Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_25431 Corylus avellana HOM05D006254 ORTHO05D007409 3.8e-213 744.6 381 100.0
Haze_25432 Corylus avellana HOM05D006254 ORTHO05D007409 1.3e-208 729.6 381 93.2
Cfa002251 Carpinus fangiana HOM05D006254 ORTHO05D007409 8.9e-61 238.4 252 53.2
QL10p038598 Quercus lobata HOM05D006254 ORTHO05D007409 1.4e-53 214.5 252 46.0
CiPaw.04G178100 Carya illinoinensis HOM05D006254 ORTHO05D007409 3.4e-52 209.9 252 46.8
Potri.004G137900 Populus trichocarpa HOM05D006254 ORTHO05D007409 6.0e-49 199.1 252 43.3
Dinv02479 Davidia involucrata HOM05D006254 ORTHO05D007409 7.8e-49 198.7 252 43.7
CSS0012450 Camellia sinensis var. sinensis HOM05D006254 ORTHO05D007409 1.1e-47 194.9 252 42.9
TWI31G0260 Tripterygium wilfordii HOM05D006254 ORTHO05D007409 1.9e-47 194.1 253 42.7
Manes.12G085200 Manihot esculenta HOM05D006254 ORTHO05D007409 7.3e-47 192.2 252 41.7
Lsat_1_v5_gn_1_78401 Lactuca sativa HOM05D006254 ORTHO05D007409 2.1e-46 190.7 252 40.9
vmacro10394 Vaccinium macrocarpon HOM05D006254 ORTHO05D007409 2.1e-46 190.7 252 42.1
Cc07_g20930 Coffea canephora HOM05D006254 ORTHO05D007409 2.8e-46 190.3 253 41.5
Prupe.6G059200 Prunus persica HOM05D006254 ORTHO05D007409 8.1e-46 188.7 252 41.3
TAR628G1014 Trochodendron aralioides HOM05D006254 ORTHO05D007409 8.1e-46 188.7 252 40.9
ECA248G3109 Erigeron canadensis HOM05D006254 ORTHO05D007409 1.8e-45 187.6 252 42.1
HanXRQChr01g0017761 Helianthus annuus HOM05D006254 ORTHO05D007409 2.4e-45 187.2 253 41.5
Gohir.A05G375400 Gossypium hirsutum HOM05D006254 ORTHO05D007409 3.4e-44 183.3 250 39.2
CANSAT54G2690 Cannabis sativa HOM05D006254 ORTHO05D007409 7.6e-44 182.2 252 40.5
GSVIVG01000233001 Vitis vinifera HOM05D003183 ORTHO05D007409 7.6e-44 182.2 251 41.4
Rhsim09G0131600 Rhododendron simsii HOM05D006254 ORTHO05D007409 1.3e-43 181.4 243 40.7
Ciclev10024761m.g Citrus clementina HOM05D003183 ORTHO05D003697 1.7e-43 181.0 142 63.4
Eucgr.I00013 Eucalyptus grandis HOM05D006254 ORTHO05D007409 1.7e-43 181.0 252 40.1
Gorai.012G045500 Gossypium raimondii HOM05D006254 ORTHO05D007409 1.7e-43 181.0 250 38.4
CsaV3_4G030320 Cucumis sativus L. HOM05D006254 ORTHO05D007409 2.9e-43 180.3 252 40.9
MD03G1072300 Malus domestica HOM05D006254 ORTHO05D007409 2.9e-43 180.3 252 39.3
MELO3C033099.2 Cucumis melo HOM05D006254 ORTHO05D007409 1.1e-42 178.3 252 40.5
EL10Ac4g08984 Beta vulgaris HOM05D006254 ORTHO05D007409 1.9e-42 177.6 256 39.1
Hma1.2p1_0057F.1_g032170 Hydrangea macrophylla HOM05D006254 ORTHO05D007409 4.2e-42 176.4 245 38.8
Sed0010974 Sechium edule HOM05D006254 ORTHO05D007409 4.2e-42 176.4 139 61.2
Sabra04G0089300 Salix brachista HOM05D006254 ORTHO05D007409 1.6e-41 174.5 141 57.4
PGR119G0951 Punica granatum HOM05D006254 ORTHO05D007409 1.0e-40 171.8 249 39.0
TPR.G12754 Trifolium pratense HOM05D006254 ORTHO05D007409 1.0e-40 171.8 252 40.1
THA.LOC104803663 Tarenaya hassleriana HOM05D006254 ORTHO05D007409 2.3e-40 170.6 250 38.4
Aqoxy5G02669 Aquilegia oxysepala HOM05D006254 ORTHO05D007409 3.0e-40 170.2 249 38.6
HanXRQChr01g0017751 Helianthus annuus HOM05D006254 ORTHO05D007409 3.0e-40 170.2 249 39.4
Ca_17588_v3 Cicer arietinum L. HOM05D006254 ORTHO05D007409 3.9e-40 169.9 252 39.7
Thecc.01G235200 Theobroma cacao HOM05D006254 ORTHO05D007409 3.9e-40 169.9 150 50.7
Lalb_Chr12g0202731 Lupinus albus HOM05D006254 ORTHO05D007409 5.1e-40 169.5 173 49.7
arahy.Tifrunner.gnm1.ann1.ZNEY68 Arachis hypogaea HOM05D006254 ORTHO05D007409 8.7e-40 168.7 250 38.8
FAN21G3787 Fragaria x ananassa HOM05D006254 ORTHO05D007409 8.7e-40 168.7 260 37.3
FAN11G0663 Fragaria x ananassa HOM05D006254 ORTHO05D007409 1.1e-39 168.3 260 37.7
FAN25G1911 Fragaria x ananassa HOM05D006254 ORTHO05D007409 1.1e-39 168.3 260 37.7
FvH4_3g38370 Fragaria vesca HOM05D006254 ORTHO05D007409 1.5e-39 167.9 260 37.7
DCAR_009615 Daucus carota HOM05D006254 ORTHO05D007409 2.5e-39 167.2 250 36.4
Peaxi162Scf00030g00012 Petunia axillaris HOM05D006254 ORTHO05D007409 3.3e-39 166.8 252 36.9
Psat7g040840 Pisum sativum HOM05D006254 ORTHO05D007409 5.6e-39 166.0 250 39.2
Sc20g0000720 Simmondsia chinensis HOM05D006254 ORTHO05D007409 5.6e-39 166.0 252 37.7
arahy.Tifrunner.gnm1.ann1.9169VS Arachis hypogaea HOM05D006254 ORTHO05D007409 7.3e-39 165.6 201 44.3
SGA_v2.0_scaffold54G19570 Striga asiatica HOM05D006254 ORTHO05D007409 7.3e-39 165.6 252 35.7
FAN16G1494 Fragaria x ananassa HOM05D006254 ORTHO05D007409 9.6e-39 165.2 247 37.7
Oeu011007.1 Olea europaea HOM05D006254 ORTHO05D007409 1.3e-38 164.9 251 37.5
MD11G1078600 Malus domestica HOM05D006254 ORTHO05D007409 2.1e-38 164.1 174 46.6
Sopen03g020950 Solanum pennellii HOM05D006254 ORTHO05D007409 3.6e-38 163.3 253 35.2
Medtr8g095410 Medicago truncatula HOM05D006254 ORTHO05D007409 1.4e-37 161.4 310 34.2
Solyc03g078230.3 Solanum lycopersicum HOM05D006254 ORTHO05D007409 1.8e-37 161.0 253 34.8
Phvul.002G279100 Phaseolus vulgaris HOM05D006254 ORTHO05D007409 4.0e-37 159.8 251 36.7
MSTRG.23507 Avicennia marina HOM05D006254 ORTHO05D007409 5.3e-37 159.5 252 35.3
PSO017G1045 Papaver somniferum HOM05D006254 ORTHO05D007409 5.3e-37 159.5 252 36.1
Migut.H00776 Erythranthe guttata HOM05D006254 ORTHO05D007409 9.0e-37 158.7 252 34.9
RcHm_v2.0_Chr5g0068971 Rosa chinensis HOM05D006254 ORTHO05D007409 9.0e-37 158.7 130 56.2
AUR62036036 Chenopodium quinoa HOM05D006254 ORTHO05D007409 3.4e-36 156.8 244 36.1
Hund06901 Selenicereus undatus HOM05D006254 ORTHO05D007409 5.8e-36 156.0 244 36.5
VMungo0251G0787 Vigna mungo HOM05D006254 ORTHO05D007409 7.6e-36 155.6 174 45.4
Gohir.D04G040400 Gossypium hirsutum HOM05D006254 ORTHO05D007409 2.2e-35 154.1 242 35.1
MD11G1077300 Malus domestica HOM05D006254 ORTHO05D007409 2.9e-35 153.7 138 52.2
Carub.0001s3633 Capsella rubella HOM05D006254 ORTHO05D007409 3.8e-35 153.3 250 33.6
BcaB02g09339 Brassica carinata HOM05D006254 ORTHO05D007409 6.4e-35 152.5 245 33.1
Thhalv10016597m.g Eutrema salsugineum HOM05D006254 ORTHO05D007409 1.4e-34 151.4 247 34.0
Lj4g0026953 Lotus japonicus HOM05D006254 ORTHO05D007409 1.4e-34 151.4 174 44.8
Sp4g18960 Schrenkiella parvula HOM05D006254 ORTHO05D007409 2.4e-34 150.6 247 33.2
BcaB02g09340 Brassica carinata HOM05D006254 ORTHO05D007409 3.2e-34 150.2 245 32.2
BcaC02g11789 Brassica carinata HOM05D006254 ORTHO05D007409 9.3e-34 148.7 246 32.9
C04p11350 Brassica napus HOM05D006254 ORTHO05D007409 9.3e-34 148.7 246 32.9
A05p09180 Brassica napus HOM05D006254 ORTHO05D007409 1.2e-33 148.3 246 32.9
BolC4t22794H Brassica oleracea HOM05D006254 ORTHO05D007409 1.2e-33 148.3 245 32.7
BraA05t19873Z Brassica rapa HOM05D006254 ORTHO05D007409 1.2e-33 148.3 246 32.9
Glyma.05G198100 Glycine max HOM05D006254 ORTHO05D007409 1.6e-33 147.9 140 49.3
AL1G53850 Arabidopsis lyrata HOM05D006254 ORTHO05D007409 2.1e-33 147.5 247 33.6
AT1G47570 Arabidopsis thaliana HOM05D006254 ORTHO05D007409 2.7e-33 147.1 250 33.6
BolC4t22773H Brassica oleracea HOM05D006254 ORTHO05D007409 8.7e-32 142.1 252 32.1
CARHR037200 Cardamine hirsuta HOM05D006254 ORTHO05D007409 8.7e-32 142.1 250 31.2
Os11g0175500 Oryza sativa ssp. japonica HOM05D006254 ORTHO05D007409 1.1e-31 141.7 173 41.0
RcHm_v2.0_Chr2g0157071 Rosa chinensis HOM05D006254 ORTHO05D007409 1.1e-31 141.7 121 54.5
Atru.chr4.972 Acer truncatum HOM05D006254 ORTHO05D007409 5.6e-31 139.4 105 61.0
CDE06G2483 Ceratophyllum demersum HOM05D006254 ORTHO05D007409 5.6e-31 139.4 140 46.4
Zm00001eb200940 Zea mays HOM05D006254 ORTHO05D007409 9.6e-31 138.7 176 40.9
Aa31LG5G9250 Aethionema arabicum HOM05D006254 ORTHO05D007409 6.2e-30 136.0 250 31.6
ATR0584G026 Amborella trichopoda HOM05D006254 ORTHO05D007409 1.4e-29 134.8 140 45.7
Actinidia34771 Actinidia chinensis HOM05D000969 ORTHO05D000899 1.2e-28 131.7 71 74.6
Migut.H00777 Erythranthe guttata HOM05D006254 ORTHO05D007409 5.8e-28 129.4 162 40.1
Nitab4.5_0012738g0010 Nicotiana tabacum HOM05D006254 ORTHO05D007409 9.9e-28 128.6 270 30.7
Cpa.g.sc138.23 Carica papaya HOM05D006254 ORTHO05D007409 9.3e-26 122.1 216 35.2
Ah.04g163200 Amaranthus hybridus HOM05D006254 ORTHO05D007409 3.3e-23 113.6 256 29.3
MD00G1120300 Malus domestica HOM05D006254 ORTHO05D007409 4.8e-22 109.8 252 30.2
GSVIVG01038034001 Vitis vinifera HOM05D001605 ORTHO05D007409 6.2e-22 109.4 58 77.6
Nn1g08418 Nelumbo nucifera HOM05D006254 ORTHO05D007409 1.2e-20 105.1 121 46.3
MD00G1120800 Malus domestica HOM05D006254 ORTHO05D007409 5.1e-16 89.7 206 30.1
unitig_65.g29879 Utricularia gibba HOM05D006254 ORTHO05D007409 8.7e-16 89.0 146 35.6
Actinidia38917 Actinidia chinensis HOM05D006254 ORTHO05D007409 1.5e-15 88.2 51 70.6
MD11G1078400 Malus domestica HOM05D006254 ORTHO05D007409 4.3e-15 86.7 206 29.6
unitig_62.g23450 Utricularia gibba HOM05D006254 ORTHO05D007409 1.3e-14 85.1 245 26.1
MD11G1077500 Malus domestica HOM05D006254 ORTHO05D007409 2.1e-14 84.3 44 79.5
Nitab4.5_0000004g0230 Nicotiana tabacum HOM05D006254 ORTHO05D007409 2.9e-11 73.9 196 27.0
HPP92_016136 Vanilla planifolia HOM05D006254 ORTHO05D007409 4.2e-10 70.1 132 34.8
BolC4t22791H Brassica oleracea HOM05D006254 ORTHO05D007409 1.1e-07 62.0 57 50.9
AagrBONN_evm.TU.Sc2ySwM_117.2849 Anthoceros agrestis HOM05D006254 ORTHO05D007409 5.7e-07 59.7 133 26.3


User provided reference genes

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