Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_25296 Corylus avellana HOM05D002074 ORTHO05D024721 2.0e-73 278.9 130 100.0
Cfa013459 Carpinus fangiana HOM05D002074 ORTHO05D002164 7.5e-36 154.1 97 78.4
Haze_22033 Corylus avellana HOM05D002074 ORTHO05D002164 1.3e-35 153.3 97 78.4
Haze_22036 Corylus avellana HOM05D002074 ORTHO05D002164 1.3e-35 153.3 97 78.4
TWI32G0531 Tripterygium wilfordii HOM05D002074 ORTHO05D002164 1.1e-23 113.6 95 56.8
QL02p046637 Quercus lobata HOM05D002074 ORTHO05D024721 9.5e-23 110.5 100 60.0
CsaV3_1G031940 Cucumis sativus L. HOM05D002074 ORTHO05D002164 4.4e-20 101.7 89 55.1
Prupe.1G074200 Prunus persica HOM05D002074 ORTHO05D002164 7.6e-20 100.9 98 50.0
Psat1g143760 Pisum sativum HOM05D002074 ORTHO05D002164 1.3e-19 100.1 90 54.4
MELO3C017422.2 Cucumis melo HOM05D002074 ORTHO05D002164 2.2e-19 99.4 90 53.3
Sed0005787 Sechium edule HOM05D002074 ORTHO05D002164 3.8e-19 98.6 89 56.2
TAR383G0450 Trochodendron aralioides HOM05D002074 ORTHO05D002164 8.4e-19 97.4 91 53.8
AT5G57140 Arabidopsis thaliana HOM05D002074 ORTHO05D002164 2.4e-18 95.9 91 49.5
Glyma.15G166900 Glycine max HOM05D002074 ORTHO05D002164 2.4e-18 95.9 90 53.3
VMungo1309G0484 Vigna mungo HOM05D002074 ORTHO05D002164 2.4e-18 95.9 89 55.1
Medtr2g038080 Medicago truncatula HOM05D002074 ORTHO05D002164 3.2e-18 95.5 90 56.7
Glyma.09G060300 Glycine max HOM05D002074 ORTHO05D002164 4.2e-18 95.1 90 54.4
Haze_25294 Corylus avellana HOM05D002074 ORTHO05D165548 5.4e-18 94.7 48 91.7
TPR.G7567 Trifolium pratense HOM05D002074 ORTHO05D002164 5.4e-18 94.7 90 55.6
ClCG06G013670 Citrullus lanatus HOM05D002074 ORTHO05D002164 7.1e-18 94.4 90 51.1
THA.LOC104811767 Tarenaya hassleriana HOM05D002074 ORTHO05D002164 7.1e-18 94.4 98 49.0
Gohir.D04G007400 Gossypium hirsutum HOM05D002074 ORTHO05D002164 9.2e-18 94.0 97 51.5
Gorai.012G009100 Gossypium raimondii HOM05D002074 ORTHO05D002164 9.2e-18 94.0 97 51.5
AL8G33070 Arabidopsis lyrata HOM05D002074 ORTHO05D002164 1.2e-17 93.6 91 46.2
Eucgr.C02209 Eucalyptus grandis HOM05D002074 ORTHO05D002164 1.2e-17 93.6 90 48.9
Cc06_g17480 Coffea canephora HOM05D002074 ORTHO05D002164 1.6e-17 93.2 91 50.5
Oeu044667.1 Olea europaea HOM05D002074 ORTHO05D002164 2.1e-17 92.8 91 53.8
Sp6g18870 Schrenkiella parvula HOM05D002074 ORTHO05D002164 2.1e-17 92.8 91 45.1
BcaC03g14178 Brassica carinata HOM05D002074 ORTHO05D002164 3.5e-17 92.0 91 45.1
C02p14530 Brassica napus HOM05D002074 ORTHO05D002164 3.5e-17 92.0 91 45.1
BolC2t07577H Brassica oleracea HOM05D002074 ORTHO05D002164 3.5e-17 92.0 91 45.1
Ca_02114_v3 Cicer arietinum L. HOM05D002074 ORTHO05D002164 3.5e-17 92.0 90 51.1
Gohir.A05G408100 Gossypium hirsutum HOM05D002074 ORTHO05D002164 3.5e-17 92.0 97 50.5
Thecc.09G187300 Theobroma cacao HOM05D002074 ORTHO05D002164 3.5e-17 92.0 95 49.5
BcaB08g35991 Brassica carinata HOM05D002074 ORTHO05D002164 4.6e-17 91.7 100 44.0
CARHR270920 Cardamine hirsuta HOM05D002074 ORTHO05D002164 4.6e-17 91.7 91 45.1
PSO170G0633 Papaver somniferum HOM05D002074 ORTHO05D002164 4.6e-17 91.7 85 52.9
Atru.chr7.948 Acer truncatum HOM05D002074 ORTHO05D002164 7.8e-17 90.9 92 47.8
Aa31LG3G13030 Aethionema arabicum HOM05D002074 ORTHO05D004834 7.8e-17 90.9 91 46.2
Thhalv10013720m.g Eutrema salsugineum HOM05D002074 ORTHO05D002164 1.3e-16 90.1 92 44.6
Hma1.2p1_0235F.1_g098710 Hydrangea macrophylla HOM05D002074 ORTHO05D002164 1.3e-16 90.1 89 50.6
Peaxi162Scf00231g01017 Petunia axillaris HOM05D002074 ORTHO05D002164 1.7e-16 89.7 95 49.5
Potri.006G074500 Populus trichocarpa HOM05D002074 ORTHO05D002164 1.7e-16 89.7 87 50.6
Nn2g12730 Nelumbo nucifera HOM05D002074 ORTHO05D024721 2.3e-16 89.4 91 49.5
MSTRG.5938 Avicennia marina HOM05D002074 ORTHO05D002164 3.9e-16 88.6 99 47.5
Dinv25453 Davidia involucrata HOM05D002074 ORTHO05D002164 5.1e-16 88.2 97 44.3
vmacro05992 Vaccinium macrocarpon HOM05D002074 ORTHO05D002164 5.1e-16 88.2 97 44.3
Carub.0008s1765 Capsella rubella HOM05D002074 ORTHO05D002164 6.6e-16 87.8 91 44.0
Manes.14G162132 Manihot esculenta HOM05D002074 ORTHO05D002164 6.6e-16 87.8 98 48.0
BcaB05g22324 Brassica carinata HOM05D002074 ORTHO05D002164 8.7e-16 87.4 91 42.9
COL.COLO4_06922 Corchorus olitorius HOM05D002074 ORTHO05D002164 8.7e-16 87.4 90 51.1
GSVIVG01029307001 Vitis vinifera HOM05D002074 ORTHO05D002164 8.7e-16 87.4 88 47.7
Duzib150G0152 Durio zibethinus HOM05D002074 ORTHO05D002164 1.1e-15 87.0 90 46.7
BcaC04g19997 Brassica carinata HOM05D002074 ORTHO05D002164 2.5e-15 85.9 92 42.4
BcaC04g20000 Brassica carinata HOM05D002074 ORTHO05D002164 2.5e-15 85.9 92 42.4
C09p48950 Brassica napus HOM05D002074 ORTHO05D002164 2.5e-15 85.9 92 42.4
BolC9t57747H Brassica oleracea HOM05D002074 ORTHO05D002164 2.5e-15 85.9 92 42.4
A10p14490 Brassica napus HOM05D002074 ORTHO05D002164 3.3e-15 85.5 92 43.5
Nitab4.5_0001245g0030 Nicotiana tabacum HOM05D002074 ORTHO05D002164 3.3e-15 85.5 90 50.0
Nitab4.5_0004784g0020 Nicotiana tabacum HOM05D002074 ORTHO05D002164 3.3e-15 85.5 90 50.0
Ciclev10008494m.g Citrus clementina HOM05D002074 ORTHO05D002164 5.6e-15 84.7 89 43.8
Potri.006G074300 Populus trichocarpa HOM05D002074 ORTHO05D002164 9.6e-15 84.0 87 48.3
Sabra06G0055300 Salix brachista HOM05D002074 ORTHO05D002164 9.6e-15 84.0 87 48.3
RcHm_v2.0_Chr4g0399201 Rosa chinensis HOM05D002074 ORTHO05D002164 1.3e-14 83.6 96 43.8
CSS0046233 Camellia sinensis var. sinensis HOM05D002074 ORTHO05D024721 1.6e-14 83.2 97 44.3
Lalb_Chr23g0276771 Lupinus albus HOM05D002074 ORTHO05D002164 1.6e-14 83.2 99 44.4
BraA10t43539Z Brassica rapa HOM05D002074 ORTHO05D002164 2.1e-14 82.8 92 42.4
MBI16_g30549_MAGBIO Magnolia biondii HOM05D002074 ORTHO05D002164 2.1e-14 82.8 94 46.8
GSVIVG01029309001 Vitis vinifera HOM05D002074 ORTHO05D002164 2.1e-14 82.8 99 44.4
MD04G1168800 Malus domestica HOM05D002074 ORTHO05D002164 2.8e-14 82.4 87 46.0
PGSC0003DMG400008519 Solanum tuberosum HOM05D002074 ORTHO05D002164 3.6e-14 82.0 90 47.8
Rhsim03G0267400 Rhododendron simsii HOM05D002074 ORTHO05D002164 4.8e-14 81.6 98 42.9
Aqoxy7G02871 Aquilegia oxysepala HOM05D002074 ORTHO05D002164 1.4e-13 80.1 90 46.7
FvH4_4g07080 Fragaria vesca HOM05D002074 ORTHO05D002164 1.4e-13 80.1 96 45.8
FAN12G1839 Fragaria x ananassa HOM05D002074 ORTHO05D002164 1.4e-13 80.1 96 45.8
SalBow3G2665 Salvia bowleyana HOM05D002074 ORTHO05D024721 1.4e-13 80.1 91 48.4
CAN.G33.16 Capsicum annuum HOM05D002074 ORTHO05D002164 1.8e-13 79.7 91 45.1
Lj6g0026354 Lotus japonicus HOM05D002074 ORTHO05D002164 2.4e-13 79.3 94 46.8
Sopen07g005240 Solanum pennellii HOM05D002074 ORTHO05D002164 2.4e-13 79.3 90 44.4
Migut.J00791 Erythranthe guttata HOM05D002074 ORTHO05D002164 6.9e-13 77.8 91 45.1
Lj2A389T90 Lonicera japonica HOM05D002074 ORTHO05D002164 9.0e-13 77.4 90 47.8
FAN17G2340 Fragaria x ananassa HOM05D002074 ORTHO05D002164 1.2e-12 77.0 96 44.8
EL10Ac8g19302 Beta vulgaris HOM05D002074 ORTHO05D002164 1.5e-12 76.6 98 37.8
SGA_v2.0_scaffold112G31603 Striga asiatica HOM05D002074 ORTHO05D002164 1.5e-12 76.6 100 41.0
Solyc07g009460.3 Solanum lycopersicum HOM05D002074 ORTHO05D002164 2.0e-12 76.3 90 43.3
ATR0580G213 Amborella trichopoda HOM05D002074 ORTHO05D002164 2.6e-12 75.9 86 46.5
Sabra06G0055500 Salix brachista HOM05D002074 ORTHO05D002164 2.6e-12 75.9 72 48.6
HanXRQChr03g0065471 Helianthus annuus HOM05D002074 ORTHO05D002164 7.6e-12 74.3 91 44.0
arahy.Tifrunner.gnm1.ann1.E5H6P5 Arachis hypogaea HOM05D002074 ORTHO05D002164 9.9e-12 73.9 92 46.7
arahy.Tifrunner.gnm1.ann1.NL79KX Arachis hypogaea HOM05D002074 ORTHO05D002164 9.9e-12 73.9 92 46.7
FAN07G1276 Fragaria x ananassa HOM05D002074 ORTHO05D002164 1.7e-11 73.2 98 42.9
CANSAT11G0953 Cannabis sativa HOM05D002074 ORTHO05D002164 3.2e-10 68.9 102 45.1
AUR62031277 Chenopodium quinoa HOM05D002074 ORTHO05D002164 3.2e-10 68.9 90 36.7
Lsat_1_v5_gn_7_55861 Lactuca sativa HOM05D002074 ORTHO05D002164 3.2e-10 68.9 98 41.8
AUR62027416 Chenopodium quinoa HOM05D002074 ORTHO05D002164 4.2e-10 68.6 90 36.7
CiPaw.07G197900 Carya illinoinensis HOM05D002074 ORTHO05D002164 1.2e-09 67.0 46 65.2
Sc20g0001220 Simmondsia chinensis HOM05D002074 ORTHO05D002164 1.6e-09 66.6 91 42.9
Ah.14g085360 Amaranthus hybridus HOM05D002074 ORTHO05D002164 6.0e-09 64.7 90 35.6
unitig_699.g19409 Utricularia gibba HOM05D002074 ORTHO05D002164 2.3e-08 62.8 35 74.3
Hund12767 Selenicereus undatus HOM05D002074 ORTHO05D002164 6.6e-08 61.2 91 36.3
Cpa.g.sc95.4 Carica papaya HOM05D002074 ORTHO05D002164 1.9e-07 59.7 34 70.6
HPP92_015380 Vanilla planifolia HOM05D002074 ORTHO05D002164 1.9e-07 59.7 87 37.9
SEGI_04086 Sequoiadendron giganteum HOM05D002074 ORTHO05D002164 2.1e-06 56.2 86 38.4
MD07G1164800 Malus domestica HOM05D002074 ORTHO05D002164 4.8e-06 55.1 34 67.6
DCAR_018018 Daucus carota HOM05D002074 ORTHO05D002164 8.1e-06 54.3 31 67.7


User provided reference genes

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