Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_25504 Corylus avellana HOM05D003622 ORTHO05D004453 4.2e-31 137.9 97 100.0
Cfa003424 Carpinus fangiana HOM05D003622 ORTHO05D004453 4.2e-15 84.7 81 85.2
QL02p089888 Quercus lobata HOM05D003622 ORTHO05D004453 7.4e-12 73.9 52 75.0
CiPaw.04G174900 Carya illinoinensis HOM05D003622 ORTHO05D004453 8.2e-11 70.5 67 61.2
CiPaw.03G248700 Carya illinoinensis HOM05D003622 ORTHO05D004453 1.1e-10 70.1 52 69.2
CANSAT11G0379 Cannabis sativa HOM05D003622 ORTHO05D004453 4.1e-10 68.2 52 67.3
Lalb_Chr13g0301561 Lupinus albus HOM05D003622 ORTHO05D004453 4.1e-10 68.2 51 66.7
Gorai.004G107500 Gossypium raimondii HOM05D003622 ORTHO05D004453 2.0e-09 65.9 51 68.6
Cpa.g.sc46.42 Carica papaya HOM05D003622 ORTHO05D004453 2.6e-09 65.5 51 68.6
COL.COLO4_35161 Corchorus olitorius HOM05D003622 ORTHO05D004453 3.4e-09 65.1 41 82.9
Gohir.A08G088500 Gossypium hirsutum HOM05D003622 ORTHO05D004453 5.9e-09 64.3 51 66.7
Thecc.09G132400 Theobroma cacao HOM05D003622 ORTHO05D004453 5.9e-09 64.3 51 68.6
Phvul.003G169000 Phaseolus vulgaris HOM05D003622 ORTHO05D004453 7.6e-09 63.9 51 64.7
VMungo1215G2226 Vigna mungo HOM05D003622 ORTHO05D004453 1.0e-08 63.5 51 64.7
Manes.14G116100 Manihot esculenta HOM05D003622 ORTHO05D004453 1.3e-08 63.2 52 63.5
arahy.Tifrunner.gnm1.ann1.HD4WN1 Arachis hypogaea HOM05D003622 ORTHO05D004453 1.7e-08 62.8 52 61.5
Gohir.D08G099700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 1.7e-08 62.8 51 66.7
Lalb_Chr12g0198231 Lupinus albus HOM05D003622 ORTHO05D004453 1.7e-08 62.8 52 59.6
GSVIVG01015594001 Vitis vinifera HOM05D003622 ORTHO05D004453 1.7e-08 62.8 52 63.5
Glyma.13G160300 Glycine max HOM05D003622 ORTHO05D004453 2.2e-08 62.4 51 62.7
Duzib187G1700 Durio zibethinus HOM05D003622 ORTHO05D004453 2.9e-08 62.0 51 62.7
Gohir.D13G206400 Gossypium hirsutum HOM05D003622 ORTHO05D004453 2.9e-08 62.0 48 68.8
Gorai.013G235300 Gossypium raimondii HOM05D003622 ORTHO05D004453 2.9e-08 62.0 48 68.8
Glyma.17G111200 Glycine max HOM05D003622 ORTHO05D004453 5.0e-08 61.2 47 66.0
Lalb_Chr07g0179261 Lupinus albus HOM05D003622 ORTHO05D004453 1.4e-07 59.7 51 60.8
Nn2g12120 Nelumbo nucifera HOM05D003622 ORTHO05D004453 1.4e-07 59.7 81 44.4
Duzib150G0473 Durio zibethinus HOM05D003622 ORTHO05D004453 1.9e-07 59.3 51 58.8
Cc06_g08050 Coffea canephora HOM05D003622 ORTHO05D004453 2.5e-07 58.9 51 58.8
Gohir.A06G053800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 3.2e-07 58.5 51 60.8
Gohir.A13G200800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 3.2e-07 58.5 48 64.6
Lj4g0015305 Lotus japonicus HOM05D003622 ORTHO05D004453 3.2e-07 58.5 51 56.9
THA.LOC104808966 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 4.2e-07 58.2 52 57.7
vmacro06154 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 4.2e-07 58.2 52 57.7
AUR62011177 Chenopodium quinoa HOM05D003622 ORTHO05D004453 5.5e-07 57.8 51 62.7
arahy.Tifrunner.gnm1.ann1.DJE2D0 Arachis hypogaea HOM05D003622 ORTHO05D004453 7.2e-07 57.4 47 61.7
Gohir.D06G052700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 7.2e-07 57.4 51 58.8
Gorai.010G061100 Gossypium raimondii HOM05D003622 ORTHO05D004453 7.2e-07 57.4 51 58.8
Os09g0123100 Oryza sativa ssp. japonica HOM05D003622 ORTHO05D004453 7.2e-07 57.4 51 54.9
Actinidia21950 Actinidia chinensis HOM05D003622 ORTHO05D004453 9.3e-07 57.0 52 55.8
AUR62013307 Chenopodium quinoa HOM05D003622 ORTHO05D004453 9.3e-07 57.0 48 60.4
MELO3C010313.2 Cucumis melo HOM05D003622 ORTHO05D004453 9.3e-07 57.0 47 63.8
Duzib168G1318 Durio zibethinus HOM05D003622 ORTHO05D004453 9.3e-07 57.0 51 62.7
Manes.06G047000 Manihot esculenta HOM05D003622 ORTHO05D004453 1.2e-06 56.6 52 57.7
Psat0s188g0040 Pisum sativum HOM05D003622 ORTHO05D004453 1.2e-06 56.6 45 60.0
Sed0008371 Sechium edule HOM05D003622 ORTHO05D004453 1.2e-06 56.6 48 60.4
MSTRG.26437 Avicennia marina HOM05D003622 ORTHO05D004453 2.1e-06 55.8 49 57.1
CAN.G1266.4 Capsicum annuum HOM05D003622 ORTHO05D004453 2.1e-06 55.8 51 54.9
Nitab4.5_0002008g0030 Nicotiana tabacum HOM05D003622 ORTHO05D004453 2.1e-06 55.8 51 54.9
Nitab4.5_0003393g0070 Nicotiana tabacum HOM05D003622 ORTHO05D004453 2.1e-06 55.8 51 54.9
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 2.7e-06 55.5 52 48.1
Peaxi162Scf00088g01327 Petunia axillaris HOM05D003622 ORTHO05D004453 2.7e-06 55.5 51 54.9
Hund26549 Selenicereus undatus HOM05D003622 ORTHO05D004453 2.7e-06 55.5 48 54.2
unitig_748.g7166 Utricularia gibba HOM05D003622 ORTHO05D004453 2.7e-06 55.5 51 54.9
CSS0022552 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 3.6e-06 55.1 52 51.9
Migut.J01215 Erythranthe guttata HOM05D003622 ORTHO05D004453 3.6e-06 55.1 51 52.9
Eucgr.C01387 Eucalyptus grandis HOM05D003622 ORTHO05D004453 3.6e-06 55.1 51 54.9
TAR625G0175 Trochodendron aralioides HOM05D003622 ORTHO05D004453 3.6e-06 55.1 50 54.0
CDE06G0586 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 4.6e-06 54.7 51 51.0
CDE03G0113 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 6.1e-06 54.3 51 51.0
CsaV3_1G026740 Cucumis sativus L. HOM05D003622 ORTHO05D004453 6.1e-06 54.3 47 59.6
Rhsim01G0061400 Rhododendron simsii HOM05D003622 ORTHO05D004453 6.1e-06 54.3 53 45.3
SGA_v2.0_scaffold464G52002 Striga asiatica HOM05D003622 ORTHO05D004453 6.1e-06 54.3 51 51.0
Medtr4g115350 Medicago truncatula HOM05D003622 ORTHO05D004453 7.9e-06 53.9 51 54.9
Solyc07g007890.3 Solanum lycopersicum HOM05D003622 ORTHO05D004453 7.9e-06 53.9 51 52.9
Sopen07g003790 Solanum pennellii HOM05D003622 ORTHO05D004453 7.9e-06 53.9 51 52.9
PGSC0003DMG400030907 Solanum tuberosum HOM05D003622 ORTHO05D004453 7.9e-06 53.9 51 52.9
THA.LOC104826553 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 7.9e-06 53.9 52 51.9


User provided reference genes

Program Settings