Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_25332 Corylus avellana HOM05D003594 ORTHO05D004268 5.2e-56 220.7 104 100.0
Haze_02499 Corylus avellana HOM05D003594 ORTHO05D004268 1.2e-47 193.0 99 94.9
Cfa011279 Carpinus fangiana HOM05D003594 ORTHO05D004268 1.3e-38 162.9 81 96.3
CiPaw.13G039500 Carya illinoinensis HOM05D003594 ORTHO05D004268 1.5e-34 149.4 90 80.0
QL04p046058 Quercus lobata HOM05D003594 ORTHO05D004268 2.6e-31 138.7 90 77.8
Nn3g17199 Nelumbo nucifera HOM05D003594 ORTHO05D004268 4.3e-26 121.3 90 63.3
TAR622G0410 Trochodendron aralioides HOM05D003594 ORTHO05D004268 7.4e-26 120.6 90 62.2
Aqoxy3G00687_Aqoxy3G00688 Aquilegia oxysepala HOM05D003594 ORTHO05D004268 1.3e-25 119.8 84 63.1
CSS0031708 Camellia sinensis var. sinensis HOM05D003594 ORTHO05D004268 1.8e-24 115.9 90 58.9
CANSAT56G3624 Cannabis sativa HOM05D003594 ORTHO05D004268 1.8e-24 115.9 90 63.3
GSVIVG01032568001 Vitis vinifera HOM05D003594 ORTHO05D004268 4.1e-24 114.8 90 64.4
Dinv11846 Davidia involucrata HOM05D003594 ORTHO05D004268 6.9e-24 114.0 90 62.2
Lj3C928G2 Lonicera japonica HOM05D003594 ORTHO05D004268 6.9e-24 114.0 90 60.0
CSS0019720 Camellia sinensis var. sinensis HOM05D003594 ORTHO05D004268 9.0e-24 113.6 90 57.8
Nn4g23115 Nelumbo nucifera HOM05D003594 ORTHO05D004268 9.0e-24 113.6 90 57.8
Actinidia18596 Actinidia chinensis HOM05D003594 ORTHO05D004268 7.6e-23 110.5 91 56.0
Rhsim03G0098900 Rhododendron simsii HOM05D003594 ORTHO05D004268 7.6e-23 110.5 91 57.1
Actinidia06697 Actinidia chinensis HOM05D003594 ORTHO05D004268 2.2e-22 109.0 90 56.7
PSO017G2985 Papaver somniferum HOM05D003594 ORTHO05D004268 2.9e-22 108.6 103 52.4
PSO478G3548 Papaver somniferum HOM05D003594 ORTHO05D004268 3.8e-22 108.2 103 51.5
PGR044G2128 Punica granatum HOM05D003594 ORTHO05D004268 6.5e-22 107.5 89 57.3
ClCG09G007450 Citrullus lanatus HOM05D003594 ORTHO05D004268 1.4e-21 106.3 90 62.2
Hma1.2p1_2419F.1_g321820 Hydrangea macrophylla HOM05D003594 ORTHO05D004268 1.9e-21 105.9 91 56.0
Lalb_Chr10g0100231 Lupinus albus HOM05D003594 ORTHO05D004268 1.9e-21 105.9 89 57.3
Sed0011677 Sechium edule HOM05D003594 ORTHO05D004268 1.9e-21 105.9 90 60.0
TWI38G1480 Tripterygium wilfordii HOM05D003594 ORTHO05D004268 2.5e-21 105.5 89 56.2
CsaV3_5G035420 Cucumis sativus L. HOM05D003594 ORTHO05D004268 3.2e-21 105.1 90 61.1
MELO3C012354.2 Cucumis melo HOM05D003594 ORTHO05D004268 4.2e-21 104.8 90 60.0
Glyma.07G058700 Glycine max HOM05D003594 ORTHO05D004268 4.2e-21 104.8 90 57.8
Lsat_1_v5_gn_2_104580 Lactuca sativa HOM05D003594 ORTHO05D004268 7.2e-21 104.0 90 57.8
Prupe.3G003400 Prunus persica HOM05D003594 ORTHO05D004268 7.2e-21 104.0 90 57.8
Sc06g0002330 Simmondsia chinensis HOM05D003594 ORTHO05D004268 7.2e-21 104.0 100 54.0
ClCG05G018390 Citrullus lanatus HOM05D003594 ORTHO05D004268 1.2e-20 103.2 90 60.0
TWI63G1716 Tripterygium wilfordii HOM05D003594 ORTHO05D004268 1.2e-20 103.2 89 55.1
Medtr3g075460 Medicago truncatula HOM05D003594 ORTHO05D004268 1.6e-20 102.8 87 60.9
Glyma.16G027600 Glycine max HOM05D003594 ORTHO05D004268 2.1e-20 102.4 90 57.8
MBI02_g14487_MAGBIO Magnolia biondii HOM05D003594 ORTHO05D004268 2.1e-20 102.4 91 57.1
Ah.04g162260 Amaranthus hybridus HOM05D003594 ORTHO05D004268 3.5e-20 101.7 90 53.3
VMungo0331G0994 Vigna mungo HOM05D003594 ORTHO05D004268 7.9e-20 100.5 90 53.3
Psat4g159240 Pisum sativum HOM05D003594 ORTHO05D004268 1.0e-19 100.1 87 58.6
HanXRQChr11g0342181 Helianthus annuus HOM05D003594 ORTHO05D004268 1.3e-19 99.8 90 53.3
Medtr8g028030 Medicago truncatula HOM05D003594 ORTHO05D004268 3.9e-19 98.2 87 56.3
TPR.G8757 Trifolium pratense HOM05D003594 ORTHO05D004268 5.1e-19 97.8 89 56.2
Phvul.010G110700 Phaseolus vulgaris HOM05D003594 ORTHO05D004268 6.7e-19 97.4 90 52.2
RcHm_v2.0_Chr7g0211051 Rosa chinensis HOM05D003594 ORTHO05D004268 6.7e-19 97.4 89 55.1
THA.LOC104820658 Tarenaya hassleriana HOM05D003594 ORTHO05D004268 6.7e-19 97.4 90 54.4
Ca_23589_v3 Cicer arietinum L. HOM05D003594 ORTHO05D004268 8.7e-19 97.1 87 58.6
FAN04G1757 Fragaria x ananassa HOM05D003594 ORTHO05D004268 1.5e-18 96.3 89 52.8
FAN08G1578 Fragaria x ananassa HOM05D003594 ORTHO05D004268 1.5e-18 96.3 89 52.8
Solyc11g007010.2 Solanum lycopersicum HOM05D003594 ORTHO05D004268 1.9e-18 95.9 87 58.6
Sopen11g002930 Solanum pennellii HOM05D003594 ORTHO05D004268 1.9e-18 95.9 87 58.6
Nitab4.5_0005622g0060 Nicotiana tabacum HOM05D003594 ORTHO05D004268 3.3e-18 95.1 87 57.5
Cc02_g29780 Coffea canephora HOM05D003594 ORTHO05D004268 4.3e-18 94.7 90 53.3
Nitab4.5_0001437g0090 Nicotiana tabacum HOM05D003594 ORTHO05D004268 4.3e-18 94.7 87 58.6
PGSC0003DMG400023977 Solanum tuberosum HOM05D003594 ORTHO05D004268 5.7e-18 94.4 92 54.3
FvH4_5g22640 Fragaria vesca HOM05D003594 ORTHO05D004268 9.7e-18 93.6 89 51.7
FAN18G3192 Fragaria x ananassa HOM05D003594 ORTHO05D004268 9.7e-18 93.6 89 51.7
FAN18G4146 Fragaria x ananassa HOM05D003594 ORTHO05D004268 9.7e-18 93.6 89 51.7
CAN.G645.4 Capsicum annuum HOM05D003594 ORTHO05D004268 1.6e-17 92.8 97 53.6
Sed0007749 Sechium edule HOM05D003594 ORTHO05D004268 2.2e-17 92.4 90 54.4
Ciclev10027803m.g Citrus clementina HOM05D003594 ORTHO05D004268 6.3e-17 90.9 86 52.3
ECA238G3867 Erigeron canadensis HOM05D003594 ORTHO05D004268 6.3e-17 90.9 91 52.7
Lj3g0004598 Lotus japonicus HOM05D003594 ORTHO05D004268 1.1e-16 90.1 86 54.7
SalBow6G4638 Salvia bowleyana HOM05D003594 ORTHO05D004268 1.4e-16 89.7 81 54.3
Manes.11G108901 Manihot esculenta HOM05D003594 ORTHO05D004268 2.4e-16 89.0 87 54.0
MD17G1284000 Malus domestica HOM05D003594 ORTHO05D004268 3.1e-16 88.6 81 59.3
MSTRG.11586 Avicennia marina HOM05D003594 ORTHO05D004268 4.1e-16 88.2 81 55.6
MSTRG.27538 Avicennia marina HOM05D003594 ORTHO05D004268 4.1e-16 88.2 81 55.6
A08p24610 Brassica napus HOM05D003594 ORTHO05D004268 4.1e-16 88.2 92 54.3
BraA08t34416Z Brassica rapa HOM05D003594 ORTHO05D004268 4.1e-16 88.2 92 54.3
DCAR_006339 Daucus carota HOM05D003594 ORTHO05D004268 4.1e-16 88.2 81 54.3
ATR0737G134 Amborella trichopoda HOM05D003594 ORTHO05D004268 5.3e-16 87.8 90 48.9
Cc02_g29810 Coffea canephora HOM05D003594 ORTHO05D004268 5.3e-16 87.8 83 54.2
MD09G1289200 Malus domestica HOM05D003594 ORTHO05D004268 5.3e-16 87.8 81 59.3
SGA_v2.0_scaffold295G47526 Striga asiatica HOM05D003594 ORTHO05D004268 5.3e-16 87.8 90 50.0
Thecc.10G111800 Theobroma cacao HOM05D003594 ORTHO05D004268 5.3e-16 87.8 93 50.5
Peaxi162Scf00173g00417 Petunia axillaris HOM05D003594 ORTHO05D004268 9.0e-16 87.0 86 54.7
AUR62042073 Chenopodium quinoa HOM05D003594 ORTHO05D004268 1.5e-15 86.3 80 48.8
Migut.F00912 Erythranthe guttata HOM05D003594 ORTHO05D004268 1.5e-15 86.3 81 51.9
EL10Ac4g08659 Beta vulgaris HOM05D003594 ORTHO05D004268 2.0e-15 85.9 90 51.1
BcaC01g00173 Brassica carinata HOM05D003594 ORTHO05D004268 2.0e-15 85.9 92 52.2
C03p76500 Brassica napus HOM05D003594 ORTHO05D004268 2.0e-15 85.9 92 52.2
BolC3t19907H Brassica oleracea HOM05D003594 ORTHO05D004268 2.6e-15 85.5 92 52.2
AUR62043305 Chenopodium quinoa HOM05D003594 ORTHO05D004268 3.4e-15 85.1 78 50.0
BcaB03g12203 Brassica carinata HOM05D003594 ORTHO05D004268 4.5e-15 84.7 92 50.0
CARHR029630 Cardamine hirsuta HOM05D003594 ORTHO05D004268 4.5e-15 84.7 90 48.9
A09p36300 Brassica napus HOM05D003594 ORTHO05D004268 5.9e-15 84.3 90 50.0
Potri.010G238000 Populus trichocarpa HOM05D003594 ORTHO05D004268 5.9e-15 84.3 80 51.2
Sabra10G0186200 Salix brachista HOM05D003594 ORTHO05D004268 5.9e-15 84.3 81 49.4
Aa31sc91G80 Aethionema arabicum HOM05D003594 ORTHO05D004268 7.7e-15 84.0 87 50.6
Sp1g26080 Schrenkiella parvula HOM05D003594 ORTHO05D004268 7.7e-15 84.0 90 47.8
Carub.0001s2847 Capsella rubella HOM05D003594 ORTHO05D004268 1.0e-14 83.6 90 48.9
AL1G44160 Arabidopsis lyrata HOM05D003594 ORTHO05D004268 1.7e-14 82.8 90 50.0
AT1G30240 Arabidopsis thaliana HOM05D003594 ORTHO05D004268 5.0e-14 81.3 90 48.9
arahy.Tifrunner.gnm1.ann1.8EA83L Arachis hypogaea HOM05D003594 ORTHO05D004268 6.5e-14 80.9 83 47.0
arahy.Tifrunner.gnm1.ann1.Q3AX4Y Arachis hypogaea HOM05D003594 ORTHO05D004268 6.5e-14 80.9 83 47.0
Thhalv10006813m.g Eutrema salsugineum HOM05D003594 ORTHO05D004268 1.1e-13 80.1 90 47.8
Oeu025587.1 Olea europaea HOM05D003594 ORTHO05D004268 1.1e-13 80.1 79 51.9
BcaB07g32622 Brassica carinata HOM05D003594 ORTHO05D004268 1.9e-13 79.3 90 47.8
BraA09t39154Z Brassica rapa HOM05D003594 ORTHO05D004268 1.9e-13 79.3 90 46.7
BcaC05g27050 Brassica carinata HOM05D003594 ORTHO05D004268 3.2e-13 78.6 90 47.8
BolC5t31639H Brassica oleracea HOM05D003594 ORTHO05D004268 3.2e-13 78.6 90 47.8
COL.COLO4_28858 Corchorus olitorius HOM05D003594 ORTHO05D004268 4.2e-13 78.2 89 50.6
C05p29080 Brassica napus HOM05D003594 ORTHO05D004268 7.2e-13 77.4 90 46.7
Gohir.A06G169100 Gossypium hirsutum HOM05D003594 ORTHO05D004268 1.2e-12 76.6 93 44.1
Gohir.D06G176700 Gossypium hirsutum HOM05D003594 ORTHO05D004268 2.1e-12 75.9 93 43.0
Gorai.010G208000 Gossypium raimondii HOM05D003594 ORTHO05D004268 2.1e-12 75.9 93 43.0
CDE09G0981 Ceratophyllum demersum HOM05D003594 ORTHO05D004268 3.6e-12 75.1 81 45.7
Dinv06533 Davidia involucrata HOM05D003594 ORTHO05D004268 2.3e-11 72.4 78 48.7
Gohir.D09G017550 Gossypium hirsutum HOM05D003594 ORTHO05D004268 3.3e-10 68.6 82 43.9
Gorai.006G020600 Gossypium raimondii HOM05D003594 ORTHO05D004268 3.3e-10 68.6 82 43.9
SHI24302 Sapria himalayana HOM05D003594 ORTHO05D004268 9.7e-10 67.0 89 42.7
Gohir.A09G018150 Gossypium hirsutum HOM05D003594 ORTHO05D004268 2.2e-09 65.9 82 42.7
HPP92_013069 Vanilla planifolia HOM05D003594 ORTHO05D004268 2.8e-09 65.5 81 37.0
Os05g0295900 Oryza sativa ssp. japonica HOM05D003594 ORTHO05D004268 4.1e-08 61.6 79 40.5
Aa31LG6G5510 Aethionema arabicum HOM05D003594 ORTHO05D004268 9.1e-08 60.5 78 43.6
Lj1g0028024 Lotus japonicus HOM05D003594 ORTHO05D004268 9.1e-08 60.5 78 46.2
Duzib052G0830 Durio zibethinus HOM05D003594 ORTHO05D004268 1.5e-07 59.7 90 40.0
Mapoly0108s0040 Marchantia polymorpha HOM05D003594 ORTHO05D004268 6.5e-06 54.3 75 42.7


User provided reference genes

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