Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_25123 Corylus avellana HOM05D000003 ORTHO05D000167 1.8e-90 335.9 164 100.0
Haze_09308 Corylus avellana HOM05D001621 ORTHO05D000167 4.2e-15 85.5 123 36.6
Haze_01709 Corylus avellana HOM05D004092 ORTHO05D005448 8.7e-13 77.8 130 33.8
CiPaw.11G082900 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.1e-12 77.4 128 32.0
CiPaw.10G104100 Carya illinoinensis HOM05D000003 ORTHO05D000167 1.9e-12 76.6 134 35.1
Haze_27622 Corylus avellana HOM05D000003 ORTHO05D000167 4.3e-12 75.5 122 31.1
Haze_08252 Corylus avellana HOM05D009546 ORTHO05D014580 1.2e-11 73.9 153 32.7
Haze_13874 Corylus avellana HOM05D016406 ORTHO05D000167 1.2e-11 73.9 174 29.9
TWI23G0529 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.1e-11 73.2 178 31.5
Haze_15802 Corylus avellana HOM05D005192 ORTHO05D006023 2.8e-11 72.8 73 43.8
Haze_13551 Corylus avellana HOM05D000003 ORTHO05D000167 3.6e-11 72.4 111 35.1
Haze_23165 Corylus avellana HOM05D000003 ORTHO05D000167 3.6e-11 72.4 95 33.7
CiPaw.11G073400 Carya illinoinensis HOM05D000003 ORTHO05D000004 4.7e-11 72.0 172 27.3
Haze_12949 Corylus avellana HOM05D000003 ORTHO05D000167 1.4e-10 70.5 160 28.8
CiPaw.16G069900 Carya illinoinensis HOM05D000003 ORTHO05D000004 9.0e-10 67.8 131 32.8
Haze_07857 Corylus avellana HOM05D006860 ORTHO05D009547 1.2e-09 67.4 162 29.0
TWI32G0745 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.2e-09 67.4 122 28.7
QL02p037441 Quercus lobata HOM05D000003 ORTHO05D000167 1.5e-09 67.0 122 32.0
Cfa000480 Carpinus fangiana HOM05D000003 ORTHO05D000167 2.0e-09 66.6 119 29.4
COL.COLO4_20671 Corchorus olitorius HOM05D000003 ORTHO05D000167 2.0e-09 66.6 153 26.1
Haze_05257 Corylus avellana HOM05D009546 ORTHO05D000167 2.0e-09 66.6 154 26.6
Haze_05315 Corylus avellana HOM05D022711 ORTHO05D000126 2.0e-09 66.6 113 30.1
Haze_17656 Corylus avellana HOM05D000003 ORTHO05D000167 2.6e-09 66.2 159 27.0
Haze_18432 Corylus avellana HOM05D014997 ORTHO05D011569 3.4e-09 65.9 120 34.2
Duzib187G0809 Durio zibethinus HOM05D000003 ORTHO05D000167 4.4e-09 65.5 139 31.7
COL.COLO4_35519 Corchorus olitorius HOM05D009774 ORTHO05D000167 5.8e-09 65.1 125 28.0
Haze_00123 Corylus avellana HOM05D003539 ORTHO05D004111 1.3e-08 63.9 66 37.9
Haze_18357 Corylus avellana HOM05D025031 ORTHO05D000167 1.3e-08 63.9 164 31.7
QL09p001270 Quercus lobata HOM05D000003 ORTHO05D000167 1.3e-08 63.9 137 32.1
TWI32G0681 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.3e-08 63.9 178 25.8
TWI53G0004 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.3e-08 63.9 178 25.8
COL.COLO4_05919 Corchorus olitorius HOM05D009774 ORTHO05D000167 2.2e-08 63.2 122 28.7
TWI31G1374 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.2e-08 63.2 178 25.8
TWI14G0340 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 3.8e-08 62.4 178 25.8
TWI74G1173 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 4.9e-08 62.0 122 31.1
Haze_07769 Corylus avellana HOM05D000003 ORTHO05D000167 6.4e-08 61.6 124 30.6
Haze_01518 Corylus avellana HOM05D000003 ORTHO05D044804 1.1e-07 60.8 122 27.9
Haze_19506 Corylus avellana HOM05D000003 ORTHO05D000167 1.1e-07 60.8 96 31.2
Atru.chr5.2480 Acer truncatum HOM05D000003 ORTHO05D000167 1.4e-07 60.5 121 29.8
Haze_16013 Corylus avellana HOM05D000003 ORTHO05D000167 1.9e-07 60.1 122 30.3
TWI09G0364 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 1.9e-07 60.1 122 27.9
QL03p066006 Quercus lobata HOM05D001020 ORTHO05D014173 2.4e-07 59.7 123 29.3
Prupe.6G203400 Prunus persica HOM05D000003 ORTHO05D000167 3.2e-07 59.3 130 29.2
Cfa020990 Carpinus fangiana HOM05D057840 ORTHO05D000167 4.2e-07 58.9 98 35.7
Haze_11065 Corylus avellana HOM05D009031 ORTHO05D000167 4.2e-07 58.9 97 37.1
FvH4_6g18902 Fragaria vesca HOM05D000003 ORTHO05D010713 4.2e-07 58.9 124 29.0
Atru.chr9.177 Acer truncatum HOM05D000003 ORTHO05D000167 5.4e-07 58.5 125 27.2
Atru.chr6.1712 Acer truncatum HOM05D000003 ORTHO05D000167 7.1e-07 58.2 113 31.9
QL04p064882 Quercus lobata HOM05D000003 ORTHO05D000167 7.1e-07 58.2 123 29.3
QL93p0215_0031 Quercus lobata HOM05D000003 ORTHO05D000167 7.1e-07 58.2 123 29.3
Atru.chr12.1232 Acer truncatum HOM05D000003 ORTHO05D000167 9.3e-07 57.8 121 28.1
Atru.chr5.2963 Acer truncatum HOM05D000003 ORTHO05D000006 1.2e-06 57.4 122 30.3
Atru.chr10.1148 Acer truncatum HOM05D000003 ORTHO05D000167 1.6e-06 57.0 103 31.1
CANSAT35G0498 Cannabis sativa HOM05D000003 ORTHO05D000004 1.6e-06 57.0 125 28.8
Haze_19825 Corylus avellana HOM05D009031 ORTHO05D000167 1.6e-06 57.0 68 35.3
TWI77G0924 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 1.6e-06 57.0 140 27.9
Atru.chr11.542 Acer truncatum HOM05D000003 ORTHO05D000167 2.1e-06 56.6 165 25.5
CANSAT01G1968 Cannabis sativa HOM05D000003 ORTHO05D000004 2.1e-06 56.6 129 28.7
QL05p065428 Quercus lobata HOM05D000003 ORTHO05D000004 2.1e-06 56.6 133 28.6
QL11p009033 Quercus lobata HOM05D000003 ORTHO05D000004 2.1e-06 56.6 150 27.3
Atru.chr1.2556 Acer truncatum HOM05D000003 ORTHO05D000004 2.7e-06 56.2 158 29.1
QL02p009216 Quercus lobata HOM05D000003 ORTHO05D000167 2.7e-06 56.2 123 27.6
QL04p056296 Quercus lobata HOM05D000003 ORTHO05D000004 2.7e-06 56.2 146 29.5
TWI63G0799 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 2.7e-06 56.2 122 28.7
CANSAT78G1893 Cannabis sativa HOM05D000003 ORTHO05D000167 3.5e-06 55.8 124 28.2
CANSAT78G2307 Cannabis sativa HOM05D000003 ORTHO05D000167 3.5e-06 55.8 121 25.6
CiPaw.08G150600 Carya illinoinensis HOM05D000003 ORTHO05D000004 3.5e-06 55.8 173 30.1
COL.COLO4_13164 Corchorus olitorius HOM05D009774 ORTHO05D000167 3.5e-06 55.8 129 25.6
Haze_19933 Corylus avellana HOM05D000003 ORTHO05D000167 3.5e-06 55.8 99 26.3
Duzib205G0833 Durio zibethinus HOM05D000003 ORTHO05D000167 3.5e-06 55.8 125 26.4
Atru.chr2.2758 Acer truncatum HOM05D000003 ORTHO05D000167 4.6e-06 55.5 103 34.0
Atru.chr4.686 Acer truncatum HOM05D000003 ORTHO05D000126 4.6e-06 55.5 109 31.2
TAR256G0002 Trochodendron aralioides HOM05D000003 ORTHO05D000167 4.6e-06 55.5 130 28.5
CANSAT01G2509 Cannabis sativa HOM05D000003 ORTHO05D000004 6.0e-06 55.1 123 30.9
CANSAT78G0193 Cannabis sativa HOM05D000003 ORTHO05D000167 6.0e-06 55.1 164 23.8
CiPaw.03G206600 Carya illinoinensis HOM05D000003 ORTHO05D000004 6.0e-06 55.1 128 28.9
CiPaw.05G068400 Carya illinoinensis HOM05D000003 ORTHO05D000004 6.0e-06 55.1 163 26.4
Haze_23663 Corylus avellana HOM05D018234 ORTHO05D000167 6.0e-06 55.1 94 27.7
PSO170G0497 Papaver somniferum HOM05D000003 ORTHO05D000167 6.0e-06 55.1 127 29.1
Atru.chr1.3915 Acer truncatum HOM05D000003 ORTHO05D000167 7.8e-06 54.7 90 33.3
Atru.chr10.2102 Acer truncatum HOM05D000003 ORTHO05D000167 7.8e-06 54.7 105 32.4
Atru.chr3.1768 Acer truncatum HOM05D000003 ORTHO05D000167 7.8e-06 54.7 106 29.2
CANSAT25G1265 Cannabis sativa HOM05D000003 ORTHO05D000167 7.8e-06 54.7 126 27.0
Haze_06429 Corylus avellana HOM05D009031 ORTHO05D000167 7.8e-06 54.7 95 32.6
Haze_19830 Corylus avellana HOM05D009031 ORTHO05D000167 7.8e-06 54.7 74 33.8
QL93p0138_0008 Quercus lobata HOM05D000003 ORTHO05D000167 7.8e-06 54.7 142 28.9


User provided reference genes

Program Settings