 52 51.9
BcaC02g12816 Brassica carinata HOM05D001384 ORTHO05D001215 8.8e-06 53.1 52 53.8
A05p01460 Brassica napus HOM05D001384 ORTHO05D001215 8.8e-06 53.1 52 53.8
C03p30500 Brassica napus HOM05D001384 ORTHO05D001215 8.8e-06 53.1 52 51.9
C04p01650 Brassica napus HOM05D001384 ORTHO05D001215 8.8e-06 53.1 52 53.8
BolC4t21817H Brassica oleracea HOM05D001384 ORTHO05D001215 8.8e-06 53.1 52 53.8
BraA05t19143Z Brassica rapa HOM05D001384 ORTHO05D001215 8.8e-06 53.1 52 53.8
GSVIVG01028741001 Vitis vinifera HOM05D001384 ORTHO05D001215 8.8e-06 53.1 57 52.6


User provided reference genes

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