Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_25244 Corylus avellana HOM05D003115 ORTHO05D003595 1.5e-30 135.6 69 100.0
Haze_07640 Corylus avellana HOM05D003115 ORTHO05D003595 3.4e-19 97.8 52 98.1
Cfa010533 Carpinus fangiana HOM05D003115 ORTHO05D003595 4.9e-18 94.0 52 94.2
Cfa009508 Carpinus fangiana HOM05D003115 ORTHO05D003595 1.9e-17 92.0 52 92.3
QL04p081909 Quercus lobata HOM05D003115 ORTHO05D003595 1.5e-14 82.4 59 74.6
CiPaw.14G076100 Carya illinoinensis HOM05D003115 ORTHO05D003595 4.8e-13 77.4 52 76.9
Lj6C385T7 Lonicera japonica HOM05D003115 ORTHO05D003595 1.2e-11 72.8 52 61.5
CSS0000754 Camellia sinensis var. sinensis HOM05D003115 ORTHO05D003595 2.6e-11 71.6 52 69.2
CSS0038204 Camellia sinensis var. sinensis HOM05D003115 ORTHO05D003595 2.6e-11 71.6 52 69.2
Hund19003 Selenicereus undatus HOM05D003115 ORTHO05D003595 1.3e-10 69.3 59 50.8
Actinidia35847 Actinidia chinensis HOM05D003115 ORTHO05D003595 1.7e-10 68.9 52 63.5
TAR636G1491 Trochodendron aralioides HOM05D003115 ORTHO05D003595 2.2e-10 68.6 52 59.6
Hund29080 Selenicereus undatus HOM05D003115 ORTHO05D003595 4.9e-10 67.4 52 51.9
Hund29082 Selenicereus undatus HOM05D003115 ORTHO05D003595 4.9e-10 67.4 52 51.9
Peaxi162Scf00047g00136 Petunia axillaris HOM05D003115 ORTHO05D003595 6.4e-10 67.0 59 52.5
TWI56G0473 Tripterygium wilfordii HOM05D003115 ORTHO05D003595 8.4e-10 66.6 59 59.3
Gohir.D10G137700 Gossypium hirsutum HOM05D003115 ORTHO05D003595 1.1e-09 66.2 52 55.8
Gorai.011G152900 Gossypium raimondii HOM05D003115 ORTHO05D003595 1.1e-09 66.2 52 55.8
Atru.chr4.1597 Acer truncatum HOM05D003115 ORTHO05D003595 2.4e-09 65.1 52 59.6
Gohir.A10G128200 Gossypium hirsutum HOM05D003115 ORTHO05D003595 5.4e-09 63.9 52 53.8
Atru.chr10.1944 Acer truncatum HOM05D003115 ORTHO05D003595 7.1e-09 63.5 52 57.7
Lj6g0020396 Lotus japonicus HOM05D003115 ORTHO05D003595 7.1e-09 63.5 52 57.7
Nn4g23612 Nelumbo nucifera HOM05D003115 ORTHO05D003595 1.2e-08 62.8 52 53.8
arahy.Tifrunner.gnm1.ann1.01WSAY Arachis hypogaea HOM05D003115 ORTHO05D003595 1.6e-08 62.4 52 55.8
arahy.Tifrunner.gnm1.ann1.QS081X Arachis hypogaea HOM05D003115 ORTHO05D003595 1.6e-08 62.4 52 55.8
Glyma.18G016000 Glycine max HOM05D003115 ORTHO05D003595 2.1e-08 62.0 52 55.8
COL.COLO4_33741 Corchorus olitorius HOM05D003115 ORTHO05D003595 3.5e-08 61.2 51 49.0
Solyc09g092240.3 Solanum lycopersicum HOM05D003115 ORTHO05D003595 3.5e-08 61.2 52 50.0
Duzib212G0201 Durio zibethinus HOM05D003115 ORTHO05D003595 4.6e-08 60.8 52 48.1
Sed0014363 Sechium edule HOM05D003115 ORTHO05D003595 4.6e-08 60.8 52 50.0
SGA_v2.0_scaffold5G03024 Striga asiatica HOM05D003115 ORTHO05D003595 6.0e-08 60.5 52 53.8
Thecc.04G196300 Theobroma cacao HOM05D003115 ORTHO05D003595 6.0e-08 60.5 52 48.1
GSVIVG01021009001 Vitis vinifera HOM05D003115 ORTHO05D003595 6.0e-08 60.5 52 50.0
TPR.G14704 Trifolium pratense HOM05D003115 ORTHO05D003595 7.9e-08 60.1 52 57.7
COL.COLO4_20215 Corchorus olitorius HOM05D003115 ORTHO05D003595 1.0e-07 59.7 52 48.1
Phvul.001G253000 Phaseolus vulgaris HOM05D003115 ORTHO05D003595 1.0e-07 59.7 52 53.8
CAN.G1155.21 Capsicum annuum HOM05D003115 ORTHO05D003595 1.3e-07 59.3 52 50.0
AUR62020852 Chenopodium quinoa HOM05D003115 ORTHO05D003595 1.8e-07 58.9 64 43.8
DCAR_007830 Daucus carota HOM05D003115 ORTHO05D003595 1.8e-07 58.9 59 50.8
Nitab4.5_0012127g0010 Nicotiana tabacum HOM05D003115 ORTHO05D003595 1.8e-07 58.9 52 48.1
PGR119G1374 Punica granatum HOM05D003115 ORTHO05D003595 1.8e-07 58.9 52 50.0
AUR62018566 Chenopodium quinoa HOM05D003115 ORTHO05D003595 3.9e-07 57.8 64 43.8
Migut.B01882 Erythranthe guttata HOM05D003115 ORTHO05D003595 3.9e-07 57.8 52 53.8
Oeu043446.1 Olea europaea HOM05D003115 ORTHO05D003595 5.1e-07 57.4 52 51.9
Ca_07922_v3 Cicer arietinum L. HOM05D003115 ORTHO05D003595 6.7e-07 57.0 52 55.8
VMungo1383G2293 Vigna mungo HOM05D003115 ORTHO05D003595 6.7e-07 57.0 52 48.1
ClCG06G007990 Citrullus lanatus HOM05D003115 ORTHO05D003595 8.7e-07 56.6 54 50.0
Dinv16255 Davidia involucrata HOM05D003115 ORTHO05D003595 8.7e-07 56.6 59 52.5
FAN05G1620 Fragaria x ananassa HOM05D003115 ORTHO05D003595 1.1e-06 56.2 59 55.9
Medtr3g083970 Medicago truncatula HOM05D003115 ORTHO05D003595 1.1e-06 56.2 52 51.9
RcHm_v2.0_Chr6g0271321 Rosa chinensis HOM05D000001 ORTHO05D010702 1.1e-06 56.2 56 57.1
Sopen09g035170 Solanum pennellii HOM05D003115 ORTHO05D003595 1.1e-06 56.2 52 46.2
FAN02G0145 Fragaria x ananassa HOM05D003115 ORTHO05D003595 1.5e-06 55.8 59 54.2
Prupe.3G074200 Prunus persica HOM05D003115 ORTHO05D003595 2.5e-06 55.1 69 44.9
FAN14G0460 Fragaria x ananassa HOM05D003115 ORTHO05D003595 3.3e-06 54.7 59 54.2
Rhsim09G0059200 Rhododendron simsii HOM05D003115 ORTHO05D003595 3.3e-06 54.7 58 50.0
Ah.04g149340 Amaranthus hybridus HOM05D003115 ORTHO05D003595 4.3e-06 54.3 64 42.2
FvH4_6g30710 Fragaria vesca HOM05D003115 ORTHO05D003595 4.3e-06 54.3 59 54.2
Lalb_Chr23g0269101 Lupinus albus HOM05D003115 ORTHO05D003595 4.3e-06 54.3 52 51.9
MD17G1201300 Malus domestica HOM05D003115 ORTHO05D003595 4.3e-06 54.3 69 46.4
Oeu049761.1 Olea europaea HOM05D003115 ORTHO05D003595 5.6e-06 53.9 53 49.1
Rhsim02G0023500 Rhododendron simsii HOM05D003115 ORTHO05D003595 5.6e-06 53.9 58 46.6
SalBow3G3081 Salvia bowleyana HOM05D003115 ORTHO05D003595 5.6e-06 53.9 52 50.0
vmacro00444 Vaccinium macrocarpon HOM05D003115 ORTHO05D003595 5.6e-06 53.9 64 46.9
EL10Ac3g07463 Beta vulgaris HOM05D003115 ORTHO05D003595 9.6e-06 53.1 64 42.2
RcHm_v2.0_Chr2g0137101 Rosa chinensis HOM05D003115 ORTHO05D003595 9.6e-06 53.1 59 54.2


User provided reference genes

Program Settings