Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_25069 Corylus avellana HOM05D004165 ORTHO05D005063 2.2e-271 938.3 474 100.0
Cfa002775 Carpinus fangiana HOM05D004165 ORTHO05D005063 6.4e-226 787.3 465 88.2
QL06p031599 Quercus lobata HOM05D004165 ORTHO05D005063 7.4e-190 667.5 409 82.9
CiPaw.03G132500 Carya illinoinensis HOM05D004165 ORTHO05D005063 1.0e-175 620.5 465 71.0
FAN26G2965 Fragaria x ananassa HOM05D004165 ORTHO05D005063 1.4e-156 557.0 445 65.8
FAN28G2110 Fragaria x ananassa HOM05D004165 ORTHO05D005063 1.1e-153 547.4 411 68.9
FvH4_1g23050 Fragaria vesca HOM05D004165 ORTHO05D005063 2.5e-153 546.2 411 68.6
RcHm_v2.0_Chr2g0117761 Rosa chinensis HOM05D004165 ORTHO05D005063 2.5e-153 546.2 409 69.2
Dinv21242 Davidia involucrata HOM05D004165 ORTHO05D005063 2.7e-152 542.7 412 68.2
FAN23G0468 Fragaria x ananassa HOM05D004165 ORTHO05D005063 3.6e-152 542.3 411 68.4
FAN19G2841 Fragaria x ananassa HOM05D004165 ORTHO05D005063 8.0e-152 541.2 411 68.1
Atru.chr4.460 Acer truncatum HOM05D004165 ORTHO05D005063 2.3e-151 539.7 416 67.5
Prupe.6G168600 Prunus persica HOM05D004165 ORTHO05D005063 8.8e-151 537.7 409 68.2
MD15G1330600 Malus domestica HOM05D004165 ORTHO05D005063 1.7e-149 533.5 409 67.7
CANSAT01G1143 Cannabis sativa HOM05D004165 ORTHO05D005063 3.1e-148 529.3 409 66.0
TAR628G1404 Trochodendron aralioides HOM05D004165 ORTHO05D005063 1.2e-147 527.3 409 67.7
GSVIVG01022256001 Vitis vinifera HOM05D004165 ORTHO05D005063 2.3e-146 523.1 409 66.7
Potri.007G078650 Populus trichocarpa HOM05D004165 ORTHO05D005063 2.9e-146 522.7 408 66.4
Manes.12G144600 Manihot esculenta HOM05D004165 ORTHO05D005063 4.0e-143 512.3 411 63.5
Sabra05G0071000 Salix brachista HOM05D004165 ORTHO05D005063 1.2e-142 510.8 411 64.7
Thecc.01G115900 Theobroma cacao HOM05D004165 ORTHO05D005063 6.3e-141 505.0 412 63.8
Potri.005G086100 Populus trichocarpa HOM05D004165 ORTHO05D005063 1.8e-140 503.4 411 63.7
arahy.Tifrunner.gnm1.ann1.F6TX6D Arachis hypogaea HOM05D004165 ORTHO05D005063 4.5e-139 498.8 412 62.9
arahy.Tifrunner.gnm1.ann1.KAY7L7 Arachis hypogaea HOM05D004165 ORTHO05D005063 4.5e-139 498.8 412 62.9
Duzib147G0774 Durio zibethinus HOM05D004165 ORTHO05D005063 1.0e-138 497.7 413 63.0
CSS0013219 Camellia sinensis var. sinensis HOM05D004165 ORTHO05D005063 3.8e-138 495.7 410 63.7
vmacro12886 Vaccinium macrocarpon HOM05D004165 ORTHO05D005063 4.3e-137 492.3 409 62.3
Glyma.05G185300 Glycine max HOM05D004165 ORTHO05D005063 8.9e-135 484.6 408 60.0
Glyma.08G143200 Glycine max HOM05D004165 ORTHO05D005063 1.2e-134 484.2 408 59.8
Lj4C863G6 Lonicera japonica HOM05D004165 ORTHO05D005063 1.2e-134 484.2 441 59.9
Gohir.D12G093100 Gossypium hirsutum HOM05D004165 ORTHO05D005063 3.7e-133 479.2 412 60.9
Gohir.A12G083100 Gossypium hirsutum HOM05D004165 ORTHO05D005063 8.3e-133 478.0 412 61.2
VMungo0251G1264 Vigna mungo HOM05D004165 ORTHO05D005063 3.2e-132 476.1 438 56.2
Lalb_Chr13g0296271 Lupinus albus HOM05D004165 ORTHO05D005063 5.9e-131 471.9 409 60.1
Ca_17683_v3 Cicer arietinum L. HOM05D004165 ORTHO05D005063 1.3e-130 470.7 418 57.9
Gorai.008G100800 Gossypium raimondii HOM05D004165 ORTHO05D005063 1.3e-130 470.7 422 59.2
Phvul.002G266300 Phaseolus vulgaris HOM05D004165 ORTHO05D005063 1.7e-130 470.3 411 58.4
MBI01_g36155_MAGBIO Magnolia biondii HOM05D004165 ORTHO05D005063 2.3e-130 469.9 449 54.8
TPR.G2248 Trifolium pratense HOM05D004165 ORTHO05D005063 2.5e-129 466.5 412 59.5
Psat7g050200 Pisum sativum HOM05D004165 ORTHO05D005063 9.5e-129 464.5 409 58.9
COL.COLO4_22364 Corchorus olitorius HOM05D004165 ORTHO05D005063 8.9e-127 458.0 413 58.1
Medtr8g092100 Medicago truncatula HOM05D004165 ORTHO05D005063 4.4e-126 455.7 410 57.6
Actinidia28449 Actinidia chinensis HOM05D004165 ORTHO05D005063 8.3e-125 451.4 408 59.1
Nn5g28841 Nelumbo nucifera HOM05D004165 ORTHO05D005063 1.9e-124 450.3 414 56.0
Hma1.2p1_0134F.1_g061540 Hydrangea macrophylla HOM05D004165 ORTHO05D005063 1.2e-123 447.6 416 58.9
Oeu054941.1 Olea europaea HOM05D004165 ORTHO05D005063 1.2e-123 447.6 411 58.4
Lj4g0014922 Lotus japonicus HOM05D004165 ORTHO05D005063 6.0e-123 445.3 409 57.9
MELO3C007461.2 Cucumis melo HOM05D004165 ORTHO05D005063 1.0e-122 444.5 409 57.0
CsaV3_6G042210 Cucumis sativus L. HOM05D004165 ORTHO05D005063 3.0e-122 443.0 409 56.2
Sed0015867 Sechium edule HOM05D004165 ORTHO05D005063 5.6e-121 438.7 410 56.8
ClCG01G015940 Citrullus lanatus HOM05D004165 ORTHO05D005063 4.7e-120 435.6 409 56.0
THA.LOC104804480 Tarenaya hassleriana HOM05D004165 ORTHO05D005063 6.2e-120 435.3 411 58.6
TPR.G2323 Trifolium pratense HOM05D004165 ORTHO05D005063 1.5e-118 430.6 390 59.5
PGR004G2408 Punica granatum HOM05D004165 ORTHO05D005063 1.7e-117 427.2 416 57.0
CARHR247290 Cardamine hirsuta HOM05D004165 ORTHO05D005063 1.9e-116 423.7 409 56.2
AT4G39420 Arabidopsis thaliana HOM05D004165 ORTHO05D005063 4.1e-116 422.5 412 57.8
DCAR_016674 Daucus carota HOM05D004165 ORTHO05D005063 1.6e-115 420.6 416 55.0
AL7G11450 Arabidopsis lyrata HOM05D004165 ORTHO05D005063 4.6e-115 419.1 409 56.5
Thhalv10024179m.g Eutrema salsugineum HOM05D004165 ORTHO05D005063 4.6e-115 419.1 409 56.7
A01p00380 Brassica napus HOM05D004165 ORTHO05D005063 3.9e-114 416.0 408 56.4
BraA01t00046Z Brassica rapa HOM05D004165 ORTHO05D005063 3.9e-114 416.0 408 56.4
C01p00530 Brassica napus HOM05D004165 ORTHO05D005063 5.1e-114 415.6 408 56.4
BolC1t00056H Brassica oleracea HOM05D004165 ORTHO05D005063 8.6e-114 414.8 408 56.1
Aqoxy5G02023 Aquilegia oxysepala HOM05D004165 ORTHO05D005063 1.5e-113 414.1 412 52.2
Nitab4.5_0000184g0120 Nicotiana tabacum HOM05D004165 ORTHO05D005063 2.4e-111 406.8 441 52.6
Sp7g36440 Schrenkiella parvula HOM05D004165 ORTHO05D005063 6.8e-111 405.2 412 56.3
Aa31LG6G15850 Aethionema arabicum HOM05D004165 ORTHO05D005063 8.9e-111 404.8 413 56.2
Solyc04g051570.4 Solanum lycopersicum HOM05D004165 ORTHO05D005063 1.2e-110 404.4 443 51.2
Nitab4.5_0009050g0010 Nicotiana tabacum HOM05D004165 ORTHO05D005063 2.6e-110 403.3 439 51.7
Sopen04g022920 Solanum pennellii HOM05D004165 ORTHO05D005063 1.7e-109 400.6 443 51.0
CAN.G1044.7 Capsicum annuum HOM05D004165 ORTHO05D005063 2.2e-109 400.2 411 54.0
Peaxi162Scf00702g00617 Petunia axillaris HOM05D004165 ORTHO05D005063 3.2e-108 396.4 439 51.9
PSO210G1143 Papaver somniferum HOM05D004165 ORTHO05D005063 1.6e-107 394.0 417 51.8
Carub.0007s0134 Capsella rubella HOM05D004165 ORTHO05D005063 3.9e-106 389.4 409 53.1
MSTRG.23305 Avicennia marina HOM05D004165 ORTHO05D005063 6.6e-106 388.7 412 51.7
PSO170G0015 Papaver somniferum HOM05D004165 ORTHO05D005063 1.1e-105 387.9 412 52.7
Sc03g0004750 Simmondsia chinensis HOM05D004165 ORTHO05D005063 6.9e-103 378.6 415 52.0
Migut.H02450 Erythranthe guttata HOM05D004165 ORTHO05D005063 7.6e-102 375.2 410 50.5
SalBow6G1439 Salvia bowleyana HOM05D004165 ORTHO05D005063 1.3e-101 374.4 411 49.9
EL10Ac6g15255 Beta vulgaris HOM05D004165 ORTHO05D005063 9.3e-100 368.2 445 48.1
AUR62017931 Chenopodium quinoa HOM05D004165 ORTHO05D005063 9.3e-100 368.2 441 47.2
Cc07_g16560 Coffea canephora HOM05D004165 ORTHO05D005063 1.2e-99 367.9 408 50.5
AUR62003622 Chenopodium quinoa HOM05D004165 ORTHO05D005063 3.5e-99 366.3 413 48.9
HanXRQChr08g0218061 Helianthus annuus HOM05D004165 ORTHO05D005063 2.3e-98 363.6 409 50.4
SGA_v2.0_scaffold2G01283 Striga asiatica HOM05D004165 ORTHO05D005063 3.9e-98 362.8 409 48.9
ATR1120G060 Amborella trichopoda HOM05D004165 ORTHO05D005063 1.1e-97 361.3 421 48.7
Lsat_1_v5_gn_9_57180 Lactuca sativa HOM05D004165 ORTHO05D005063 4.8e-96 355.9 408 49.8
ECA233G2130 Erigeron canadensis HOM05D004165 ORTHO05D005063 9.9e-94 348.2 408 47.5
Cpa.g.sc72.15 Carica papaya HOM05D004165 ORTHO05D005063 6.0e-91 339.0 364 52.2
HPP92_013326 Vanilla planifolia HOM05D004165 ORTHO05D005063 5.8e-86 322.4 448 45.1
Ciclev10024679m.g Citrus clementina HOM05D004165 ORTHO05D005063 5.8e-78 295.8 374 46.5
unitig_899.g14615 Utricularia gibba HOM05D004165 ORTHO05D005063 1.8e-74 284.3 413 41.4
SEGI_01323 Sequoiadendron giganteum HOM05D004165 ORTHO05D005063 2.3e-74 283.9 426 41.5
SHI11785 Sapria himalayana HOM05D004165 ORTHO05D005063 3.3e-73 280.0 342 48.2
CDE07G1357 Ceratophyllum demersum HOM05D004165 ORTHO05D005063 4.8e-72 276.2 437 40.3
Zm00001eb062420 Zea mays HOM05D004165 ORTHO05D005063 1.9e-68 264.2 421 40.9
Mapoly0066s0021 Marchantia polymorpha HOM05D004165 ORTHO05D005063 4.4e-57 226.5 439 35.3
Pp3c3_30110 Physcomitrium patens HOM05D004165 ORTHO05D005063 1.1e-44 185.3 479 31.3
Pp3c10_13600 Physcomitrium patens HOM05D004165 ORTHO05D005063 3.6e-43 180.3 481 31.2
Pp3c7_14700 Physcomitrium patens HOM05D004165 ORTHO05D005063 1.2e-41 175.3 434 31.6
CBR_g5608 Chara braunii HOM05D004165 ORTHO05D005063 1.6e-22 111.7 381 28.1
AagrBONN_evm.TU.Sc2ySwM_344.5500 Anthoceros agrestis HOM05D004165 ORTHO05D005063 5.0e-21 106.7 336 29.5
Lsat_1_v5_gn_6_660 Lactuca sativa HOM05D003133 ORTHO05D003642 5.4e-07 60.1 67 44.8


User provided reference genes

Program Settings