Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_25418 Corylus avellana HOM05D005219 ORTHO05D006451 1.1e-78 296.6 148 100.0
Cfa002238 Carpinus fangiana HOM05D005219 ORTHO05D006451 5.7e-48 194.5 98 98.0
CiPaw.04G179100 Carya illinoinensis HOM05D005219 ORTHO05D006451 5.0e-44 181.4 98 90.8
CiPaw.03G253500 Carya illinoinensis HOM05D005219 ORTHO05D006451 1.6e-42 176.4 98 89.8
TAR381G1173 Trochodendron aralioides HOM05D005219 ORTHO05D006451 3.0e-41 172.2 98 83.7
QL10p038974 Quercus lobata HOM05D005219 ORTHO05D006451 2.0e-40 169.5 96 86.5
Atru.chr4.1140 Acer truncatum HOM05D005219 ORTHO05D006451 2.2e-39 166.0 98 80.6
CANSAT54G2070 Cannabis sativa HOM05D005219 ORTHO05D006451 6.3e-39 164.5 98 80.6
ClCG02G000120 Citrullus lanatus HOM05D005219 ORTHO05D006451 1.4e-38 163.3 98 82.7
Hund06895 Selenicereus undatus HOM05D005219 ORTHO05D006451 1.4e-38 163.3 100 76.0
Lalb_Chr13g0296831 Lupinus albus HOM05D005219 ORTHO05D006451 3.1e-38 162.2 98 77.6
CSS0003875 Camellia sinensis var. sinensis HOM05D005219 ORTHO05D006451 4.1e-38 161.8 98 80.6
CSS0004797 Camellia sinensis var. sinensis HOM05D005219 ORTHO05D006451 4.1e-38 161.8 98 80.6
CsaV3_2G019800 Cucumis sativus L. HOM05D005219 ORTHO05D006451 4.1e-38 161.8 98 81.6
PSO170G0098 Papaver somniferum HOM05D005219 ORTHO05D006451 5.4e-38 161.4 98 78.6
arahy.Tifrunner.gnm1.ann1.4364K7 Arachis hypogaea HOM05D005219 ORTHO05D006451 1.2e-37 160.2 98 78.6
arahy.Tifrunner.gnm1.ann1.9Z2GEU Arachis hypogaea HOM05D005219 ORTHO05D006451 1.2e-37 160.2 98 78.6
MD15G1138200 Malus domestica HOM05D005219 ORTHO05D006451 1.2e-37 160.2 98 80.6
PSO782G1219 Papaver somniferum HOM05D005219 ORTHO05D006451 1.2e-37 160.2 98 78.6
PGR142G2743 Punica granatum HOM05D005219 ORTHO05D006451 1.2e-37 160.2 98 78.6
Ciclev10025072m.g Citrus clementina HOM05D005219 ORTHO05D006451 1.6e-37 159.8 98 78.6
Nn1g08341 Nelumbo nucifera HOM05D005219 ORTHO05D006451 1.6e-37 159.8 98 78.6
Ca_17595_v3 Cicer arietinum L. HOM05D005219 ORTHO05D006451 2.0e-37 159.5 98 78.6
EL10Ac4g08973 Beta vulgaris HOM05D005219 ORTHO05D006451 4.5e-37 158.3 98 76.5
AUR62036029 Chenopodium quinoa HOM05D005219 ORTHO05D006451 5.9e-37 157.9 98 75.5
Glyma.06G159700 Glycine max HOM05D005219 ORTHO05D006451 5.9e-37 157.9 98 76.5
Duzib147G1025 Durio zibethinus HOM05D005219 ORTHO05D006451 7.8e-37 157.5 98 78.6
Thecc.01G233500 Theobroma cacao HOM05D005219 ORTHO05D006451 1.0e-36 157.1 98 76.5
Sed0017542 Sechium edule HOM05D005219 ORTHO05D006451 1.3e-36 156.8 98 77.6
AUR62004810 Chenopodium quinoa HOM05D005219 ORTHO05D006451 1.7e-36 156.4 98 74.5
Eucgr.I00008 Eucalyptus grandis HOM05D005219 ORTHO05D006451 1.7e-36 156.4 98 77.6
Gohir.A05G376400 Gossypium hirsutum HOM05D005219 ORTHO05D006451 2.3e-36 156.0 98 75.5
HanXRQChr02g0043081 Helianthus annuus HOM05D005219 ORTHO05D006451 2.3e-36 156.0 104 73.1
Potri.004G138900 Populus trichocarpa HOM05D005219 ORTHO05D006451 2.3e-36 156.0 98 77.6
Prupe.4G281500 Prunus persica HOM05D005219 ORTHO05D006451 2.3e-36 156.0 98 78.6
VMungo1309G1202 Vigna mungo HOM05D005219 ORTHO05D006451 2.3e-36 156.0 101 72.3
Lalb_Chr12g0202821 Lupinus albus HOM05D005219 ORTHO05D006451 2.9e-36 155.6 98 76.5
Solyc05g056530.4 Solanum lycopersicum HOM05D005219 ORTHO05D006451 5.0e-36 154.8 106 70.8
Dinv16800 Davidia involucrata HOM05D005219 ORTHO05D006451 6.6e-36 154.5 98 75.5
Glyma.05G197300 Glycine max HOM05D005219 ORTHO05D006451 6.6e-36 154.5 98 76.5
Gohir.D04G039600 Gossypium hirsutum HOM05D005219 ORTHO05D006451 8.6e-36 154.1 98 74.5
Gorai.012G044600 Gossypium raimondii HOM05D005219 ORTHO05D006451 8.6e-36 154.1 98 74.5
TPR.G12784 Trifolium pratense HOM05D005219 ORTHO05D006451 8.6e-36 154.1 98 75.5
TWI75G0018 Tripterygium wilfordii HOM05D005219 ORTHO05D006451 1.1e-35 153.7 98 76.5
Phvul.002G277800 Phaseolus vulgaris HOM05D005219 ORTHO05D006451 1.5e-35 153.3 98 74.5
RcHm_v2.0_Chr2g0123471 Rosa chinensis HOM05D005219 ORTHO05D006451 1.5e-35 153.3 98 76.5
Sopen05g034930 Solanum pennellii HOM05D005219 ORTHO05D006451 1.5e-35 153.3 98 75.5
FvH4_1g25450 Fragaria vesca HOM05D005219 ORTHO05D006451 1.9e-35 152.9 98 75.5
FAN19G1780 Fragaria x ananassa HOM05D005219 ORTHO05D006451 1.9e-35 152.9 98 75.5
FAN23G1877 Fragaria x ananassa HOM05D005219 ORTHO05D006451 1.9e-35 152.9 98 75.5
FAN26G1898 Fragaria x ananassa HOM05D005219 ORTHO05D006451 1.9e-35 152.9 98 75.5
FAN28G0381 Fragaria x ananassa HOM05D005219 ORTHO05D006451 1.9e-35 152.9 98 75.5
Medtr8g095210 Medicago truncatula HOM05D005219 ORTHO05D006451 1.9e-35 152.9 98 74.5
Peaxi162Scf00525g00059 Petunia axillaris HOM05D005219 ORTHO05D006451 2.5e-35 152.5 98 75.5
Potri.019G008541 Populus trichocarpa HOM05D005219 ORTHO05D006451 2.5e-35 152.5 98 75.5
Ah.06g191770 Amaranthus hybridus HOM05D005219 ORTHO05D006451 4.3e-35 151.8 98 71.4
Aqoxy6G00109 Aquilegia oxysepala HOM05D005219 ORTHO05D006451 4.3e-35 151.8 98 72.4
CAN.G1156.53 Capsicum annuum HOM05D005219 ORTHO05D006451 4.3e-35 151.8 98 75.5
Oeu011013.3 Olea europaea HOM05D005219 ORTHO05D006451 4.3e-35 151.8 98 73.5
Cpa.g.sc37.82 Carica papaya HOM05D005219 ORTHO05D006451 5.6e-35 151.4 98 74.5
Os04g0439400 Oryza sativa ssp. japonica HOM05D005219 ORTHO05D006451 7.3e-35 151.0 95 73.7
Hund22177 Selenicereus undatus HOM05D005219 ORTHO05D006451 7.3e-35 151.0 98 76.5
PGSC0003DMG400023442 Solanum tuberosum HOM05D005219 ORTHO05D006451 7.3e-35 151.0 98 74.5
Phvul.009G157400 Phaseolus vulgaris HOM05D005219 ORTHO05D006451 1.2e-34 150.2 98 73.5
ECA233G5772 Erigeron canadensis HOM05D005219 ORTHO05D006451 1.6e-34 149.8 103 69.9
HPP92_011421 Vanilla planifolia HOM05D005219 ORTHO05D006451 1.6e-34 149.8 98 73.5
Nitab4.5_0000496g0030 Nicotiana tabacum HOM05D005219 ORTHO05D006451 2.1e-34 149.4 98 72.4
Nitab4.5_0002704g0040 Nicotiana tabacum HOM05D005219 ORTHO05D006451 2.1e-34 149.4 98 72.4
Oeu037875.1 Olea europaea HOM05D005219 ORTHO05D006451 2.8e-34 149.1 98 71.4
Sabra19G0006900 Salix brachista HOM05D005219 ORTHO05D006451 2.8e-34 149.1 98 74.5
Actinidia19951 Actinidia chinensis HOM05D005219 ORTHO05D006451 3.6e-34 148.7 98 73.5
Sc09g0004330 Simmondsia chinensis HOM05D005219 ORTHO05D006451 3.6e-34 148.7 98 72.4
Lsat_1_v5_gn_5_69540 Lactuca sativa HOM05D005219 ORTHO05D006451 4.7e-34 148.3 98 73.5
CDE06G1179 Ceratophyllum demersum HOM05D005219 ORTHO05D006451 6.1e-34 147.9 98 70.4
Actinidia36586 Actinidia chinensis HOM05D005219 ORTHO05D004865 8.0e-34 147.5 98 73.5
A10p28110 Brassica napus HOM05D005219 ORTHO05D006451 8.0e-34 147.5 98 73.5
CDE08G1591 Ceratophyllum demersum HOM05D005219 ORTHO05D006451 1.4e-33 146.7 98 70.4
Glyma.08G004700 Glycine max HOM05D005219 ORTHO05D006451 1.4e-33 146.7 98 71.4
Lj4C816G5 Lonicera japonica HOM05D005219 ORTHO05D006451 2.3e-33 146.0 98 73.5
BcaB08g37236 Brassica carinata HOM05D005219 ORTHO05D006451 3.0e-33 145.6 98 72.4
Mapoly0096s0060 Marchantia polymorpha HOM05D005219 ORTHO05D006451 4.0e-33 145.2 98 69.4
Rhsim10G0123800 Rhododendron simsii HOM05D005219 ORTHO05D006451 5.2e-33 144.8 98 71.4
BraA10t44860Z Brassica rapa HOM05D005219 ORTHO05D006451 6.8e-33 144.4 98 72.4
Aa31LG3G17910 Aethionema arabicum HOM05D005219 ORTHO05D006451 8.9e-33 144.1 99 70.7
Os02g0556900 Oryza sativa ssp. japonica HOM05D005219 ORTHO05D006451 1.2e-32 143.7 98 67.3
SEGI_19215 Sequoiadendron giganteum HOM05D005219 ORTHO05D006451 1.2e-32 143.7 98 69.4
THA.LOC104818408 Tarenaya hassleriana HOM05D005219 ORTHO05D006451 1.2e-32 143.7 96 72.9
AagrBONN_evm.TU.Sc2ySwM_344.1599 Anthoceros agrestis HOM05D005219 ORTHO05D006451 2.0e-32 142.9 98 67.3
C09p68310 Brassica napus HOM05D005219 ORTHO05D006451 2.0e-32 142.9 98 71.4
BolC9t59579H Brassica oleracea HOM05D005219 ORTHO05D006451 2.0e-32 142.9 98 71.4
Thhalv10012814m.g Eutrema salsugineum HOM05D005219 ORTHO05D006451 4.4e-32 141.7 98 72.4
SHI11418 Sapria himalayana HOM05D005219 ORTHO05D006451 1.7e-31 139.8 98 67.3
AL6G19360 Arabidopsis lyrata HOM05D005219 ORTHO05D006451 2.9e-31 139.0 98 70.4
A03p04030 Brassica napus HOM05D005219 ORTHO05D006451 2.9e-31 139.0 102 67.6
BcaB01g05651 Brassica carinata HOM05D005219 ORTHO05D006451 3.7e-31 138.7 98 70.4
Pp3c2_17910 Physcomitrium patens HOM05D005219 ORTHO05D006451 3.7e-31 138.7 98 68.4
Sp6g34240 Schrenkiella parvula HOM05D005219 ORTHO05D006451 3.7e-31 138.7 98 71.4
Cc00_g05550 Coffea canephora HOM05D005219 ORTHO05D006451 4.9e-31 138.3 98 68.4
Lj4g0026114 Lotus japonicus HOM05D005219 ORTHO05D006451 4.9e-31 138.3 98 68.4
GSVIVG01022419001 Vitis vinifera HOM05D005219 ORTHO05D006451 6.4e-31 137.9 98 66.3
DCAR_019997 Daucus carota HOM05D005219 ORTHO05D006451 8.3e-31 137.5 98 67.3
AT5G08630 Arabidopsis thaliana HOM05D005219 ORTHO05D006451 1.1e-30 137.1 98 69.4
Carub.0006s0762 Capsella rubella HOM05D005219 ORTHO05D006451 1.1e-30 137.1 98 69.4
DCAR_009584 Daucus carota HOM05D005219 ORTHO05D006451 1.1e-30 137.1 98 68.4
MSTRG.23501 Avicennia marina HOM05D005219 ORTHO05D006451 2.4e-30 136.0 98 64.3
C03p04490 Brassica napus HOM05D005219 ORTHO05D006451 2.4e-30 136.0 98 69.4
BraA03t09746Z Brassica rapa HOM05D005219 ORTHO05D006451 2.4e-30 136.0 98 68.4
Pp3c1_29080 Physcomitrium patens HOM05D005219 ORTHO05D006451 2.4e-30 136.0 98 65.3
Pp3c1_29082 Physcomitrium patens HOM05D005219 ORTHO05D006451 2.4e-30 136.0 98 65.3
Zm00001eb182070 Zea mays HOM05D005219 ORTHO05D006451 4.1e-30 135.2 98 65.3
CARHR204350 Cardamine hirsuta HOM05D005219 ORTHO05D006451 9.2e-30 134.0 98 67.3
SMO144G0202 Selaginella moellendorffii HOM05D005219 ORTHO05D006451 1.7e-28 129.8 96 63.5
Migut.H00795 Erythranthe guttata HOM05D005219 ORTHO05D006451 3.0e-28 129.0 98 62.2
SMO169G0082 Selaginella moellendorffii HOM05D005219 ORTHO05D006451 5.0e-28 128.3 98 61.2
SGA_v2.0_scaffold211G42145 Striga asiatica HOM05D005219 ORTHO05D006451 1.5e-27 126.7 98 60.2
SGA_v2.0_scaffold54G19585 Striga asiatica HOM05D005219 ORTHO05D006451 4.3e-27 125.2 98 58.2
unitig_899.g14489 Utricularia gibba HOM05D005219 ORTHO05D006451 5.6e-27 124.8 98 61.2
vmacro12733 Vaccinium macrocarpon HOM05D005219 ORTHO05D006451 2.8e-26 122.5 138 50.0
Glyma.07G026800 Glycine max HOM05D005219 ORTHO05D021551 3.1e-17 92.4 74 58.1
ATR0737G007 Amborella trichopoda HOM05D005219 ORTHO05D006451 1.3e-15 87.0 59 64.4
ATR1136G012 Amborella trichopoda HOM05D005219 ORTHO05D006451 1.7e-15 86.7 59 69.5
Psat7g208160 Pisum sativum HOM05D005219 ORTHO05D006451 2.6e-08 62.8 45 66.7
MBI07_g10939_MAGBIO Magnolia biondii HOM05D005219 ORTHO05D006451 2.2e-07 59.7 37 73.0


User provided reference genes

Program Settings