Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_25388 Corylus avellana HOM05D000189 ORTHO05D007859 2.0e-73 278.9 129 100.0
CiPaw.04G179600 Carya illinoinensis HOM05D000189 ORTHO05D007859 1.3e-43 179.9 124 70.2
QL10p039723 Quercus lobata HOM05D000189 ORTHO05D007859 4.1e-42 174.9 125 71.2
Sc09g0002050 Simmondsia chinensis HOM05D000189 ORTHO05D007859 5.0e-32 141.4 109 64.2
Phvul.009G151700 Phaseolus vulgaris HOM05D000189 ORTHO05D007859 3.2e-31 138.7 97 68.0
TAR628G1698 Trochodendron aralioides HOM05D000189 ORTHO05D007859 5.5e-31 137.9 122 59.0
Actinidia06600 Actinidia chinensis HOM05D000189 ORTHO05D007859 6.1e-30 134.4 102 63.7
CSS0023610 Camellia sinensis var. sinensis HOM05D000189 ORTHO05D007859 8.0e-30 134.0 104 62.5
Dinv06652 Davidia involucrata HOM05D000189 ORTHO05D007859 1.8e-29 132.9 100 64.0
Nn5g28246 Nelumbo nucifera HOM05D000189 ORTHO05D007859 1.8e-29 132.9 97 67.0
Psat5g058320 Pisum sativum HOM05D000189 ORTHO05D007859 1.2e-28 130.2 92 66.3
EL10Ac4g09653 Beta vulgaris HOM05D000189 ORTHO05D007859 1.5e-28 129.8 97 61.9
Glyma.04G206900 Glycine max HOM05D000189 ORTHO05D007859 1.5e-28 129.8 106 60.4
Atru.chr4.1118 Acer truncatum HOM05D000189 ORTHO05D007859 2.0e-28 129.4 121 52.1
VMungo1309G2054 Vigna mungo HOM05D014460 ORTHO05D007859 2.6e-28 129.0 123 52.8
Ah.02g117830 Amaranthus hybridus HOM05D000189 ORTHO05D007859 3.4e-28 128.6 97 61.9
TWI79G0061 Tripterygium wilfordii HOM05D000189 ORTHO05D007859 3.4e-28 128.6 142 48.6
Rhsim10G0130500 Rhododendron simsii HOM05D000189 ORTHO05D007859 5.7e-28 127.9 112 56.2
FvH4_1g25640 Fragaria vesca HOM05D000189 ORTHO05D007859 7.5e-28 127.5 109 62.4
FAN19G0214 Fragaria x ananassa HOM05D000189 ORTHO05D007859 7.5e-28 127.5 109 62.4
Medtr3g097060 Medicago truncatula HOM05D000189 ORTHO05D007859 7.5e-28 127.5 114 57.9
Carub.0006s0768 Capsella rubella HOM05D000189 ORTHO05D007859 1.3e-27 126.7 97 63.9
AL6G19440 Arabidopsis lyrata HOM05D000189 ORTHO05D007859 1.7e-27 126.3 97 64.9
BcaB05g21570 Brassica carinata HOM05D000189 ORTHO05D007859 2.2e-27 125.9 97 62.9
Cc00_g14750 Coffea canephora HOM05D000189 ORTHO05D007859 2.2e-27 125.9 113 57.5
FAN28G0421 Fragaria x ananassa HOM05D000189 ORTHO05D007859 3.7e-27 125.2 108 62.0
arahy.Tifrunner.gnm1.ann1.50NT7J Arachis hypogaea HOM05D000189 ORTHO05D007859 4.9e-27 124.8 96 59.4
arahy.Tifrunner.gnm1.ann1.682KPN Arachis hypogaea HOM05D000189 ORTHO05D007859 4.9e-27 124.8 96 59.4
AUR62006916 Chenopodium quinoa HOM05D000189 ORTHO05D007859 4.9e-27 124.8 97 60.8
RcHm_v2.0_Chr2g0123961 Rosa chinensis HOM05D000189 ORTHO05D007859 4.9e-27 124.8 102 61.8
Sp6g34160 Schrenkiella parvula HOM05D000189 ORTHO05D007859 4.9e-27 124.8 92 65.2
TPR.G7871 Trifolium pratense HOM05D000189 ORTHO05D007859 4.9e-27 124.8 91 63.7
AT5G08710 Arabidopsis thaliana HOM05D000189 ORTHO05D007859 6.3e-27 124.4 97 62.9
ClCG04G001170 Citrullus lanatus HOM05D000189 ORTHO05D007859 6.3e-27 124.4 102 60.8
Thhalv10013591m.g Eutrema salsugineum HOM05D000189 ORTHO05D007859 6.3e-27 124.4 97 62.9
AUR62000563 Chenopodium quinoa HOM05D000189 ORTHO05D007859 1.1e-26 123.6 97 59.8
Ca_17006_v3 Cicer arietinum L. HOM05D000189 ORTHO05D007859 1.4e-26 123.2 90 64.4
GSVIVG01022385001 Vitis vinifera HOM05D000189 ORTHO05D007859 1.4e-26 123.2 100 61.0
Aqoxy5G02356 Aquilegia oxysepala HOM05D000189 ORTHO05D007859 2.4e-26 122.5 102 58.8
Lsat_1_v5_gn_1_80940 Lactuca sativa HOM05D000189 ORTHO05D007859 3.1e-26 122.1 94 60.6
DCAR_019974 Daucus carota HOM05D000189 ORTHO05D007859 4.1e-26 121.7 93 62.4
Hma1.2p1_0073F.1_g038450 Hydrangea macrophylla HOM05D000189 ORTHO05D007859 4.1e-26 121.7 91 64.8
FAN26G1447 Fragaria x ananassa HOM05D000189 ORTHO05D007859 5.4e-26 121.3 109 59.6
Eucgr.I00040 Eucalyptus grandis HOM05D000189 ORTHO05D007859 7.0e-26 120.9 128 50.8
Sabra05G0058100 Salix brachista HOM05D000189 ORTHO05D007859 7.0e-26 120.9 109 56.9
Thecc.01G143200 Theobroma cacao HOM05D000189 ORTHO05D007859 9.2e-26 120.6 102 60.8
Lalb_Chr08g0237931 Lupinus albus HOM05D000189 ORTHO05D007859 1.2e-25 120.2 99 58.6
THA.LOC104800276 Tarenaya hassleriana HOM05D000189 ORTHO05D007859 1.2e-25 120.2 97 59.8
CARHR204300 Cardamine hirsuta HOM05D000189 ORTHO05D007859 2.0e-25 119.4 97 61.9
BcaC03g13240 Brassica carinata HOM05D000189 ORTHO05D007859 2.7e-25 119.0 96 63.5
COL.COLO4_12122 Corchorus olitorius HOM05D000189 ORTHO05D007859 2.7e-25 119.0 102 61.8
Prupe.4G282400 Prunus persica HOM05D000189 ORTHO05D007859 2.7e-25 119.0 119 55.5
C02p03720 Brassica napus HOM05D000189 ORTHO05D007859 3.5e-25 118.6 101 60.4
BolC2t06332H Brassica oleracea HOM05D000189 ORTHO05D007859 3.5e-25 118.6 101 60.4
Manes.17G018825 Manihot esculenta HOM05D000189 ORTHO05D007859 4.5e-25 118.2 121 51.2
Sed0009877 Sechium edule HOM05D000189 ORTHO05D007859 5.9e-25 117.9 102 57.8
Potri.005G071000 Populus trichocarpa HOM05D000189 ORTHO05D007859 7.8e-25 117.5 102 59.8
BraA02t04966Z Brassica rapa HOM05D000189 ORTHO05D007859 1.0e-24 117.1 92 62.0
SalBow7G4190 Salvia bowleyana HOM05D000189 ORTHO05D007859 2.3e-24 115.9 118 53.4
PSO210G6791 Papaver somniferum HOM05D000189 ORTHO05D007859 2.9e-24 115.5 102 55.9
Lj1g0005687 Lotus japonicus HOM05D000189 ORTHO05D007859 3.8e-24 115.2 94 58.5
MBI03_g11131_MAGBIO Magnolia biondii HOM05D000189 ORTHO05D007859 6.6e-24 114.4 99 58.6
Gohir.A11G224808 Gossypium hirsutum HOM05D000189 ORTHO05D007859 1.1e-23 113.6 110 56.4
Gorai.003G068400 Gossypium raimondii HOM05D000189 ORTHO05D007859 1.1e-23 113.6 110 56.4
Peaxi162Scf00925g00013 Petunia axillaris HOM05D000189 ORTHO05D007859 1.5e-23 113.2 102 58.8
MD00G1127500 Malus domestica HOM05D000189 ORTHO05D007859 1.9e-23 112.8 98 60.2
ECA248G3490 Erigeron canadensis HOM05D000552 ORTHO05D007859 4.3e-23 111.7 88 60.2
Gohir.D11G229200 Gossypium hirsutum HOM05D000189 ORTHO05D007859 9.5e-23 110.5 110 55.5
Migut.L00584 Erythranthe guttata HOM05D000189 ORTHO05D007859 1.2e-22 110.2 115 50.4
Migut.L00266 Erythranthe guttata HOM05D000189 ORTHO05D007859 1.6e-22 109.8 109 52.3
unitig_60.g25691 Utricularia gibba HOM05D000189 ORTHO05D007859 1.0e-21 107.1 92 59.8
HanXRQChr01g0019121 Helianthus annuus HOM05D000189 ORTHO05D007859 3.0e-21 105.5 90 54.4
Aa31LG3G17850 Aethionema arabicum HOM05D000189 ORTHO05D007859 4.0e-21 105.1 178 36.5
ATR0709G034 Amborella trichopoda HOM05D000189 ORTHO05D007859 5.2e-21 104.8 91 57.1
CAN.G1464.5 Capsicum annuum HOM05D000189 ORTHO05D007859 2.0e-20 102.8 89 58.4
Sopen05g034990 Solanum pennellii HOM05D000189 ORTHO05D007859 3.4e-20 102.1 89 55.1
Zm00001eb197640 Zea mays HOM05D000189 ORTHO05D007859 1.7e-19 99.8 113 46.9
Cpa.g.sc37.52 Carica papaya HOM05D000189 ORTHO05D007859 8.3e-19 97.4 70 68.6
BraA05t20873Z Brassica rapa HOM05D000189 ORTHO05D007859 1.1e-18 97.1 78 60.3
SGA_v2.0_scaffold244G44343 Striga asiatica HOM05D000189 ORTHO05D007859 3.2e-18 95.5 82 59.8
Os11g0545800 Oryza sativa ssp. japonica HOM05D000189 ORTHO05D007859 7.0e-18 94.4 112 45.5
A05p19680 Brassica napus HOM05D000189 ORTHO05D007859 9.2e-18 94.0 78 59.0
PGR119G1265 Punica granatum HOM05D000189 ORTHO05D007859 1.6e-17 93.2 103 49.5
SEGI_34887 Sequoiadendron giganteum HOM05D000189 ORTHO05D007859 1.7e-16 89.7 83 56.6
AagrBONN_evm.TU.Sc2ySwM_344.533 Anthoceros agrestis HOM05D000189 ORTHO05D007859 6.6e-16 87.8 101 47.5
Hma1.2p1_0073F.1_g038460 Hydrangea macrophylla HOM05D000189 ORTHO05D007859 1.1e-15 87.0 50 78.0
Pp3c14_25730 Physcomitrium patens HOM05D000189 ORTHO05D007859 9.5e-15 84.0 90 46.7
SMO144G0111 Selaginella moellendorffii HOM05D000189 ORTHO05D007859 1.6e-14 83.2 107 42.1
Oeu042314.1 Olea europaea HOM05D000189 ORTHO05D007859 1.1e-13 80.5 53 67.9
ECA248G1047 Erigeron canadensis HOM05D000003 ORTHO05D000004 6.8e-13 77.8 71 54.9
Migut.L00875 Erythranthe guttata HOM05D000189 ORTHO05D007859 6.8e-13 77.8 102 45.1
Mapoly0001s0080 Marchantia polymorpha HOM05D000189 ORTHO05D007859 2.6e-12 75.9 85 45.9
Cre01.g025900 Chlamydomonas reinhardtii HOM05D000189 ORTHO05D007859 1.3e-08 63.5 82 45.1
A03p46560 Brassica napus HOM05D000189 ORTHO05D008543 1.6e-06 56.6 77 39.0
BraA03t13780Z Brassica rapa HOM05D000189 ORTHO05D008543 1.6e-06 56.6 77 39.0
PSO063G6822 Papaver somniferum HOM05D000189 ORTHO05D000474 2.1e-06 56.2 85 40.0
PSO832G3081 Papaver somniferum HOM05D000189 ORTHO05D000474 2.1e-06 56.2 85 40.0
Carub.0008s2157 Capsella rubella HOM05D000189 ORTHO05D008543 3.6e-06 55.5 83 36.1
AL8G37490 Arabidopsis lyrata HOM05D000189 ORTHO05D008543 6.2e-06 54.7 83 36.1
BraA07t31252Z Brassica rapa HOM05D000189 ORTHO05D000474 6.2e-06 54.7 94 35.1
BcaC06g33201 Brassica carinata HOM05D000189 ORTHO05D008543 8.1e-06 54.3 77 36.4
BcaC08g46492 Brassica carinata HOM05D000189 ORTHO05D000474 8.1e-06 54.3 94 35.1
C06p44360 Brassica napus HOM05D000189 ORTHO05D000474 8.1e-06 54.3 94 35.1
BolC6t39505H Brassica oleracea HOM05D000189 ORTHO05D000474 8.1e-06 54.3 94 35.1
Thhalv10004213m.g Eutrema salsugineum HOM05D000189 ORTHO05D008543 8.1e-06 54.3 77 37.7
Mapoly0011s0008 Marchantia polymorpha HOM05D000189 ORTHO05D012441 8.1e-06 54.3 83 34.9


User provided reference genes

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