Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_25466 Corylus avellana HOM05D005237 ORTHO05D006189 2.5e-98 362.1 175 100.0
Haze_25470 Corylus avellana HOM05D005237 ORTHO05D006189 2.5e-98 362.1 175 100.0
QL02p090325 Quercus lobata HOM05D005237 ORTHO05D006189 2.1e-94 349.0 174 96.6
CiPaw.03G250600 Carya illinoinensis HOM05D005237 ORTHO05D006189 8.2e-94 347.1 175 94.9
Eucgr.C04376 Eucalyptus grandis HOM05D005237 ORTHO05D006189 1.2e-92 343.2 175 93.7
Duzib150G0783 Durio zibethinus HOM05D005237 ORTHO05D006189 3.4e-92 341.7 175 93.7
Prupe.7G251500 Prunus persica HOM05D005237 ORTHO05D006189 3.4e-92 341.7 174 93.7
Actinidia07336 Actinidia chinensis HOM05D005237 ORTHO05D006189 4.5e-92 341.3 175 94.3
Glyma.17G108800 Glycine max HOM05D005237 ORTHO05D006189 1.7e-91 339.3 175 92.0
Dinv41456 Davidia involucrata HOM05D005237 ORTHO05D006189 2.2e-91 339.0 175 93.1
Lalb_Chr12g0198311 Lupinus albus HOM05D005237 ORTHO05D006189 2.2e-91 339.0 175 91.4
vmacro07739 Vaccinium macrocarpon HOM05D005237 ORTHO05D006189 2.2e-91 339.0 174 93.7
GSVIVG01012837001 Vitis vinifera HOM05D005237 ORTHO05D006189 5.0e-91 337.8 175 93.1
MD02G1020300 Malus domestica HOM05D005237 ORTHO05D006189 6.5e-91 337.4 174 92.0
Lj7A437T44 Lonicera japonica HOM05D005237 ORTHO05D006189 8.4e-91 337.0 173 93.6
Rhsim01G0059600 Rhododendron simsii HOM05D005237 ORTHO05D006189 8.4e-91 337.0 175 92.6
Ciclev10009685m.g Citrus clementina HOM05D005237 ORTHO05D006189 1.1e-90 336.7 175 93.1
Lalb_Chr13g0301391 Lupinus albus HOM05D005237 ORTHO05D006189 1.1e-90 336.7 175 91.4
Glyma.13G162500 Glycine max HOM05D005237 ORTHO05D006189 1.4e-90 336.3 175 91.4
TWI32G1192 Tripterygium wilfordii HOM05D005237 ORTHO05D006189 2.5e-90 335.5 175 90.9
Cpa.g.sc277.15 Carica papaya HOM05D005237 ORTHO05D006189 3.2e-90 335.1 175 92.6
Lj4g0017742 Lotus japonicus HOM05D005237 ORTHO05D006189 3.2e-90 335.1 175 91.4
MD15G1163100 Malus domestica HOM05D005237 ORTHO05D006189 3.2e-90 335.1 174 91.4
Medtr4g115900 Medicago truncatula HOM05D005237 ORTHO05D006189 1.2e-89 333.2 172 91.9
Oeu000523.1 Olea europaea HOM05D005237 ORTHO05D006189 1.2e-89 333.2 175 90.3
CsaV3_2G003270 Cucumis sativus L. HOM05D005237 ORTHO05D006189 1.6e-89 332.8 175 90.3
Gohir.A08G089300 Gossypium hirsutum HOM05D005237 ORTHO05D006189 2.1e-89 332.4 175 90.9
Phvul.003G171200 Phaseolus vulgaris HOM05D005237 ORTHO05D006189 2.1e-89 332.4 175 90.3
arahy.Tifrunner.gnm1.ann1.E2H6AC Arachis hypogaea HOM05D005237 ORTHO05D006189 2.7e-89 332.0 175 90.3
ClCG11G003410 Citrullus lanatus HOM05D005237 ORTHO05D006189 2.7e-89 332.0 175 90.3
FvH4_3g33280 Fragaria vesca HOM05D005237 ORTHO05D006189 3.5e-89 331.6 174 92.0
FAN11G2421 Fragaria x ananassa HOM05D005237 ORTHO05D006189 3.5e-89 331.6 174 92.0
PGR102G2022 Punica granatum HOM05D005237 ORTHO05D006189 6.1e-89 330.9 172 92.4
FAN21G0596 Fragaria x ananassa HOM05D005237 ORTHO05D006189 7.9e-89 330.5 174 92.0
CiPaw.04G176700 Carya illinoinensis HOM05D005237 ORTHO05D006189 3.0e-88 328.6 175 90.9
Psat0s3428g0040 Pisum sativum HOM05D005237 ORTHO05D006189 3.0e-88 328.6 172 90.1
Gorai.004G108300 Gossypium raimondii HOM05D005237 ORTHO05D006189 3.9e-88 328.2 174 90.8
CANSAT11G1632 Cannabis sativa HOM05D005237 ORTHO05D006189 6.7e-88 327.4 175 89.1
Potri.018G123100 Populus trichocarpa HOM05D005237 ORTHO05D006189 6.7e-88 327.4 172 90.1
Sabra18G0104800 Salix brachista HOM05D005237 ORTHO05D006189 1.5e-87 326.2 172 90.1
Sed0005481 Sechium edule HOM05D005237 ORTHO05D006189 2.5e-87 325.5 175 88.6
SGA_v2.0_scaffold37G14721 Striga asiatica HOM05D005237 ORTHO05D006189 2.5e-87 325.5 175 89.1
Nn8g40617 Nelumbo nucifera HOM05D005237 ORTHO05D006189 3.3e-87 325.1 172 89.5
Peaxi162Scf00088g00918 Petunia axillaris HOM05D005237 ORTHO05D006189 3.3e-87 325.1 174 88.5
Nitab4.5_0002267g0030 Nicotiana tabacum HOM05D005237 ORTHO05D006189 4.3e-87 324.7 175 88.0
HanXRQChr06g0180531 Helianthus annuus HOM05D005237 ORTHO05D006189 5.7e-87 324.3 172 89.0
Migut.K00410 Erythranthe guttata HOM05D005237 ORTHO05D006189 1.3e-86 323.2 172 89.5
Hma1.2p1_0343F.1_g130850 Hydrangea macrophylla HOM05D005237 ORTHO05D006189 1.3e-86 323.2 173 89.0
Aa31LG2G10030 Aethionema arabicum HOM05D005237 ORTHO05D006189 1.6e-86 322.8 173 88.4
EL10Ac8g18779 Beta vulgaris HOM05D005237 ORTHO05D006189 1.6e-86 322.8 172 89.0
Carub.0002s0491 Capsella rubella HOM05D005237 ORTHO05D006189 1.6e-86 322.8 173 87.9
CARHR052620 Cardamine hirsuta HOM05D005237 ORTHO05D006189 1.6e-86 322.8 173 87.9
AT1G60430 Arabidopsis thaliana HOM05D005237 ORTHO05D006189 2.2e-86 322.4 173 87.3
Sed0006539 Sechium edule HOM05D005237 ORTHO05D006189 2.2e-86 322.4 175 86.9
Thhalv10023668m.g Eutrema salsugineum HOM05D005237 ORTHO05D006189 2.8e-86 322.0 172 88.4
Manes.14G117900 Manihot esculenta HOM05D005237 ORTHO05D006189 2.8e-86 322.0 172 89.0
PGSC0003DMG400030712 Solanum tuberosum HOM05D005237 ORTHO05D006189 3.7e-86 321.6 175 86.3
unitig_748.g7174 Utricularia gibba HOM05D005237 ORTHO05D006189 3.7e-86 321.6 174 87.9
AL2G16270 Arabidopsis lyrata HOM05D005237 ORTHO05D006189 4.8e-86 321.2 173 87.9
RcHm_v2.0_Chr5g0060671 Rosa chinensis HOM05D005237 ORTHO05D006189 4.8e-86 321.2 174 88.5
SalBow1G1295 Salvia bowleyana HOM05D005237 ORTHO05D006189 4.8e-86 321.2 175 88.6
Atru.chr7.1980 Acer truncatum HOM05D005237 ORTHO05D006189 6.3e-86 320.9 174 89.1
Sc18g0000220 Simmondsia chinensis HOM05D005237 ORTHO05D006189 6.3e-86 320.9 172 88.4
Solyc07g007630.3 Solanum lycopersicum HOM05D005237 ORTHO05D006189 6.3e-86 320.9 175 86.3
Sp2g04330 Schrenkiella parvula HOM05D005237 ORTHO05D006189 8.2e-86 320.5 172 87.8
Sopen07g003620 Solanum pennellii HOM05D005237 ORTHO05D006189 8.2e-86 320.5 175 85.7
HPP92_021894 Vanilla planifolia HOM05D005237 ORTHO05D006189 1.4e-85 319.7 173 87.9
Aqoxy7G00028 Aquilegia oxysepala HOM05D005237 ORTHO05D006189 1.8e-85 319.3 175 86.9
THA.LOC104815299 Tarenaya hassleriana HOM05D005237 ORTHO05D006189 5.3e-85 317.8 171 87.1
BcaB07g31213 Brassica carinata HOM05D005237 ORTHO05D006189 6.9e-85 317.4 173 86.1
BcaC04g22225 Brassica carinata HOM05D005237 ORTHO05D006189 6.9e-85 317.4 173 86.1
DCAR_009333 Daucus carota HOM05D005237 ORTHO05D006189 6.9e-85 317.4 171 87.7
CDE07G1573 Ceratophyllum demersum HOM05D005237 ORTHO05D006189 1.2e-84 316.6 174 85.6
Potri.006G063400 Populus trichocarpa HOM05D005237 ORTHO05D006189 1.2e-84 316.6 172 88.4
ECA236G1442 Erigeron canadensis HOM05D005237 ORTHO05D006189 1.5e-84 316.2 172 87.8
Hund09300 Selenicereus undatus HOM05D005237 ORTHO05D006189 1.5e-84 316.2 172 87.2
C09p21860 Brassica napus HOM05D002152 ORTHO05D006189 2.6e-84 315.5 172 86.0
BraA09t37380Z Brassica rapa HOM05D002152 ORTHO05D006189 2.6e-84 315.5 172 86.0
Cc07_g18400 Coffea canephora HOM05D005237 ORTHO05D006189 2.6e-84 315.5 175 88.6
Lsat_1_v5_gn_8_61340 Lactuca sativa HOM05D005237 ORTHO05D006189 2.6e-84 315.5 172 85.5
Ah.09g224420 Amaranthus hybridus HOM05D005237 ORTHO05D006189 4.5e-84 314.7 172 87.2
MSTRG.26338 Avicennia marina HOM05D005237 ORTHO05D006189 5.9e-84 314.3 175 86.3
A09p17560 Brassica napus HOM05D002152 ORTHO05D006189 5.9e-84 314.3 172 85.5
Nitab4.5_0000704g0070 Nicotiana tabacum HOM05D005237 ORTHO05D006189 7.7e-84 313.9 190 81.1
CSS0004544 Camellia sinensis var. sinensis HOM05D005237 ORTHO05D006189 1.7e-83 312.8 226 71.2
SEGI_28631 Sequoiadendron giganteum HOM05D005237 ORTHO05D006189 2.9e-83 312.0 172 86.0
Zm00001eb238940 Zea mays HOM05D005237 ORTHO05D006189 6.5e-83 310.8 173 83.8
Zm00001eb238960 Zea mays HOM05D005237 ORTHO05D006189 6.5e-83 310.8 172 84.3
Zm00001eb238970 Zea mays HOM05D005237 ORTHO05D006189 6.5e-83 310.8 172 84.3
Zm00001eb438640 Zea mays HOM05D005237 ORTHO05D006189 6.5e-83 310.8 172 84.3
Zm00001eb438650 Zea mays HOM05D005237 ORTHO05D006189 6.5e-83 310.8 172 84.3
MBI14_g10734_MAGBIO Magnolia biondii HOM05D005237 ORTHO05D006189 5.5e-82 307.8 181 84.0
Zm00001eb150940 Zea mays HOM05D005237 ORTHO05D006189 9.4e-82 307.0 172 83.7
Gohir.D05G014800 Gossypium hirsutum HOM05D005237 ORTHO05D006189 1.4e-80 303.1 171 83.0
Gohir.A05G013700 Gossypium hirsutum HOM05D005237 ORTHO05D006189 3.0e-80 302.0 171 82.5
Dinv36460 Davidia involucrata HOM05D005237 ORTHO05D006189 1.5e-79 299.7 159 90.6
Gorai.009G014900 Gossypium raimondii HOM05D005237 ORTHO05D006189 4.3e-79 298.1 173 82.1
Gohir.D08G100500 Gossypium hirsutum HOM05D005237 ORTHO05D006189 2.8e-78 295.4 158 91.1
SHI03217 Sapria himalayana HOM05D005237 ORTHO05D006189 8.2e-78 293.9 165 83.6
ATR0580G166 Amborella trichopoda HOM05D005237 ORTHO05D006189 4.4e-71 271.6 149 89.3
SMO356G0108 Selaginella moellendorffii HOM05D005237 ORTHO05D006189 2.8e-70 268.9 174 71.3
Pp3c10_12220 Physcomitrium patens HOM05D005237 ORTHO05D006189 3.1e-69 265.4 174 69.0
CDE04G0420 Ceratophyllum demersum HOM05D005237 ORTHO05D006189 5.3e-69 264.6 151 83.4
Pp3c3_23320 Physcomitrium patens HOM05D005237 ORTHO05D006189 7.0e-69 264.2 174 68.4
Mapoly0002s0013 Marchantia polymorpha HOM05D005237 ORTHO05D006189 9.1e-69 263.8 176 70.5
BolC9t55091H Brassica oleracea HOM05D002152 ORTHO05D002737 1.2e-68 263.5 146 87.0
MELO3C004473.2 Cucumis melo HOM05D005237 ORTHO05D006189 2.9e-67 258.8 138 90.6
PSO675G7544 Papaver somniferum HOM05D005237 ORTHO05D006189 8.0e-65 250.8 147 83.0
TAR626G0602 Trochodendron aralioides HOM05D005237 ORTHO05D006189 1.3e-62 243.4 134 89.6
COL.COLO4_15552 Corchorus olitorius HOM05D005237 ORTHO05D006189 2.2e-62 242.7 130 90.0
VMungo1215G1009 Vigna mungo HOM05D005237 ORTHO05D006189 2.2e-62 242.7 182 68.7
Thecc.09G135400 Theobroma cacao HOM05D005237 ORTHO05D006189 6.3e-62 241.1 172 71.5
TPR.G39824 Trifolium pratense HOM05D005237 ORTHO05D006189 1.8e-61 239.6 127 89.0
TWI38G2392 Tripterygium wilfordii HOM05D005237 ORTHO05D006189 9.1e-61 237.3 128 88.3
Duzib187G1805 Durio zibethinus HOM05D005237 ORTHO05D006189 3.5e-60 235.3 130 87.7
Zm00001eb238980 Zea mays HOM05D005237 ORTHO05D006189 3.5e-60 235.3 133 84.2
AUR62011203 Chenopodium quinoa HOM05D005237 ORTHO05D006189 5.9e-60 234.6 127 89.8
AUR62013284 Chenopodium quinoa HOM05D005237 ORTHO05D006189 5.9e-60 234.6 127 89.8
CAN.G1382.4 Capsicum annuum HOM05D005237 ORTHO05D006189 1.3e-59 233.4 127 86.6
Lsat_1_v5_gn_7_44340 Lactuca sativa HOM05D005237 ORTHO05D006189 6.5e-59 231.1 176 63.1
MD10G1159100 Malus domestica HOM05D005237 ORTHO05D006189 1.9e-58 229.6 130 85.4
Os02g0235000 Oryza sativa ssp. japonica HOM05D005237 ORTHO05D006189 3.2e-58 228.8 129 82.9
FAN25G0883 Fragaria x ananassa HOM05D005237 ORTHO05D006189 3.0e-56 222.2 163 71.8
VMungo0251G3112 Vigna mungo HOM05D005237 ORTHO05D006189 2.0e-52 209.5 147 74.8
Sopen02g003910 Solanum pennellii HOM05D005237 ORTHO05D006189 7.2e-50 201.1 132 73.5
Peaxi162Scf00113g00061 Petunia axillaris HOM05D005237 ORTHO05D006189 6.1e-49 198.0 128 77.3
Solyc02g014540.3 Solanum lycopersicum HOM05D005237 ORTHO05D006189 6.3e-46 188.0 126 71.4
Ca_21648_v3 Cicer arietinum L. HOM05D005237 ORTHO05D006189 7.0e-45 184.5 131 74.0
FAN16G0279 Fragaria x ananassa HOM05D005237 ORTHO05D006189 5.2e-40 168.3 92 89.1
FAN21G3302 Fragaria x ananassa HOM05D005237 ORTHO05D006189 5.7e-39 164.9 91 90.1
Sabra06G0046100 Salix brachista HOM05D005237 ORTHO05D006189 1.4e-37 160.2 93 84.9
FAN28G2985 Fragaria x ananassa HOM05D005237 ORTHO05D006189 2.4e-37 159.5 94 85.1
FAN02G0796 Fragaria x ananassa HOM05D005237 ORTHO05D006189 7.0e-37 157.9 104 76.9
FAN17G0540 Fragaria x ananassa HOM05D005237 ORTHO05D006189 1.6e-36 156.8 101 82.2
FAN17G0595 Fragaria x ananassa HOM05D005237 ORTHO05D006189 1.6e-36 156.8 95 84.2
FAN20G0460 Fragaria x ananassa HOM05D005237 ORTHO05D006189 5.9e-36 154.8 98 78.6
Eucgr.I02126 Eucalyptus grandis HOM05D005237 ORTHO05D006189 7.8e-36 154.5 80 90.0
PGSC0003DMG400003270 Solanum tuberosum HOM05D005237 ORTHO05D006189 3.9e-35 152.1 96 76.0
Medtr0320s0040 Medicago truncatula HOM05D005237 ORTHO05D006189 3.6e-33 145.6 88 79.5
Duzib168G1377 Durio zibethinus HOM05D005237 ORTHO05D006189 3.2e-29 132.5 73 89.0
Eucgr.L01822 Eucalyptus grandis HOM05D005237 ORTHO05D006189 2.0e-28 129.8 80 80.0
Cre09.g397950 Chlamydomonas reinhardtii HOM05D005237 ORTHO05D006189 2.7e-28 129.4 192 36.5
Aa31LG9G5450 Aethionema arabicum HOM05D005237 ORTHO05D006189 7.8e-28 127.9 99 65.7
FAN20G1904 Fragaria x ananassa HOM05D005237 ORTHO05D006189 7.8e-28 127.9 70 90.0
Zm00001eb302220 Zea mays HOM05D005237 ORTHO05D006189 1.9e-26 123.2 67 80.6
TAR625G1190 Trochodendron aralioides HOM05D005237 ORTHO05D006189 1.3e-22 110.5 90 64.4
Cc06_g07800 Coffea canephora HOM05D005237 ORTHO05D006189 2.3e-19 99.8 57 82.5
Lsat_1_v5_gn_2_45981 Lactuca sativa HOM05D005237 ORTHO05D003224 3.5e-12 75.9 37 83.8


User provided reference genes

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