Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_24882 Corylus avellana HOM05D006096 ORTHO05D007775 3.1e-226 788.1 398 100.0
Haze_24873 Corylus avellana HOM05D006096 ORTHO05D007775 3.2e-170 602.1 398 81.4
Cfa002624 Carpinus fangiana HOM05D006096 ORTHO05D007775 6.3e-110 401.7 362 65.7
FAN19G2919 Fragaria x ananassa HOM05D006096 ORTHO05D007775 3.6e-105 386.0 409 53.8
Prupe.6G191000 Prunus persica HOM05D006096 ORTHO05D007775 1.0e-104 384.4 462 50.2
Duzib187G1253 Durio zibethinus HOM05D006096 ORTHO05D007775 2.3e-104 383.3 459 49.7
RcHm_v2.0_Chr2g0112761 Rosa chinensis HOM05D006096 ORTHO05D007775 1.2e-103 380.9 462 49.8
MD01G1033500 Malus domestica HOM05D006096 ORTHO05D007775 3.4e-103 379.4 463 49.9
Atru.chr3.1373 Acer truncatum HOM05D006096 ORTHO05D007775 4.1e-101 372.5 467 49.0
TWI53G1189 Tripterygium wilfordii HOM05D006096 ORTHO05D007775 1.2e-100 370.9 461 48.4
vmacro18587 Vaccinium macrocarpon HOM05D006096 ORTHO05D007775 2.7e-100 369.8 458 49.3
Rhsim08G0012600 Rhododendron simsii HOM05D006096 ORTHO05D007775 3.5e-100 369.4 434 50.9
Gorai.011G113400 Gossypium raimondii HOM05D006096 ORTHO05D007775 8.6e-99 364.8 463 47.9
Gohir.A10G085100 Gossypium hirsutum HOM05D006096 ORTHO05D007775 1.9e-98 363.6 463 47.3
CSS0046442 Camellia sinensis var. sinensis HOM05D006096 ORTHO05D007775 3.3e-98 362.8 472 48.7
FvH4_1g20510 Fragaria vesca HOM05D006096 ORTHO05D007775 4.3e-98 362.5 465 47.5
Sabra05G0060100 Salix brachista HOM05D006096 ORTHO05D007775 2.3e-96 356.7 419 51.3
Nn1g05418 Nelumbo nucifera HOM05D006096 ORTHO05D007775 2.0e-95 353.6 467 46.0
COL.COLO4_27275 Corchorus olitorius HOM05D006096 ORTHO05D007775 2.6e-95 353.2 452 49.1
Cpa.g.sc55.89 Carica papaya HOM05D006096 ORTHO05D007775 2.9e-94 349.7 459 47.7
MBI02_g02177_MAGBIO Magnolia biondii HOM05D006096 ORTHO05D007775 3.2e-93 346.3 467 46.9
Lsat_1_v5_gn_5_34320 Lactuca sativa HOM05D006096 ORTHO05D007775 3.5e-92 342.8 455 45.7
Potri.005G073600 Populus trichocarpa HOM05D006096 ORTHO05D007775 4.6e-92 342.4 466 46.6
Eucgr.H04751 Eucalyptus grandis HOM05D006096 ORTHO05D007775 3.0e-91 339.7 459 44.9
Lalb_Chr19g0127391 Lupinus albus HOM05D006096 ORTHO05D007775 6.6e-91 338.6 453 46.8
ECA246G2908 Erigeron canadensis HOM05D006096 ORTHO05D007775 2.5e-90 336.7 442 46.4
QL06p048506 Quercus lobata HOM05D006096 ORTHO05D007775 2.5e-90 336.7 350 56.3
Sed0027583 Sechium edule HOM05D006096 ORTHO05D007775 2.5e-90 336.7 450 47.3
Glyma.18G015800 Glycine max HOM05D006096 ORTHO05D007775 4.3e-90 335.9 452 47.1
Actinidia28854 Actinidia chinensis HOM05D006096 ORTHO05D007775 5.6e-90 335.5 449 48.6
Lj6g0005810 Lotus japonicus HOM05D006096 ORTHO05D007775 2.1e-89 333.6 458 46.1
TAR625G1553 Trochodendron aralioides HOM05D006096 ORTHO05D007775 2.1e-89 333.6 415 49.2
arahy.Tifrunner.gnm1.ann1.DD3ZZY Arachis hypogaea HOM05D006096 ORTHO05D007775 2.8e-89 333.2 473 46.1
Sc16g0000180 Simmondsia chinensis HOM05D006096 ORTHO05D007775 3.6e-89 332.8 462 46.1
arahy.Tifrunner.gnm1.ann1.C4UPUA Arachis hypogaea HOM05D006096 ORTHO05D007775 6.2e-89 332.0 458 46.5
Medtr3g087010 Medicago truncatula HOM05D006096 ORTHO05D007775 1.8e-88 330.5 447 44.5
QL06p048476 Quercus lobata HOM05D006096 ORTHO05D007775 1.8e-88 330.5 445 48.3
EL10Ac6g15136 Beta vulgaris HOM05D006096 ORTHO05D007775 2.3e-88 330.1 488 44.1
Phvul.001G253200 Phaseolus vulgaris HOM05D006096 ORTHO05D007775 2.3e-88 330.1 450 45.3
Cc07_g14840 Coffea canephora HOM05D006096 ORTHO05D007775 6.8e-88 328.6 467 43.9
TPR.G15994 Trifolium pratense HOM05D006096 ORTHO05D007775 5.8e-87 325.5 447 44.1
VMungo1383G2853 Vigna mungo HOM05D006096 ORTHO05D007775 5.8e-87 325.5 451 44.1
Psat5g090600 Pisum sativum HOM05D006096 ORTHO05D007775 7.6e-87 325.1 447 44.7
AT5G10320 Arabidopsis thaliana HOM05D006096 ORTHO05D007775 9.9e-87 324.7 458 45.4
Glyma.11G241200 Glycine max HOM05D006096 ORTHO05D007775 9.9e-87 324.7 452 45.6
PGSC0003DMG400016160 Solanum tuberosum HOM05D006096 ORTHO05D007775 1.7e-86 323.9 467 45.0
CANSAT01G2346 Cannabis sativa HOM05D006096 ORTHO05D007775 2.9e-86 323.2 503 42.5
AUR62001986 Chenopodium quinoa HOM05D006096 ORTHO05D007775 3.7e-86 322.8 482 43.8
BolC9t59480H Brassica oleracea HOM05D006096 ORTHO05D007775 6.4e-86 322.0 456 44.3
AL6G20820 Arabidopsis lyrata HOM05D006096 ORTHO05D007775 8.3e-86 321.6 456 45.6
BcaC04g19312 Brassica carinata HOM05D006096 ORTHO05D007775 5.4e-85 318.9 450 44.2
Sopen11g004830 Solanum pennellii HOM05D006096 ORTHO05D007775 7.1e-85 318.5 465 45.6
CiPaw.03G143900 Carya illinoinensis HOM05D006096 ORTHO05D007775 2.1e-84 317.0 354 55.6
Aqoxy6G00746 Aquilegia oxysepala HOM05D006096 ORTHO05D007775 2.7e-84 316.6 455 42.9
Peaxi162Scf00381g01013 Petunia axillaris HOM05D006096 ORTHO05D007775 7.8e-84 315.1 464 44.2
Hund13600 Selenicereus undatus HOM05D006096 ORTHO05D007775 1.3e-83 314.3 511 40.5
A10p27260 Brassica napus HOM05D006096 ORTHO05D007775 1.1e-82 311.2 460 43.5
C09p67070 Brassica napus HOM05D006096 ORTHO05D007775 1.1e-82 311.2 460 43.5
BraA10t44776Z Brassica rapa HOM05D006096 ORTHO05D007775 2.5e-82 310.1 461 43.2
PSO210G0897 Papaver somniferum HOM05D006096 ORTHO05D007775 1.6e-81 307.4 455 43.7
FAN28G1526 Fragaria x ananassa HOM05D006096 ORTHO05D007775 2.1e-81 307.0 407 47.4
FAN23G0863 Fragaria x ananassa HOM05D006096 ORTHO05D007775 8.1e-81 305.1 465 42.2
SalBow3G4176 Salvia bowleyana HOM05D006096 ORTHO05D007775 1.1e-80 304.7 451 41.7
Migut.H02345 Erythranthe guttata HOM05D006096 ORTHO05D007775 5.2e-80 302.4 441 43.1
BcaB08g37116 Brassica carinata HOM05D006096 ORTHO05D007775 1.5e-79 300.8 457 42.7
Aa31LG3G16830 Aethionema arabicum HOM05D006096 ORTHO05D007775 2.6e-79 300.1 448 43.1
Oeu033049.1 Olea europaea HOM05D006096 ORTHO05D007775 1.4e-77 294.3 420 42.9
CAN.G905.37 Capsicum annuum HOM05D006096 ORTHO05D007775 7.1e-77 292.0 429 44.3
ATR0684G225 Amborella trichopoda HOM05D006096 ORTHO05D007775 1.9e-74 283.9 470 40.2
ClCG07G017370 Citrullus lanatus HOM05D006096 ORTHO05D007775 6.9e-72 275.4 573 36.6
BcaC04g19315 Brassica carinata HOM05D006096 ORTHO05D007775 7.9e-68 261.9 332 48.5
Os04g0451100 Oryza sativa ssp. japonica HOM05D006096 ORTHO05D007775 3.3e-66 256.5 466 37.8
Thhalv10013818m.g Eutrema salsugineum HOM05D006096 ORTHO05D007775 1.3e-65 254.6 460 37.6
Manes.13G095500 Manihot esculenta HOM05D006096 ORTHO05D007775 2.8e-65 253.4 352 45.5
AUR62003818 Chenopodium quinoa HOM05D006096 ORTHO05D007775 1.5e-63 247.7 291 51.5
Thecc.01G097900 Theobroma cacao HOM05D006096 ORTHO05D007775 9.9e-63 245.0 348 46.0
Dinv08841 Davidia involucrata HOM05D006096 ORTHO05D007775 1.7e-62 244.2 353 45.9
PSO447G0355 Papaver somniferum HOM05D006096 ORTHO05D007775 4.9e-62 242.7 454 37.7
CARHR202960 Cardamine hirsuta HOM05D006096 ORTHO05D007775 1.1e-61 241.5 322 45.7
CsaV3_4G004600 Cucumis sativus L. HOM05D006096 ORTHO05D007775 2.4e-61 240.4 317 46.4
HPP92_011214 Vanilla planifolia HOM05D006096 ORTHO05D007775 3.2e-61 240.0 466 36.9
Ciclev10026196m.g Citrus clementina HOM05D006096 ORTHO05D007775 6.0e-60 235.7 354 44.9
CsaV3_UNG122970 Cucumis sativus L. HOM05D006096 ORTHO05D007775 1.5e-58 231.1 341 43.1
CARHR202970 Cardamine hirsuta HOM05D006096 ORTHO05D007775 5.6e-58 229.2 329 43.8
SGA_v2.0_scaffold111G31503 Striga asiatica HOM05D006096 ORTHO05D007775 1.6e-57 227.6 450 37.1
Zm00001eb081250 Zea mays HOM05D006096 ORTHO05D007775 3.7e-57 226.5 320 43.1
Gohir.D10G103900 Gossypium hirsutum HOM05D006096 ORTHO05D007775 5.3e-56 222.6 351 43.0
Ca_16518_v3 Cicer arietinum L. HOM05D006096 ORTHO05D007775 1.2e-55 221.5 323 43.3
Nitab4.5_0004570g0020 Nicotiana tabacum HOM05D006096 ORTHO05D007775 6.5e-54 215.7 345 42.3
CsaV3_UNG160190 Cucumis sativus L. HOM05D006096 ORTHO05D007775 1.3e-51 208.0 240 50.0
HanXRQChr02g0032011 Helianthus annuus HOM05D006096 ORTHO05D007775 2.8e-49 200.3 326 42.0
MELO3C017606.2 Cucumis melo HOM05D006096 ORTHO05D007775 5.3e-48 196.1 603 30.0
unitig_899.g14550 Utricularia gibba HOM05D006096 ORTHO05D007775 9.0e-48 195.3 492 33.3
Pp3c26_3770 Physcomitrium patens HOM05D006096 ORTHO05D007775 3.8e-46 189.9 461 33.0
DCAR_014211 Daucus carota HOM05D006096 ORTHO05D007775 1.1e-45 188.3 310 40.6
SMO301G0024 Selaginella moellendorffii HOM05D006096 ORTHO05D007775 9.3e-45 185.3 215 49.8
MSTRG.23356 Avicennia marina HOM05D006096 ORTHO05D007775 3.5e-44 183.3 270 41.5
QL06p048511 Quercus lobata HOM05D006096 ORTHO05D007775 2.3e-43 180.6 96 90.6
Solyc11g009060.2 Solanum lycopersicum HOM05D006096 ORTHO05D007775 2.3e-43 180.6 354 39.0
Sp6g33110 Schrenkiella parvula HOM05D006096 ORTHO05D007775 7.4e-42 175.6 348 37.1
Carub.0006s0879 Capsella rubella HOM05D006096 ORTHO05D007775 1.5e-39 167.9 310 38.1
Mapoly0077s0016 Marchantia polymorpha HOM05D006096 ORTHO05D007775 1.7e-38 164.5 510 28.6
Nitab4.5_0000743g0130 Nicotiana tabacum HOM05D006096 ORTHO05D007775 1.4e-37 161.4 398 31.9
GSVIVG01006632001 Vitis vinifera HOM05D006096 ORTHO05D007775 6.1e-36 156.0 106 69.8
Pp3c3_14090 Physcomitrium patens HOM05D006096 ORTHO05D007775 1.0e-35 155.2 443 30.5
CDE06G0254 Ceratophyllum demersum HOM05D006096 ORTHO05D007775 5.7e-34 149.4 422 28.4
HanXRQChr15g0477621 Helianthus annuus HOM05D006096 ORTHO05D007775 2.8e-33 147.1 331 33.2
CBR_g26374 Chara braunii HOM05D006096 ORTHO05D007775 3.7e-33 146.7 202 44.1
CBR_g53530 Chara braunii HOM05D006096 ORTHO05D007775 2.4e-32 144.1 212 39.2
CsaV3_UNG223570 Cucumis sativus L. HOM05D006096 ORTHO05D007775 2.9e-30 137.1 91 69.2
Gohir.D10G103800 Gossypium hirsutum HOM05D006096 ORTHO05D007775 7.2e-29 132.5 84 72.6
Carub.0006s0878 Capsella rubella HOM05D006096 ORTHO05D007775 1.4e-24 118.2 97 61.9
CARHR202980 Cardamine hirsuta HOM05D006096 ORTHO05D007775 1.2e-23 115.2 270 32.6
AagrBONN_evm.TU.Sc2ySwM_344.1220 Anthoceros agrestis HOM05D006096 ORTHO05D007775 4.2e-21 106.7 347 29.7
HanXRQChr02g0032001 Helianthus annuus HOM05D006096 ORTHO05D007775 4.7e-20 103.2 66 74.2
BcaB02g08416 Brassica carinata HOM05D006096 ORTHO05D007775 8.0e-20 102.4 99 58.6
Ah.02g123840 Amaranthus hybridus HOM05D006096 ORTHO05D007775 2.3e-19 100.9 67 70.1
SEGI_02986 Sequoiadendron giganteum HOM05D006096 ORTHO05D007775 2.9e-14 84.0 61 62.3
Cre17.g719050 Chlamydomonas reinhardtii HOM05D006096 ORTHO05D007775 7.2e-13 79.3 214 29.4
CsaV3_UNG160180 Cucumis sativus L. HOM05D006096 ORTHO05D007775 3.6e-12 77.0 112 43.8
CsaV3_UNG124970 Cucumis sativus L. HOM05D006096 ORTHO05D007775 1.4e-11 75.1 67 55.2
Actinidia28243 Actinidia chinensis HOM05D006096 ORTHO05D009823 9.8e-10 68.9 364 29.9
RcHm_v2.0_Chr4g0406191 Rosa chinensis HOM05D006096 ORTHO05D007775 5.4e-08 63.2 65 55.4
Nitab4.5_0004570g0030 Nicotiana tabacum HOM05D006096 ORTHO05D007775 9.1e-08 62.4 80 40.0


User provided reference genes

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