Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_25151 Corylus avellana HOM05D007422 ORTHO05D009333 1.7e-58 229.2 119 100.0
Cfa002851 Carpinus fangiana HOM05D007422 ORTHO05D009333 3.3e-38 161.8 89 96.6
CiPaw.04G085200 Carya illinoinensis HOM05D007422 ORTHO05D009333 3.7e-29 131.7 89 79.8
RcHm_v2.0_Chr2g0118261 Rosa chinensis HOM05D007422 ORTHO05D009333 6.5e-26 120.9 89 73.0
Manes.12G151600 Manihot esculenta HOM05D007422 ORTHO05D009333 1.1e-25 120.2 91 75.8
Lalb_Chr08g0238531 Lupinus albus HOM05D007422 ORTHO05D009333 1.9e-25 119.4 90 73.3
Potri.005G056500 Populus trichocarpa HOM05D007422 ORTHO05D009333 7.2e-25 117.5 89 70.8
Atru.chr4.503 Acer truncatum HOM05D007422 ORTHO05D009333 9.3e-25 117.1 89 73.0
Glyma.06G150900 Glycine max HOM05D007422 ORTHO05D009333 9.3e-25 117.1 89 70.8
Medtr3g095670 Medicago truncatula HOM05D007422 ORTHO05D009333 9.3e-25 117.1 89 71.9
QL06p030244 Quercus lobata HOM05D007422 ORTHO05D009333 9.3e-25 117.1 75 81.3
Lj1g0018544 Lotus japonicus HOM05D007422 ORTHO05D009333 1.2e-24 116.7 89 70.8
Manes.12G151400 Manihot esculenta HOM05D007422 ORTHO05D009333 1.2e-24 116.7 89 70.8
Glyma.04G215300 Glycine max HOM05D007422 ORTHO05D009333 1.6e-24 116.3 89 69.7
TPR.G18719 Trifolium pratense HOM05D007422 ORTHO05D009333 2.1e-24 115.9 89 70.8
Psat5g063240 Pisum sativum HOM05D007422 ORTHO05D009333 2.7e-24 115.5 89 69.7
PGR102G2924 Punica granatum HOM05D007422 ORTHO05D009333 7.9e-24 114.0 89 70.8
VMungo1309G2444 Vigna mungo HOM05D007422 ORTHO05D009333 1.0e-23 113.6 83 71.1
Phvul.009G147900 Phaseolus vulgaris HOM05D007422 ORTHO05D009333 1.3e-23 113.2 83 69.9
Ciclev10026766m.g Citrus clementina HOM05D007422 ORTHO05D009333 1.8e-23 112.8 89 69.7
Gohir.D04G029700 Gossypium hirsutum HOM05D007422 ORTHO05D009333 1.8e-23 112.8 89 70.8
Gorai.012G032800 Gossypium raimondii HOM05D007422 ORTHO05D009333 1.8e-23 112.8 89 70.8
COL.COLO4_21895 Corchorus olitorius HOM05D007422 ORTHO05D009333 2.3e-23 112.5 91 73.6
Thecc.01G123800 Theobroma cacao HOM05D007422 ORTHO05D009333 3.9e-23 111.7 90 72.2
Gohir.A05G386900 Gossypium hirsutum HOM05D007422 ORTHO05D009333 5.1e-23 111.3 89 71.9
Cpa.g.sc42.105 Carica papaya HOM05D007422 ORTHO05D009333 1.1e-22 110.2 89 70.8
THA.LOC104821861 Tarenaya hassleriana HOM05D007422 ORTHO05D009333 1.1e-22 110.2 89 68.5
Solyc03g078350.3 Solanum lycopersicum HOM05D007422 ORTHO05D009333 1.5e-22 109.8 89 62.9
Prupe.6G165000 Prunus persica HOM05D007422 ORTHO05D009333 1.9e-22 109.4 89 69.7
Duzib264G1170 Durio zibethinus HOM05D007422 ORTHO05D009333 3.3e-22 108.6 90 70.0
Dinv18494 Davidia involucrata HOM05D007422 ORTHO05D009333 5.7e-22 107.8 89 67.4
MD05G1015900 Malus domestica HOM05D007422 ORTHO05D009333 5.7e-22 107.8 89 67.4
Sopen03g021130 Solanum pennellii HOM05D007422 ORTHO05D009333 5.7e-22 107.8 89 61.8
arahy.Tifrunner.gnm1.ann1.DL1AJH Arachis hypogaea HOM05D007422 ORTHO05D009333 9.7e-22 107.1 89 67.4
Cc07_g17580 Coffea canephora HOM05D007422 ORTHO05D009333 9.7e-22 107.1 89 65.2
HanXRQChr17g0559811 Helianthus annuus HOM05D007422 ORTHO05D009333 1.6e-21 106.3 89 68.5
Lsat_1_v5_gn_8_142161 Lactuca sativa HOM05D007422 ORTHO05D009333 1.6e-21 106.3 83 69.9
PGSC0003DMG400018421 Solanum tuberosum HOM05D007422 ORTHO05D009333 1.6e-21 106.3 90 63.3
MSTRG.2680 Avicennia marina HOM05D007422 ORTHO05D009333 3.7e-21 105.1 89 65.2
CANSAT01G0526 Cannabis sativa HOM05D007422 ORTHO05D009333 3.7e-21 105.1 87 71.3
Sp1g36060 Schrenkiella parvula HOM05D007422 ORTHO05D009333 3.7e-21 105.1 89 66.3
Sc03g0005110 Simmondsia chinensis HOM05D007422 ORTHO05D009333 3.7e-21 105.1 88 67.0
Hund04464 Selenicereus undatus HOM05D007422 ORTHO05D009333 4.8e-21 104.8 91 68.1
AT1G49170 Arabidopsis thaliana HOM05D007422 ORTHO05D009333 6.3e-21 104.4 90 65.6
arahy.Tifrunner.gnm1.ann1.PIK6SY Arachis hypogaea HOM05D007422 ORTHO05D009333 6.3e-21 104.4 90 66.7
MELO3C023262.2 Cucumis melo HOM05D007422 ORTHO05D009333 6.3e-21 104.4 89 66.3
TWI75G1659 Tripterygium wilfordii HOM05D007422 ORTHO05D009333 8.2e-21 104.0 89 70.8
Aa31LG10G5060 Aethionema arabicum HOM05D007422 ORTHO05D009333 1.4e-20 103.2 90 62.2
CARHR039170 Cardamine hirsuta HOM05D007422 ORTHO05D009333 1.4e-20 103.2 93 63.4
Carub.0001s3836 Capsella rubella HOM05D007422 ORTHO05D009333 1.8e-20 102.8 90 65.6
CAN.G900.53 Capsicum annuum HOM05D007422 ORTHO05D009333 1.8e-20 102.8 90 65.6
AL1G56040 Arabidopsis lyrata HOM05D007422 ORTHO05D009333 2.4e-20 102.4 90 65.6
ECA233G2273 Erigeron canadensis HOM05D002719 ORTHO05D002938 3.1e-20 102.1 89 64.0
A05p20740 Brassica napus HOM05D007422 ORTHO05D009333 4.1e-20 101.7 90 63.3
BraA05t20982Z Brassica rapa HOM05D007422 ORTHO05D009333 4.1e-20 101.7 90 63.3
Ah.02g122030 Amaranthus hybridus HOM05D007422 ORTHO05D009333 5.3e-20 101.3 89 65.2
ClCG02G000660 Citrullus lanatus HOM05D007422 ORTHO05D009333 5.3e-20 101.3 88 65.9
Ca_16922_v3 Cicer arietinum L. HOM05D007422 ORTHO05D009333 6.9e-20 100.9 89 66.3
Migut.H01100 Erythranthe guttata HOM05D007422 ORTHO05D009333 6.9e-20 100.9 89 61.8
Nitab4.5_0006443g0040 Nicotiana tabacum HOM05D007422 ORTHO05D009333 6.9e-20 100.9 89 59.6
Thhalv10011860m.g Eutrema salsugineum HOM05D007422 ORTHO05D009333 9.0e-20 100.5 89 64.0
Sabra05G0048800 Salix brachista HOM05D007422 ORTHO05D009333 9.0e-20 100.5 100 65.0
SGA_v2.0_scaffold137G35131 Striga asiatica HOM05D007422 ORTHO05D009333 9.0e-20 100.5 89 61.8
vmacro18659 Vaccinium macrocarpon HOM05D007422 ORTHO05D009333 9.0e-20 100.5 90 63.3
BcaC05g27531 Brassica carinata HOM05D007422 ORTHO05D009333 1.2e-19 100.1 91 64.8
C05p35090 Brassica napus HOM05D007422 ORTHO05D009333 1.2e-19 100.1 91 64.8
BolC5t32228H Brassica oleracea HOM05D007422 ORTHO05D009333 1.2e-19 100.1 91 64.8
AUR62017925 Chenopodium quinoa HOM05D007422 ORTHO05D009333 1.5e-19 99.8 88 68.2
HPP92_006817 Vanilla planifolia HOM05D007422 ORTHO05D009333 2.0e-19 99.4 89 59.6
CDE08G0547 Ceratophyllum demersum HOM05D007422 ORTHO05D009333 2.6e-19 99.0 80 63.8
DCAR_031485 Daucus carota HOM05D007422 ORTHO05D009333 3.4e-19 98.6 83 62.7
CSS0008685 Camellia sinensis var. sinensis HOM05D007422 ORTHO05D009333 5.9e-19 97.8 90 62.2
PSO170G3514 Papaver somniferum HOM05D007422 ORTHO05D009333 1.0e-18 97.1 89 56.2
TWI31G1366 Tripterygium wilfordii HOM05D007422 ORTHO05D009333 1.3e-18 96.7 89 64.0
Oeu039761.1 Olea europaea HOM05D007422 ORTHO05D009333 1.7e-18 96.3 89 59.6
TAR628G0864 Trochodendron aralioides HOM05D007422 ORTHO05D009333 2.9e-18 95.5 89 58.4
Zm00001eb076010 Zea mays HOM05D007422 ORTHO05D009333 2.9e-18 95.5 89 58.4
MBI17_g11164_MAGBIO Magnolia biondii HOM05D007422 ORTHO05D009333 5.0e-18 94.7 62 72.6
CDE06G1708 Ceratophyllum demersum HOM05D007422 ORTHO05D009333 8.5e-18 94.0 80 62.5
ATR0772G041 Amborella trichopoda HOM05D007422 ORTHO05D009333 1.1e-17 93.6 89 57.3
Aqoxy5G02143 Aquilegia oxysepala HOM05D007422 ORTHO05D009333 1.1e-17 93.6 96 56.2
Nn1g06132 Nelumbo nucifera HOM05D007422 ORTHO05D009333 1.4e-17 93.2 89 59.6
SEGI_34968 Sequoiadendron giganteum HOM05D007422 ORTHO05D009333 9.4e-17 90.5 86 54.7
Peaxi162Scf00583g00227 Petunia axillaris HOM05D007422 ORTHO05D009333 7.9e-16 87.4 89 57.3
FvH4_1g23360 Fragaria vesca HOM05D007422 ORTHO05D009333 1.4e-15 86.7 72 70.8
FAN19G2306 Fragaria x ananassa HOM05D007422 ORTHO05D009333 1.4e-15 86.7 72 70.8
Os04g0686300 Oryza sativa ssp. japonica HOM05D007422 ORTHO05D009333 1.4e-15 86.7 89 56.2
PSO017G6029 Papaver somniferum HOM05D007422 ORTHO05D009333 1.8e-15 86.3 91 52.7
unitig_60.g25621 Utricularia gibba HOM05D007422 ORTHO05D009333 1.8e-15 86.3 82 52.4
BcaB02g11281 Brassica carinata HOM05D007422 ORTHO05D009333 2.3e-15 85.9 88 60.2
BcaB02g11285 Brassica carinata HOM05D007422 ORTHO05D009333 1.1e-14 83.6 123 46.3
AUR62003614 Chenopodium quinoa HOM05D007422 ORTHO05D009333 4.3e-14 81.6 95 52.6
Mapoly0054s0054 Marchantia polymorpha HOM05D007422 ORTHO05D009333 5.7e-14 81.3 61 63.9
Prupe.6G164500 Prunus persica HOM05D007422 ORTHO05D009333 3.7e-13 78.6 74 63.5
Sed0005171 Sechium edule HOM05D007422 ORTHO05D009333 3.8e-10 68.6 55 60.0
Pp3c13_2330 Physcomitrium patens HOM05D007422 ORTHO05D009333 4.2e-09 65.1 74 52.7
FAN23G3068 Fragaria x ananassa HOM05D007422 ORTHO05D009333 1.2e-08 63.5 58 67.2
EL10Ac6g15266 Beta vulgaris HOM05D007422 ORTHO05D009333 5.1e-07 58.2 32 84.4
CsaV3_2G018110 Cucumis sativus L. HOM05D007422 ORTHO05D009333 2.0e-06 56.2 33 75.8
Eucgr.H04923 Eucalyptus grandis HOM05D007422 ORTHO05D009333 5.7e-06 54.7 29 89.7
Rhsim08G0003400 Rhododendron simsii HOM05D005663 ORTHO05D007258 7.4e-06 54.3 43 65.1


User provided reference genes

Program Settings