Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_25193 Corylus avellana HOM05D007729 ORTHO05D009724 1.1e-96 356.7 183 100.0
Haze_04087 Corylus avellana HOM05D007729 ORTHO05D009724 1.4e-88 329.7 180 95.0
QL03p018088 Quercus lobata HOM05D007729 ORTHO05D009724 8.6e-62 240.7 192 70.8
Haze_25604 Corylus avellana HOM05D007729 ORTHO05D009724 3.5e-55 218.8 117 96.6
Haze_15474 Corylus avellana HOM05D000683 ORTHO05D000507 3.4e-50 202.2 111 94.6
TWI56G1038 Tripterygium wilfordii HOM05D007729 ORTHO05D009724 7.6e-50 201.1 185 57.3
Dinv24421 Davidia involucrata HOM05D007729 ORTHO05D009724 1.7e-46 189.9 188 56.4
Hma1.2p1_1320F.1_g275420 Hydrangea macrophylla HOM05D007729 ORTHO05D009724 2.3e-46 189.5 185 56.2
RcHm_v2.0_Chr3g0456781 Rosa chinensis HOM05D007729 ORTHO05D009724 3.9e-46 188.7 189 54.5
Aqoxy2G02816 Aquilegia oxysepala HOM05D007729 ORTHO05D009724 1.9e-45 186.4 188 55.9
Cpa.g.sc48.137 Carica papaya HOM05D007729 ORTHO05D009724 4.3e-45 185.3 186 54.3
FvH4_6g07160 Fragaria vesca HOM05D007729 ORTHO05D009724 4.3e-45 185.3 191 53.4
FAN05G4184 Fragaria x ananassa HOM05D007729 ORTHO05D009724 4.3e-45 185.3 191 52.9
FAN14G4369 Fragaria x ananassa HOM05D007729 ORTHO05D009724 4.3e-45 185.3 191 53.4
Manes.09G175100 Manihot esculenta HOM05D007729 ORTHO05D009724 4.3e-45 185.3 185 56.8
THA.LOC104805912 Tarenaya hassleriana HOM05D007729 ORTHO05D009724 4.3e-45 185.3 187 57.8
CSS0040240 Camellia sinensis var. sinensis HOM05D007729 ORTHO05D009724 7.3e-45 184.5 187 54.0
FAN09G4655 Fragaria x ananassa HOM05D007729 ORTHO05D009724 7.3e-45 184.5 191 52.9
CARHR009150 Cardamine hirsuta HOM05D007729 ORTHO05D009724 2.1e-44 183.0 187 55.6
Nn4g25665 Nelumbo nucifera HOM05D007729 ORTHO05D009724 4.7e-44 181.8 188 53.7
Sp1g07780 Schrenkiella parvula HOM05D007729 ORTHO05D009724 8.1e-44 181.0 187 55.6
Atru.chr2.143 Acer truncatum HOM05D007729 ORTHO05D009724 1.4e-43 180.3 199 51.3
Aa31LG1G6090 Aethionema arabicum HOM05D007729 ORTHO05D009724 3.1e-43 179.1 187 55.1
Thhalv10007209m.g Eutrema salsugineum HOM05D007729 ORTHO05D009724 4.0e-43 178.7 187 55.6
GSVIVG01031211001 Vitis vinifera HOM05D007729 ORTHO05D009724 6.9e-43 177.9 188 53.2
TAR365G0479 Trochodendron aralioides HOM05D007729 ORTHO05D009724 1.5e-42 176.8 188 52.7
Actinidia16844 Actinidia chinensis HOM05D007729 ORTHO05D009724 2.0e-42 176.4 188 51.1
AT1G09195 Arabidopsis thaliana HOM05D007729 ORTHO05D009724 3.4e-42 175.6 187 55.1
Carub.0001s0852 Capsella rubella HOM05D007729 ORTHO05D009724 4.4e-42 175.3 187 55.1
Potri.005G020100 Populus trichocarpa HOM05D007729 ORTHO05D009724 5.8e-42 174.9 185 53.5
AL1G19670 Arabidopsis lyrata HOM05D007729 ORTHO05D009724 7.6e-42 174.5 188 54.3
PGR031G2787 Punica granatum HOM05D007729 ORTHO05D009724 7.6e-42 174.5 188 51.6
vmacro01545 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 7.6e-42 174.5 186 53.2
Lj9A208G24 Lonicera japonica HOM05D007729 ORTHO05D009724 1.3e-41 173.7 189 50.3
CANSAT54G0579 Cannabis sativa HOM05D007729 ORTHO05D009724 6.4e-41 171.4 195 51.3
Nitab4.5_0000368g0330 Nicotiana tabacum HOM05D007729 ORTHO05D009724 6.4e-41 171.4 191 50.8
Lsat_1_v5_gn_7_73440 Lactuca sativa HOM05D007729 ORTHO05D009724 8.4e-41 171.0 188 49.5
Sabra05G0026100 Salix brachista HOM05D005361 ORTHO05D006518 8.4e-41 171.0 185 53.0
SalBow7G3736 Salvia bowleyana HOM05D007729 ORTHO05D009724 8.4e-41 171.0 187 51.3
Duzib177G0448 Durio zibethinus HOM05D007729 ORTHO05D009724 2.4e-40 169.5 187 54.0
Peaxi162Scf00673g00025 Petunia axillaris HOM05D007729 ORTHO05D009724 3.2e-40 169.1 190 52.6
Solyc01g100260.4 Solanum lycopersicum HOM05D007729 ORTHO05D009724 3.2e-40 169.1 189 50.3
C08p12530 Brassica napus HOM05D007729 ORTHO05D009724 9.3e-40 167.5 183 56.3
BolC8t48891H Brassica oleracea HOM05D007729 ORTHO05D009724 9.3e-40 167.5 185 55.7
PGSC0003DMG400024735 Solanum tuberosum HOM05D007729 ORTHO05D009724 9.3e-40 167.5 189 50.8
Lalb_Chr02g0147931 Lupinus albus HOM05D007729 ORTHO05D009724 1.2e-39 167.2 186 50.5
MBI18_g24956_MAGBIO Magnolia biondii HOM05D007729 ORTHO05D009724 1.2e-39 167.2 197 47.7
Ciclev10000704m.g Citrus clementina HOM05D007729 ORTHO05D009724 2.1e-39 166.4 191 49.2
BcaC07g38483 Brassica carinata HOM05D007729 ORTHO05D009724 2.7e-39 166.0 183 55.7
BraA08t35386Z Brassica rapa HOM05D007729 ORTHO05D009724 2.7e-39 166.0 187 54.5
Sopen01g043770 Solanum pennellii HOM05D007729 ORTHO05D009724 2.7e-39 166.0 189 49.2
A08p34750 Brassica napus HOM05D007729 ORTHO05D009724 3.5e-39 165.6 187 54.5
Nitab4.5_0006072g0050 Nicotiana tabacum HOM05D007729 ORTHO05D009724 4.6e-39 165.2 189 50.3
PSO210G3025 Papaver somniferum HOM05D007729 ORTHO05D009724 6.0e-39 164.9 192 51.0
CDE12G0453 Ceratophyllum demersum HOM05D007729 ORTHO05D009724 1.3e-38 163.7 186 47.8
HanXRQChr09g0268291 Helianthus annuus HOM05D007729 ORTHO05D009724 1.3e-38 163.7 191 49.7
PSO761G0658 Papaver somniferum HOM05D007729 ORTHO05D009724 1.3e-38 163.7 192 51.6
Gorai.013G128200 Gossypium raimondii HOM05D007729 ORTHO05D009724 1.7e-38 163.3 189 49.7
Gohir.D13G114300 Gossypium hirsutum HOM05D007729 ORTHO05D009724 2.3e-38 162.9 189 49.2
COL.COLO4_04132 Corchorus olitorius HOM05D007729 ORTHO05D009724 1.1e-37 160.6 191 49.7
ECA236G3528 Erigeron canadensis HOM05D007729 ORTHO05D009724 1.5e-37 160.2 187 51.3
Migut.B00991 Erythranthe guttata HOM05D007729 ORTHO05D009724 1.5e-37 160.2 187 49.7
Oeu053698.1 Olea europaea HOM05D007729 ORTHO05D009724 1.5e-37 160.2 189 50.3
Gohir.A13G111500 Gossypium hirsutum HOM05D007729 ORTHO05D009724 2.5e-37 159.5 189 48.1
Thecc.05G320400 Theobroma cacao HOM05D007729 ORTHO05D009724 5.6e-37 158.3 189 49.7
CAN.G1273.5 Capsicum annuum HOM05D007729 ORTHO05D009724 2.1e-36 156.4 190 47.9
Duzib147G0321 Durio zibethinus HOM05D007729 ORTHO05D009724 2.1e-36 156.4 189 48.1
MSTRG.20396 Avicennia marina HOM05D007729 ORTHO05D009724 3.6e-36 155.6 191 48.7
SGA_v2.0_scaffold53G19323 Striga asiatica HOM05D007729 ORTHO05D009724 8.1e-36 154.5 190 46.3
Cc02_g34750 Coffea canephora HOM05D007729 ORTHO05D009724 7.6e-34 147.9 190 45.3
AUR62005264 Chenopodium quinoa HOM05D007729 ORTHO05D009724 6.4e-33 144.8 188 46.8
DCAR_021068 Daucus carota HOM05D007729 ORTHO05D009724 8.4e-33 144.4 181 45.9
DCAR_021070 Daucus carota HOM05D007729 ORTHO05D009724 8.4e-33 144.4 181 45.9
ATR0706G084 Amborella trichopoda HOM05D007729 ORTHO05D009724 7.1e-32 141.4 167 46.7
EL10Ac4g09861 Beta vulgaris HOM05D007729 ORTHO05D009724 7.1e-32 141.4 190 48.4
SEGI_22290 Sequoiadendron giganteum HOM05D007729 ORTHO05D009724 6.0e-31 138.3 195 40.5
Pp3c5_5230 Physcomitrium patens HOM05D007729 ORTHO05D009724 1.3e-30 137.1 197 40.6
Pp3c6_24770 Physcomitrium patens HOM05D007729 ORTHO05D009724 1.3e-30 137.1 194 40.7
Pp3c27_4900 Physcomitrium patens HOM05D007729 ORTHO05D009724 2.5e-29 132.9 196 40.3
PRCOL_00006313 Prasinoderma coloniale HOM05D007729 ORTHO05D009724 1.4e-24 117.1 161 47.8
AUR62000694 Chenopodium quinoa HOM05D007729 ORTHO05D009724 3.5e-23 112.5 186 42.5
Prupe.6G315600 Prunus persica HOM05D007729 ORTHO05D009724 6.5e-17 91.7 74 62.2
Hund21744 Selenicereus undatus HOM05D007729 ORTHO05D009724 5.0e-09 65.5 118 40.7


User provided reference genes

Program Settings